data_2DA8 # _model_server_result.job_id U9jmEUiCyqkNhqGyA9xbFA _model_server_result.datetime_utc '2024-10-18 16:28:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2da8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":0}' # _entry.id 2DA8 # _exptl.entry_id 2DA8 _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 174.156 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-CARBOXYQUINOXALINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2DA8 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DA8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG NCY 3 A NCY 3 1_555 A SG NCY 7 A NCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale1 D C QUI . A QUI 0 1_555 A N DSN 1 A DSN 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C DSN 1 A DSN 1 1_555 A N ALA 2 A ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale3 A OG DSN 1 A DSN 1 1_555 A C VAL 8 A VAL 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale4 A C ALA 2 A ALA 2 1_555 A N NCY 3 A NCY 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale5 A C NCY 3 A NCY 3 1_555 A N VAL 4 A VAL 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale6 A C VAL 4 A VAL 4 1_555 A OG DSN 5 A DSN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 A C DSN 5 A DSN 5 1_555 A N ALA 6 A ALA 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale8 A N DSN 5 A DSN 5 1_555 E C QUI . A QUI 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale9 A C ALA 6 A ALA 6 1_555 A N NCY 7 A NCY 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale10 A C NCY 7 A NCY 7 1_555 A N VAL 8 A VAL 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.306 ? hydrog WATSON-CRICK hydrog1 B N1 DG 1 C DG 1 1_555 C N3 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 B N2 DG 1 C DG 1 1_555 C O2 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 B O6 DG 1 C DG 1 1_555 C N4 DC 6 D DC 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 B N1 DA 2 C DA 2 1_555 C N3 DT 5 D DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 B N6 DA 2 C DA 2 1_555 C O4 DT 5 D DT 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 B N3 DT 3 C DT 3 1_555 C N1 DA 4 D DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 B O4 DT 3 C DT 3 1_555 C N6 DA 4 D DA 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 B N1 DA 4 C DA 4 1_555 C N3 DT 3 D DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 B N6 DA 4 C DA 4 1_555 C O4 DT 3 D DT 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 B N3 DT 5 C DT 5 1_555 C N1 DA 2 D DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 B O4 DT 5 C DT 5 1_555 C N6 DA 2 D DA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 B N3 DC 6 C DC 6 1_555 C N1 DG 1 D DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 B N4 DC 6 C DC 6 1_555 C O6 DG 1 D DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 B O2 DC 6 C DC 6 1_555 C N2 DG 1 D DG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C9 H6 N2 O2' _chem_comp.formula_weight 174.156 _chem_comp.id QUI _chem_comp.mon_nstd_flag . _chem_comp.name 2-CARBOXYQUINOXALINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 QUI doub 212 n y N1 C9 QUI sing 213 n y C2 C3 QUI sing 214 n y C2 C QUI sing 215 n n C3 N4 QUI doub 216 n y C3 H3 QUI sing 217 n n N4 C10 QUI sing 218 n y C5 C6 QUI doub 219 n y C5 C10 QUI sing 220 n y C5 H5 QUI sing 221 n n C6 C7 QUI sing 222 n y C6 H6 QUI sing 223 n n C7 C8 QUI doub 224 n y C7 H7 QUI sing 225 n n C8 C9 QUI sing 226 n y C8 H8 QUI sing 227 n n C9 C10 QUI doub 228 n y C O1 QUI doub 229 n n C O2 QUI sing 230 n n O2 HO2 QUI sing 231 n n # _atom_sites.entry_id 2DA8 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 QUI A 1 0 0 QUI QUI . E 3 QUI A 1 9 9 QUI QUI . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 QUI . . . D 3 -4.822 -0.041 1.987 1 0 ? N1 QUI 0 A 1 HETATM 2 C C2 QUI . . . D 3 -5.3 1.169 1.646 1 0 ? C2 QUI 0 A 1 HETATM 3 C C3 QUI . . . D 3 -5.208 2.245 2.54 1 0 ? C3 QUI 0 A 1 HETATM 4 N N4 QUI . . . D 3 -4.645 2.093 3.752 1 0 ? N4 QUI 0 A 1 HETATM 5 C C5 QUI . . . D 3 -3.594 0.714 5.338 1 0 ? C5 QUI 0 A 1 HETATM 6 C C6 QUI . . . D 3 -3.102 -0.535 5.704 1 0 ? C6 QUI 0 A 1 HETATM 7 C C7 QUI . . . D 3 -3.182 -1.63 4.826 1 0 ? C7 QUI 0 A 1 HETATM 8 C C8 QUI . . . D 3 -3.768 -1.448 3.563 1 0 ? C8 QUI 0 A 1 HETATM 9 C C9 QUI . . . D 3 -4.262 -0.196 3.194 1 0 ? C9 QUI 0 A 1 HETATM 10 C C10 QUI . . . D 3 -4.172 0.875 4.082 1 0 ? C10 QUI 0 A 1 HETATM 11 C C QUI . . . D 3 -5.919 1.292 0.31 1 0 ? C QUI 0 A 1 HETATM 12 O O1 QUI . . . D 3 -6.648 2.257 0.03 1 0 ? O1 QUI 0 A 1 HETATM 13 H H3 QUI . . . D 3 -5.588 3.207 2.263 1 0 ? H3 QUI 0 A 1 HETATM 14 H H5 QUI . . . D 3 -3.525 1.539 6.016 1 0 ? H5 QUI 0 A 1 HETATM 15 H H6 QUI . . . D 3 -2.658 -0.657 6.665 1 0 ? H6 QUI 0 A 1 HETATM 16 H H7 QUI . . . D 3 -2.795 -2.585 5.111 1 0 ? H7 QUI 0 A 1 HETATM 17 H H8 QUI . . . D 3 -3.629 -2.198 2.811 1 0 ? H8 QUI 0 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 4 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 1749 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #