data_2DCA # _model_server_result.job_id X3w8oWH8BQF7d1tKZnkzXw _model_server_result.datetime_utc '2024-12-21 14:51:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dca # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":750}' # _entry.id 2DCA # _exptl.entry_id 2DCA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 344.36 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{[(2S,3S)-3-(ETHOXYCARBONYL)OXIRAN-2-YL]CARBONYL}-L-ISOLEUCYL-L-ALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2DCA _cell.length_a 72.19 _cell.length_b 72.19 _cell.length_c 139.71 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DCA _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 14 A CYS 14 1_555 A SG CYS 43 A CYS 43 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 26 A CYS 26 1_555 A SG CYS 71 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 A SG CYS 62 A CYS 62 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf4 A SG CYS 63 A CYS 63 1_555 A SG CYS 67 A CYS 67 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf5 A SG CYS 100 A CYS 100 1_555 A SG CYS 132 A CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf6 A SG CYS 108 A CYS 108 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 A SG CYS 148 A CYS 148 1_555 A SG CYS 252 A CYS 252 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale1 A SG CYS 29 A CYS 29 1_555 C C3 75V . A 75V 750 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.808 ? # _chem_comp.formula 'C15 H24 N2 O7' _chem_comp.formula_weight 344.36 _chem_comp.id 75V _chem_comp.mon_nstd_flag . _chem_comp.name N-{[(2S,3S)-3-(ETHOXYCARBONYL)OXIRAN-2-YL]CARBONYL}-L-ISOLEUCYL-L-ALANINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms CA075;N-(L-3-TRANS-ETHOXYCARBONYLOXIRANE-2-CARBONYL)-L-ISOLEUCYL-L-ALANINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 O2 75V doub 1 n n C9 O3 75V sing 2 n n C9 C2 75V sing 3 n n O3 C10 75V sing 4 n n C10 C11 75V sing 5 n n C10 H101 75V sing 6 n n C10 H102 75V sing 7 n n C11 H111 75V sing 8 n n C11 H112 75V sing 9 n n C11 H113 75V sing 10 n n C4 C3 75V sing 11 n n C4 O4 75V doub 12 n n C4 N1 75V sing 13 n n C3 C2 75V sing 14 n n C3 O1 75V sing 15 n n C3 H3 75V sing 16 n n C2 O1 75V sing 17 n n C2 H2 75V sing 18 n n N1 C5 75V sing 19 n n N1 HN1 75V sing 20 n n C5 C6 75V sing 21 n n C5 C12 75V sing 22 n n C5 H5 75V sing 23 n n C6 O5 75V doub 24 n n C6 N2 75V sing 25 n n C12 C14 75V sing 26 n n C12 C13 75V sing 27 n n C12 H12 75V sing 28 n n C14 C15 75V sing 29 n n C14 H141 75V sing 30 n n C14 H142 75V sing 31 n n C13 H131 75V sing 32 n n C13 H132 75V sing 33 n n C13 H133 75V sing 34 n n C15 H151 75V sing 35 n n C15 H152 75V sing 36 n n C15 H153 75V sing 37 n n N2 C7 75V sing 38 n n N2 HN2 75V sing 39 n n C7 C8 75V sing 40 n n C7 C16 75V sing 41 n n C7 H7 75V sing 42 n n C8 O6 75V sing 43 n n C8 O7 75V doub 44 n n O6 HO6 75V sing 45 n n C16 H161 75V sing 46 n n C16 H162 75V sing 47 n n C16 H163 75V sing 48 n n # _atom_sites.entry_id 2DCA _atom_sites.fract_transf_matrix[1][1] 0.013852 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013852 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007158 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 801 801 PO4 PO4 . C 3 75V A 1 750 750 75V 75V . D 4 GOL A 1 500 500 GOL GOL . E 5 HOH A 1 802 1 HOH WAT . E 5 HOH A 2 803 2 HOH WAT . E 5 HOH A 3 804 3 HOH WAT . E 5 HOH A 4 805 4 HOH WAT . E 5 HOH A 5 806 5 HOH WAT . E 5 HOH A 6 807 6 HOH WAT . E 5 HOH A 7 808 7 HOH WAT . E 5 HOH A 8 809 8 HOH WAT . E 5 HOH A 9 810 9 HOH WAT . E 5 HOH A 10 811 10 HOH WAT . E 5 HOH A 11 812 11 HOH WAT . E 5 HOH A 12 813 12 HOH WAT . E 5 HOH A 13 814 13 HOH WAT . E 5 HOH A 14 815 14 HOH WAT . E 5 HOH A 15 816 15 HOH WAT . E 5 HOH A 16 817 17 HOH WAT . E 5 HOH A 17 818 18 HOH WAT . E 5 HOH A 18 819 19 HOH WAT . E 5 HOH A 19 820 20 HOH WAT . E 5 HOH A 20 821 21 HOH WAT . E 5 HOH A 21 822 22 HOH WAT . E 5 HOH A 22 823 23 HOH WAT . E 5 HOH A 23 824 24 HOH WAT . E 5 HOH A 24 825 25 HOH WAT . E 5 HOH A 25 826 26 HOH WAT . E 5 HOH A 26 827 28 HOH WAT . E 5 HOH A 27 828 29 HOH WAT . E 5 HOH A 28 829 31 HOH WAT . E 5 HOH A 29 830 33 HOH WAT . E 5 HOH A 30 831 34 HOH WAT . E 5 HOH A 31 832 35 HOH WAT . E 5 HOH A 32 833 36 HOH WAT . E 5 HOH A 33 834 37 HOH WAT . E 5 HOH A 34 835 39 HOH WAT . E 5 HOH A 35 836 40 HOH WAT . E 5 HOH A 36 837 41 HOH WAT . E 5 HOH A 37 838 42 HOH WAT . E 5 HOH A 38 839 43 HOH WAT . E 5 HOH A 39 840 44 HOH WAT . E 5 HOH A 40 841 45 HOH WAT . E 5 HOH A 41 842 46 HOH WAT . E 5 HOH A 42 843 47 HOH WAT . E 5 HOH A 43 844 48 HOH WAT . E 5 HOH A 44 845 49 HOH WAT . E 5 HOH A 45 846 50 HOH WAT . E 5 HOH A 46 847 51 HOH WAT . E 5 HOH A 47 848 52 HOH WAT . E 5 HOH A 48 849 53 HOH WAT . E 5 HOH A 49 850 54 HOH WAT . E 5 HOH A 50 851 56 HOH WAT . E 5 HOH A 51 852 57 HOH WAT . E 5 HOH A 52 853 58 HOH WAT . E 5 HOH A 53 854 62 HOH WAT . E 5 HOH A 54 855 63 HOH WAT . E 5 HOH A 55 856 65 HOH WAT . E 5 HOH A 56 857 66 HOH WAT . E 5 HOH A 57 858 67 HOH WAT . E 5 HOH A 58 859 68 HOH WAT . E 5 HOH A 59 860 71 HOH WAT . E 5 HOH A 60 861 72 HOH WAT . E 5 HOH A 61 862 73 HOH WAT . E 5 HOH A 62 863 74 HOH WAT . E 5 HOH A 63 864 75 HOH WAT . E 5 HOH A 64 865 76 HOH WAT . E 5 HOH A 65 866 77 HOH WAT . E 5 HOH A 66 867 78 HOH WAT . E 5 HOH A 67 868 79 HOH WAT . E 5 HOH A 68 869 81 HOH WAT . E 5 HOH A 69 870 82 HOH WAT . E 5 HOH A 70 871 83 HOH WAT . E 5 HOH A 71 872 84 HOH WAT . E 5 HOH A 72 873 85 HOH WAT . E 5 HOH A 73 874 86 HOH WAT . E 5 HOH A 74 875 88 HOH WAT . E 5 HOH A 75 876 89 HOH WAT . E 5 HOH A 76 877 90 HOH WAT . E 5 HOH A 77 878 91 HOH WAT . E 5 HOH A 78 879 92 HOH WAT . E 5 HOH A 79 880 93 HOH WAT . E 5 HOH A 80 881 94 HOH WAT . E 5 HOH A 81 882 96 HOH WAT . E 5 HOH A 82 883 97 HOH WAT . E 5 HOH A 83 884 98 HOH WAT . E 5 HOH A 84 885 99 HOH WAT . E 5 HOH A 85 886 100 HOH WAT . E 5 HOH A 86 887 101 HOH WAT . E 5 HOH A 87 888 102 HOH WAT . E 5 HOH A 88 889 103 HOH WAT . E 5 HOH A 89 890 104 HOH WAT . E 5 HOH A 90 891 105 HOH WAT . E 5 HOH A 91 892 106 HOH WAT . E 5 HOH A 92 893 107 HOH WAT . E 5 HOH A 93 894 109 HOH WAT . E 5 HOH A 94 895 110 HOH WAT . E 5 HOH A 95 896 111 HOH WAT . E 5 HOH A 96 897 112 HOH WAT . E 5 HOH A 97 898 113 HOH WAT . E 5 HOH A 98 899 114 HOH WAT . E 5 HOH A 99 900 115 HOH WAT . E 5 HOH A 100 901 116 HOH WAT . E 5 HOH A 101 902 117 HOH WAT . E 5 HOH A 102 903 118 HOH WAT . E 5 HOH A 103 904 119 HOH WAT . E 5 HOH A 104 905 121 HOH WAT . E 5 HOH A 105 906 122 HOH WAT . E 5 HOH A 106 907 123 HOH WAT . E 5 HOH A 107 908 125 HOH WAT . E 5 HOH A 108 909 126 HOH WAT . E 5 HOH A 109 910 127 HOH WAT . E 5 HOH A 110 911 128 HOH WAT . E 5 HOH A 111 912 130 HOH WAT . E 5 HOH A 112 913 131 HOH WAT . E 5 HOH A 113 914 132 HOH WAT . E 5 HOH A 114 915 133 HOH WAT . E 5 HOH A 115 916 134 HOH WAT . E 5 HOH A 116 917 135 HOH WAT . E 5 HOH A 117 918 137 HOH WAT . E 5 HOH A 118 919 138 HOH WAT . E 5 HOH A 119 920 139 HOH WAT . E 5 HOH A 120 921 140 HOH WAT . E 5 HOH A 121 922 141 HOH WAT . E 5 HOH A 122 923 142 HOH WAT . E 5 HOH A 123 924 143 HOH WAT . E 5 HOH A 124 925 144 HOH WAT . E 5 HOH A 125 926 145 HOH WAT . E 5 HOH A 126 927 146 HOH WAT . E 5 HOH A 127 928 154 HOH WAT . E 5 HOH A 128 929 155 HOH WAT . E 5 HOH A 129 930 159 HOH WAT . E 5 HOH A 130 931 165 HOH WAT . E 5 HOH A 131 932 166 HOH WAT . E 5 HOH A 132 933 168 HOH WAT . E 5 HOH A 133 934 171 HOH WAT . E 5 HOH A 134 935 172 HOH WAT . E 5 HOH A 135 936 173 HOH WAT . E 5 HOH A 136 937 174 HOH WAT . E 5 HOH A 137 938 175 HOH WAT . E 5 HOH A 138 939 177 HOH WAT . E 5 HOH A 139 940 178 HOH WAT . E 5 HOH A 140 941 179 HOH WAT . E 5 HOH A 141 942 181 HOH WAT . E 5 HOH A 142 943 184 HOH WAT . E 5 HOH A 143 944 186 HOH WAT . E 5 HOH A 144 945 187 HOH WAT . E 5 HOH A 145 946 188 HOH WAT . E 5 HOH A 146 947 189 HOH WAT . E 5 HOH A 147 948 190 HOH WAT . E 5 HOH A 148 949 191 HOH WAT . E 5 HOH A 149 950 192 HOH WAT . E 5 HOH A 150 951 194 HOH WAT . E 5 HOH A 151 952 195 HOH WAT . E 5 HOH A 152 953 196 HOH WAT . E 5 HOH A 153 954 197 HOH WAT . E 5 HOH A 154 955 198 HOH WAT . E 5 HOH A 155 956 200 HOH WAT . E 5 HOH A 156 957 201 HOH WAT . E 5 HOH A 157 958 202 HOH WAT . E 5 HOH A 158 959 203 HOH WAT . E 5 HOH A 159 960 205 HOH WAT . E 5 HOH A 160 961 206 HOH WAT . E 5 HOH A 161 962 207 HOH WAT . E 5 HOH A 162 963 212 HOH WAT . E 5 HOH A 163 964 213 HOH WAT . E 5 HOH A 164 965 214 HOH WAT . E 5 HOH A 165 966 216 HOH WAT . E 5 HOH A 166 967 217 HOH WAT . E 5 HOH A 167 968 219 HOH WAT . E 5 HOH A 168 969 220 HOH WAT . E 5 HOH A 169 970 221 HOH WAT . E 5 HOH A 170 971 222 HOH WAT . E 5 HOH A 171 972 223 HOH WAT . E 5 HOH A 172 973 224 HOH WAT . E 5 HOH A 173 974 227 HOH WAT . E 5 HOH A 174 975 228 HOH WAT . E 5 HOH A 175 976 230 HOH WAT . E 5 HOH A 176 977 231 HOH WAT . E 5 HOH A 177 978 234 HOH WAT . E 5 HOH A 178 979 245 HOH WAT . E 5 HOH A 179 980 252 HOH WAT . E 5 HOH A 180 981 253 HOH WAT . E 5 HOH A 181 982 263 HOH WAT . E 5 HOH A 182 983 266 HOH WAT . E 5 HOH A 183 984 267 HOH WAT . E 5 HOH A 184 985 268 HOH WAT . E 5 HOH A 185 986 270 HOH WAT . E 5 HOH A 186 987 271 HOH WAT . E 5 HOH A 187 988 272 HOH WAT . E 5 HOH A 188 989 282 HOH WAT . E 5 HOH A 189 990 283 HOH WAT . E 5 HOH A 190 991 285 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 75V . . . C 3 14.134 18.615 -6.887 1 22.14 ? C9 75V 750 A 1 HETATM 2 O O2 75V . . . C 3 15.139 18.522 -7.629 1 19.82 ? O2 75V 750 A 1 HETATM 3 O O3 75V . . . C 3 14.147 18.886 -5.515 1 23.35 ? O3 75V 750 A 1 HETATM 4 C C10 75V . . . C 3 15.411 19.089 -4.821 1 23.54 ? C10 75V 750 A 1 HETATM 5 C C11 75V . . . C 3 15.591 20.569 -4.456 1 22.88 ? C11 75V 750 A 1 HETATM 6 C C4 75V . . . C 3 10.406 19.478 -7.866 1 25.92 ? C4 75V 750 A 1 HETATM 7 C C3 75V . . . C 3 11.806 19.668 -7.287 1 25.34 ? C3 75V 750 A 1 HETATM 8 C C2 75V . . . C 3 12.713 18.427 -7.451 1 24.84 ? C2 75V 750 A 1 HETATM 9 O O1 75V . . . C 3 12.055 17.322 -6.817 1 25.39 ? O1 75V 750 A 1 HETATM 10 O O4 75V . . . C 3 10.218 19.67 -9.069 1 22.03 ? O4 75V 750 A 1 HETATM 11 N N1 75V . . . C 3 9.45 19.048 -7.007 1 25.28 ? N1 75V 750 A 1 HETATM 12 C C5 75V . . . C 3 8.16 18.364 -7.434 1 26.54 ? C5 75V 750 A 1 HETATM 13 C C6 75V . . . C 3 7.302 19.341 -8.338 1 26.55 ? C6 75V 750 A 1 HETATM 14 O O5 75V . . . C 3 7.662 20.491 -8.589 1 27.6 ? O5 75V 750 A 1 HETATM 15 C C12 75V . . . C 3 7.372 17.967 -6.121 1 26.53 ? C12 75V 750 A 1 HETATM 16 C C14 75V . . . C 3 7.009 19.196 -5.208 1 27.03 ? C14 75V 750 A 1 HETATM 17 C C13 75V . . . C 3 8.198 16.983 -5.238 1 26.44 ? C13 75V 750 A 1 HETATM 18 C C15 75V . . . C 3 5.662 19.099 -4.471 1 28.16 ? C15 75V 750 A 1 HETATM 19 N N2 75V . . . C 3 6.155 18.836 -8.823 1 26.37 ? N2 75V 750 A 1 HETATM 20 C C7 75V . . . C 3 5.227 19.594 -9.689 1 25.64 ? C7 75V 750 A 1 HETATM 21 C C8 75V . . . C 3 3.929 19.962 -8.941 1 24.21 ? C8 75V 750 A 1 HETATM 22 O O6 75V . . . C 3 2.989 20.596 -9.42 1 23.5 ? O6 75V 750 A 1 HETATM 23 C C16 75V . . . C 3 4.975 18.713 -10.926 1 24.84 ? C16 75V 750 A 1 HETATM 24 O O7 75V . . . C 3 3.928 19.503 -7.665 1 23.21 ? O7 75V 750 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 24 #