data_2DBR # _model_server_result.job_id yTsQln-WtojJWGrSZjo8bw _model_server_result.datetime_utc '2024-11-22 20:28:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dbr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":503}' # _entry.id 2DBR # _exptl.entry_id 2DBR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 113.76 _cell.angle_beta 91.17 _cell.angle_gamma 94 _cell.entry_id 2DBR _cell.length_a 68.052 _cell.length_b 85.443 _cell.length_c 107.132 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DBR _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,G,H,I,J,K,L,Y,Z 1 1 C,D,M,N,O,P,Q,R,AA,BA 2 1 E,F,S,T,U,V,W,X,CA,DA 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 J N N ? 2 K N N ? 2 M N N ? 2 N N N ? 2 P N N ? 2 Q N N ? 2 S N N ? 2 T N N ? 2 V N N ? 2 W N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 357 n n S O2 SO4 doub 358 n n S O3 SO4 sing 359 n n S O4 SO4 sing 360 n n # _atom_sites.entry_id 2DBR _atom_sites.fract_transf_matrix[1][1] 0.014695 _atom_sites.fract_transf_matrix[1][2] 0.001028 _atom_sites.fract_transf_matrix[1][3] 0.000784 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011732 _atom_sites.fract_transf_matrix[2][3] 0.005203 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010213 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 SO4 A 1 501 501 SO4 SO4 . H 2 SO4 A 1 507 507 SO4 SO4 . I 3 NAP A 1 401 401 NAP NAP . J 2 SO4 B 1 503 503 SO4 SO4 . K 2 SO4 B 1 509 509 SO4 SO4 . L 3 NAP B 1 402 402 NAP NAP . M 2 SO4 C 1 502 502 SO4 SO4 . N 2 SO4 C 1 508 508 SO4 SO4 . O 3 NAP C 1 403 403 NAP NAP . P 2 SO4 D 1 504 504 SO4 SO4 . Q 2 SO4 D 1 510 510 SO4 SO4 . R 3 NAP D 1 404 404 NAP NAP . S 2 SO4 E 1 505 505 SO4 SO4 . T 2 SO4 E 1 511 511 SO4 SO4 . U 3 NAP E 1 405 405 NAP NAP . V 2 SO4 F 1 506 506 SO4 SO4 . W 2 SO4 F 1 512 512 SO4 SO4 . X 3 NAP F 1 406 406 NAP NAP . Y 4 HOH A 1 508 1 HOH HOH . Y 4 HOH A 2 509 4 HOH HOH . Y 4 HOH A 3 510 13 HOH HOH . Y 4 HOH A 4 511 21 HOH HOH . Y 4 HOH A 5 512 22 HOH HOH . Y 4 HOH A 6 513 24 HOH HOH . Y 4 HOH A 7 514 31 HOH HOH . Y 4 HOH A 8 515 37 HOH HOH . Y 4 HOH A 9 516 57 HOH HOH . Y 4 HOH A 10 517 65 HOH HOH . Y 4 HOH A 11 518 67 HOH HOH . Z 4 HOH B 1 510 9 HOH HOH . Z 4 HOH B 2 511 11 HOH HOH . Z 4 HOH B 3 512 14 HOH HOH . Z 4 HOH B 4 513 16 HOH HOH . Z 4 HOH B 5 514 17 HOH HOH . Z 4 HOH B 6 515 18 HOH HOH . Z 4 HOH B 7 516 28 HOH HOH . Z 4 HOH B 8 517 30 HOH HOH . Z 4 HOH B 9 518 32 HOH HOH . Z 4 HOH B 10 519 34 HOH HOH . Z 4 HOH B 11 520 40 HOH HOH . Z 4 HOH B 12 521 41 HOH HOH . Z 4 HOH B 13 522 43 HOH HOH . Z 4 HOH B 14 523 45 HOH HOH . Z 4 HOH B 15 524 46 HOH HOH . Z 4 HOH B 16 525 49 HOH HOH . Z 4 HOH B 17 526 52 HOH HOH . Z 4 HOH B 18 527 54 HOH HOH . Z 4 HOH B 19 528 55 HOH HOH . Z 4 HOH B 20 529 56 HOH HOH . Z 4 HOH B 21 530 59 HOH HOH . Z 4 HOH B 22 531 76 HOH HOH . AA 4 HOH C 1 509 6 HOH HOH . AA 4 HOH C 2 510 7 HOH HOH . AA 4 HOH C 3 511 19 HOH HOH . AA 4 HOH C 4 512 20 HOH HOH . AA 4 HOH C 5 513 25 HOH HOH . AA 4 HOH C 6 514 26 HOH HOH . AA 4 HOH C 7 515 27 HOH HOH . AA 4 HOH C 8 516 33 HOH HOH . AA 4 HOH C 9 517 35 HOH HOH . AA 4 HOH C 10 518 42 HOH HOH . AA 4 HOH C 11 519 50 HOH HOH . AA 4 HOH C 12 520 51 HOH HOH . AA 4 HOH C 13 521 53 HOH HOH . AA 4 HOH C 14 522 70 HOH HOH . AA 4 HOH C 15 523 75 HOH HOH . AA 4 HOH C 16 524 78 HOH HOH . AA 4 HOH C 17 525 79 HOH HOH . AA 4 HOH C 18 526 80 HOH HOH . BA 4 HOH D 1 511 3 HOH HOH . BA 4 HOH D 2 512 5 HOH HOH . BA 4 HOH D 3 513 12 HOH HOH . BA 4 HOH D 4 514 23 HOH HOH . BA 4 HOH D 5 515 29 HOH HOH . BA 4 HOH D 6 516 44 HOH HOH . BA 4 HOH D 7 517 60 HOH HOH . BA 4 HOH D 8 518 61 HOH HOH . BA 4 HOH D 9 519 62 HOH HOH . BA 4 HOH D 10 520 63 HOH HOH . BA 4 HOH D 11 521 64 HOH HOH . BA 4 HOH D 12 522 68 HOH HOH . BA 4 HOH D 13 523 69 HOH HOH . BA 4 HOH D 14 524 74 HOH HOH . BA 4 HOH D 15 525 77 HOH HOH . BA 4 HOH D 16 526 81 HOH HOH . BA 4 HOH D 17 527 82 HOH HOH . CA 4 HOH E 1 512 8 HOH HOH . CA 4 HOH E 2 513 36 HOH HOH . CA 4 HOH E 3 514 38 HOH HOH . CA 4 HOH E 4 515 47 HOH HOH . CA 4 HOH E 5 516 48 HOH HOH . CA 4 HOH E 6 517 72 HOH HOH . DA 4 HOH F 1 513 2 HOH HOH . DA 4 HOH F 2 514 10 HOH HOH . DA 4 HOH F 3 515 15 HOH HOH . DA 4 HOH F 4 516 39 HOH HOH . DA 4 HOH F 5 517 58 HOH HOH . DA 4 HOH F 6 518 66 HOH HOH . DA 4 HOH F 7 519 71 HOH HOH . DA 4 HOH F 8 520 73 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 2 28.359 34.188 11.977 1 56.96 ? S SO4 503 B 1 HETATM 2 O O1 SO4 . . . J 2 29.516 34.557 12.859 1 53.43 ? O1 SO4 503 B 1 HETATM 3 O O2 SO4 . . . J 2 28.021 35.338 11.077 1 45.95 ? O2 SO4 503 B 1 HETATM 4 O O3 SO4 . . . J 2 28.725 32.991 11.151 1 59.1 ? O3 SO4 503 B 1 HETATM 5 O O4 SO4 . . . J 2 27.167 33.857 12.827 1 56.19 ? O4 SO4 503 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #