data_2D6C
#
_model_server_result.job_id            jLLvqOAJTWBTwkLyaiQjTQ 
_model_server_result.datetime_utc      '2024-10-10 17:11:23' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2d6c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":155}' 
#
_entry.id    2D6C 
#
_exptl.entry_id    2D6C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              69.085 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            IMIDAZOLE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          110.88 
_cell.angle_gamma         90 
_cell.entry_id            2D6C 
_cell.length_a            42.533 
_cell.length_b            79.902 
_cell.length_c            54.619 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2D6C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 93 A HIS 93 1_555 C FE HME . A HME 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? 
metalc ? metalc2 C FE HME . A HME 154 1_555 D N1 IMD . A IMD 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? 
metalc ? metalc3 B NE2 HIS 93 B HIS 93 1_555 E FE HME . B HME 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc4 E FE HME . B HME 154 1_555 F N1 IMD . B IMD 155 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? 
#
_chem_comp.formula           'C3 H5 N2 1' 
_chem_comp.formula_weight    69.085 
_chem_comp.id                IMD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              IMIDAZOLE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IMD sing 246 n y 
N1 C5 IMD sing 247 n y 
N1 HN1 IMD sing 248 n n 
C2 N3 IMD doub 249 n y 
C2 H2 IMD sing 250 n n 
N3 C4 IMD sing 251 n y 
N3 HN3 IMD sing 252 n n 
C4 C5 IMD doub 253 n y 
C4 H4 IMD sing 254 n n 
C5 H5 IMD sing 255 n n 
#
_atom_sites.entry_id                     2D6C 
_atom_sites.fract_transf_matrix[1][1]    0.023511 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.008969 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012515 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.019596 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HME A 1 154 154 HME UNK . 
D 3 IMD A 1 155 155 IMD IMD . 
E 2 HME B 1 154 154 HME UNK . 
F 3 IMD B 1 155 155 IMD IMD . 
G 4 HOH A 1 156 1 HOH HOH . 
G 4 HOH A 2 157 3 HOH HOH . 
G 4 HOH A 3 158 4 HOH HOH . 
G 4 HOH A 4 159 5 HOH HOH . 
G 4 HOH A 5 160 7 HOH HOH . 
G 4 HOH A 6 161 10 HOH HOH . 
G 4 HOH A 7 162 12 HOH HOH . 
G 4 HOH A 8 163 14 HOH HOH . 
G 4 HOH A 9 164 15 HOH HOH . 
G 4 HOH A 10 165 16 HOH HOH . 
G 4 HOH A 11 166 17 HOH HOH . 
G 4 HOH A 12 167 22 HOH HOH . 
G 4 HOH A 13 168 24 HOH HOH . 
G 4 HOH A 14 169 25 HOH HOH . 
G 4 HOH A 15 170 26 HOH HOH . 
G 4 HOH A 16 171 28 HOH HOH . 
G 4 HOH A 17 172 29 HOH HOH . 
G 4 HOH A 18 173 32 HOH HOH . 
G 4 HOH A 19 174 33 HOH HOH . 
G 4 HOH A 20 175 35 HOH HOH . 
G 4 HOH A 21 176 36 HOH HOH . 
G 4 HOH A 22 177 38 HOH HOH . 
G 4 HOH A 23 178 39 HOH HOH . 
G 4 HOH A 24 179 42 HOH HOH . 
G 4 HOH A 25 180 44 HOH HOH . 
G 4 HOH A 26 181 46 HOH HOH . 
G 4 HOH A 27 182 49 HOH HOH . 
G 4 HOH A 28 183 51 HOH HOH . 
G 4 HOH A 29 184 53 HOH HOH . 
G 4 HOH A 30 185 55 HOH HOH . 
G 4 HOH A 31 186 56 HOH HOH . 
G 4 HOH A 32 187 58 HOH HOH . 
G 4 HOH A 33 188 60 HOH HOH . 
G 4 HOH A 34 189 61 HOH HOH . 
G 4 HOH A 35 190 62 HOH HOH . 
G 4 HOH A 36 191 63 HOH HOH . 
G 4 HOH A 37 192 66 HOH HOH . 
G 4 HOH A 38 193 67 HOH HOH . 
G 4 HOH A 39 194 68 HOH HOH . 
G 4 HOH A 40 195 69 HOH HOH . 
G 4 HOH A 41 196 70 HOH HOH . 
G 4 HOH A 42 197 72 HOH HOH . 
G 4 HOH A 43 198 75 HOH HOH . 
G 4 HOH A 44 199 78 HOH HOH . 
G 4 HOH A 45 200 81 HOH HOH . 
G 4 HOH A 46 201 82 HOH HOH . 
G 4 HOH A 47 202 83 HOH HOH . 
G 4 HOH A 48 203 85 HOH HOH . 
G 4 HOH A 49 204 86 HOH HOH . 
G 4 HOH A 50 205 90 HOH HOH . 
G 4 HOH A 51 206 92 HOH HOH . 
G 4 HOH A 52 207 94 HOH HOH . 
G 4 HOH A 53 208 95 HOH HOH . 
G 4 HOH A 54 209 96 HOH HOH . 
G 4 HOH A 55 210 99 HOH HOH . 
G 4 HOH A 56 211 102 HOH HOH . 
G 4 HOH A 57 212 105 HOH HOH . 
G 4 HOH A 58 213 106 HOH HOH . 
G 4 HOH A 59 214 109 HOH HOH . 
G 4 HOH A 60 215 110 HOH HOH . 
G 4 HOH A 61 216 111 HOH HOH . 
G 4 HOH A 62 217 113 HOH HOH . 
G 4 HOH A 63 218 114 HOH HOH . 
G 4 HOH A 64 219 115 HOH HOH . 
G 4 HOH A 65 220 116 HOH HOH . 
G 4 HOH A 66 221 118 HOH HOH . 
G 4 HOH A 67 222 120 HOH HOH . 
G 4 HOH A 68 223 122 HOH HOH . 
G 4 HOH A 69 224 124 HOH HOH . 
G 4 HOH A 70 225 127 HOH HOH . 
G 4 HOH A 71 226 129 HOH HOH . 
G 4 HOH A 72 227 130 HOH HOH . 
G 4 HOH A 73 228 132 HOH HOH . 
G 4 HOH A 74 229 133 HOH HOH . 
G 4 HOH A 75 230 138 HOH HOH . 
G 4 HOH A 76 231 140 HOH HOH . 
G 4 HOH A 77 232 141 HOH HOH . 
G 4 HOH A 78 233 144 HOH HOH . 
G 4 HOH A 79 234 145 HOH HOH . 
G 4 HOH A 80 235 146 HOH HOH . 
G 4 HOH A 81 236 147 HOH HOH . 
G 4 HOH A 82 237 148 HOH HOH . 
G 4 HOH A 83 238 152 HOH HOH . 
G 4 HOH A 84 239 153 HOH HOH . 
G 4 HOH A 85 240 154 HOH HOH . 
G 4 HOH A 86 241 156 HOH HOH . 
G 4 HOH A 87 242 160 HOH HOH . 
G 4 HOH A 88 243 164 HOH HOH . 
G 4 HOH A 89 244 166 HOH HOH . 
G 4 HOH A 90 245 168 HOH HOH . 
G 4 HOH A 91 246 169 HOH HOH . 
G 4 HOH A 92 247 170 HOH HOH . 
G 4 HOH A 93 248 171 HOH HOH . 
G 4 HOH A 94 249 172 HOH HOH . 
G 4 HOH A 95 250 174 HOH HOH . 
G 4 HOH A 96 251 175 HOH HOH . 
G 4 HOH A 97 252 178 HOH HOH . 
G 4 HOH A 98 253 180 HOH HOH . 
G 4 HOH A 99 254 182 HOH HOH . 
G 4 HOH A 100 255 184 HOH HOH . 
G 4 HOH A 101 256 185 HOH HOH . 
G 4 HOH A 102 257 186 HOH HOH . 
G 4 HOH A 103 258 187 HOH HOH . 
G 4 HOH A 104 259 189 HOH HOH . 
G 4 HOH A 105 260 190 HOH HOH . 
G 4 HOH A 106 261 191 HOH HOH . 
G 4 HOH A 107 262 192 HOH HOH . 
G 4 HOH A 108 263 193 HOH HOH . 
G 4 HOH A 109 264 194 HOH HOH . 
G 4 HOH A 110 265 195 HOH HOH . 
G 4 HOH A 111 266 196 HOH HOH . 
G 4 HOH A 112 267 197 HOH HOH . 
G 4 HOH A 113 268 198 HOH HOH . 
G 4 HOH A 114 269 204 HOH HOH . 
G 4 HOH A 115 270 205 HOH HOH . 
G 4 HOH A 116 271 206 HOH HOH . 
G 4 HOH A 117 272 207 HOH HOH . 
G 4 HOH A 118 273 210 HOH HOH . 
G 4 HOH A 119 274 212 HOH HOH . 
G 4 HOH A 120 275 214 HOH HOH . 
G 4 HOH A 121 276 216 HOH HOH . 
G 4 HOH A 122 277 217 HOH HOH . 
G 4 HOH A 123 278 219 HOH HOH . 
G 4 HOH A 124 279 220 HOH HOH . 
G 4 HOH A 125 280 221 HOH HOH . 
G 4 HOH A 126 281 222 HOH HOH . 
G 4 HOH A 127 282 224 HOH HOH . 
G 4 HOH A 128 283 225 HOH HOH . 
H 4 HOH B 1 156 2 HOH HOH . 
H 4 HOH B 2 157 6 HOH HOH . 
H 4 HOH B 3 158 8 HOH HOH . 
H 4 HOH B 4 159 9 HOH HOH . 
H 4 HOH B 5 160 11 HOH HOH . 
H 4 HOH B 6 161 13 HOH HOH . 
H 4 HOH B 7 162 18 HOH HOH . 
H 4 HOH B 8 163 19 HOH HOH . 
H 4 HOH B 9 164 20 HOH HOH . 
H 4 HOH B 10 165 21 HOH HOH . 
H 4 HOH B 11 166 23 HOH HOH . 
H 4 HOH B 12 167 27 HOH HOH . 
H 4 HOH B 13 168 30 HOH HOH . 
H 4 HOH B 14 169 31 HOH HOH . 
H 4 HOH B 15 170 34 HOH HOH . 
H 4 HOH B 16 171 37 HOH HOH . 
H 4 HOH B 17 172 40 HOH HOH . 
H 4 HOH B 18 173 41 HOH HOH . 
H 4 HOH B 19 174 43 HOH HOH . 
H 4 HOH B 20 175 45 HOH HOH . 
H 4 HOH B 21 176 47 HOH HOH . 
H 4 HOH B 22 177 48 HOH HOH . 
H 4 HOH B 23 178 50 HOH HOH . 
H 4 HOH B 24 179 52 HOH HOH . 
H 4 HOH B 25 180 54 HOH HOH . 
H 4 HOH B 26 181 57 HOH HOH . 
H 4 HOH B 27 182 59 HOH HOH . 
H 4 HOH B 28 183 64 HOH HOH . 
H 4 HOH B 29 184 65 HOH HOH . 
H 4 HOH B 30 185 71 HOH HOH . 
H 4 HOH B 31 186 73 HOH HOH . 
H 4 HOH B 32 187 74 HOH HOH . 
H 4 HOH B 33 188 76 HOH HOH . 
H 4 HOH B 34 189 77 HOH HOH . 
H 4 HOH B 35 190 79 HOH HOH . 
H 4 HOH B 36 191 80 HOH HOH . 
H 4 HOH B 37 192 84 HOH HOH . 
H 4 HOH B 38 193 87 HOH HOH . 
H 4 HOH B 39 194 88 HOH HOH . 
H 4 HOH B 40 195 89 HOH HOH . 
H 4 HOH B 41 196 91 HOH HOH . 
H 4 HOH B 42 197 93 HOH HOH . 
H 4 HOH B 43 198 97 HOH HOH . 
H 4 HOH B 44 199 98 HOH HOH . 
H 4 HOH B 45 200 100 HOH HOH . 
H 4 HOH B 46 201 101 HOH HOH . 
H 4 HOH B 47 202 103 HOH HOH . 
H 4 HOH B 48 203 104 HOH HOH . 
H 4 HOH B 49 204 107 HOH HOH . 
H 4 HOH B 50 205 108 HOH HOH . 
H 4 HOH B 51 206 112 HOH HOH . 
H 4 HOH B 52 207 117 HOH HOH . 
H 4 HOH B 53 208 119 HOH HOH . 
H 4 HOH B 54 209 121 HOH HOH . 
H 4 HOH B 55 210 123 HOH HOH . 
H 4 HOH B 56 211 125 HOH HOH . 
H 4 HOH B 57 212 126 HOH HOH . 
H 4 HOH B 58 213 128 HOH HOH . 
H 4 HOH B 59 214 131 HOH HOH . 
H 4 HOH B 60 215 134 HOH HOH . 
H 4 HOH B 61 216 135 HOH HOH . 
H 4 HOH B 62 217 136 HOH HOH . 
H 4 HOH B 63 218 137 HOH HOH . 
H 4 HOH B 64 219 139 HOH HOH . 
H 4 HOH B 65 220 142 HOH HOH . 
H 4 HOH B 66 221 143 HOH HOH . 
H 4 HOH B 67 222 149 HOH HOH . 
H 4 HOH B 68 223 150 HOH HOH . 
H 4 HOH B 69 224 151 HOH HOH . 
H 4 HOH B 70 225 155 HOH HOH . 
H 4 HOH B 71 226 157 HOH HOH . 
H 4 HOH B 72 227 158 HOH HOH . 
H 4 HOH B 73 228 159 HOH HOH . 
H 4 HOH B 74 229 161 HOH HOH . 
H 4 HOH B 75 230 162 HOH HOH . 
H 4 HOH B 76 231 163 HOH HOH . 
H 4 HOH B 77 232 165 HOH HOH . 
H 4 HOH B 78 233 167 HOH HOH . 
H 4 HOH B 79 234 173 HOH HOH . 
H 4 HOH B 80 235 176 HOH HOH . 
H 4 HOH B 81 236 177 HOH HOH . 
H 4 HOH B 82 237 179 HOH HOH . 
H 4 HOH B 83 238 181 HOH HOH . 
H 4 HOH B 84 239 183 HOH HOH . 
H 4 HOH B 85 240 188 HOH HOH . 
H 4 HOH B 86 241 199 HOH HOH . 
H 4 HOH B 87 242 200 HOH HOH . 
H 4 HOH B 88 243 201 HOH HOH . 
H 4 HOH B 89 244 202 HOH HOH . 
H 4 HOH B 90 245 203 HOH HOH . 
H 4 HOH B 91 246 208 HOH HOH . 
H 4 HOH B 92 247 209 HOH HOH . 
H 4 HOH B 93 248 211 HOH HOH . 
H 4 HOH B 94 249 213 HOH HOH . 
H 4 HOH B 95 250 215 HOH HOH . 
H 4 HOH B 96 251 218 HOH HOH . 
H 4 HOH B 97 252 223 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IMD . . . D 3 6.285 -6.88 19.595 1 24.86 ? N1 IMD 155 A 1 
HETATM 2 C C2 IMD . . . D 3 5.031 -6.831 20.028 1 36.96 ? C2 IMD 155 A 1 
HETATM 3 N N3 IMD . . . D 3 4.366 -6.01 19.232 1 43.85 ? N3 IMD 155 A 1 
HETATM 4 C C4 IMD . . . D 3 5.204 -5.544 18.299 1 40.4 ? C4 IMD 155 A 1 
HETATM 5 C C5 IMD . . . D 3 6.439 -6.103 18.53 1 30.97 ? C5 IMD 155 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           5 
#