data_2DCG # _model_server_result.job_id ZQ_LDOblgj_luE7D3QOm6A _model_server_result.datetime_utc '2024-11-16 14:43:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dcg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":13}' # _entry.id 2DCG # _exptl.entry_id 2DCG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2DCG _cell.length_a 17.87 _cell.length_b 31.55 _cell.length_c 44.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DCG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A N7 DG 6 A DG 6 1_555 C MG MG . A MG 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc2 C MG MG . A MG 13 1_555 F O HOH . A HOH 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.157 ? metalc ? metalc3 C MG MG . A MG 13 1_555 F O HOH . A HOH 17 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.111 ? metalc ? metalc4 C MG MG . A MG 13 1_555 F O HOH . A HOH 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc5 C MG MG . A MG 13 1_555 F O HOH . A HOH 19 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? metalc ? metalc6 C MG MG . A MG 13 1_555 F O HOH . A HOH 20 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? hydrog WATSON-CRICK hydrog1 A N3 DC 1 A DC 1 1_555 B N1 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N4 DC 1 A DC 1 1_555 B O6 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A O2 DC 1 A DC 1 1_555 B N2 DG 6 B DG 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A N1 DG 2 A DG 2 1_555 B N3 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N2 DG 2 A DG 2 1_555 B O2 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A O6 DG 2 A DG 2 1_555 B N4 DC 5 B DC 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A N3 DC 3 A DC 3 1_555 B N1 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N4 DC 3 A DC 3 1_555 B O6 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A O2 DC 3 A DC 3 1_555 B N2 DG 4 B DG 10 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DG 4 A DG 4 1_555 B N3 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N2 DG 4 A DG 4 1_555 B O2 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A O6 DG 4 A DG 4 1_555 B N4 DC 3 B DC 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N3 DC 5 A DC 5 1_555 B N1 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N4 DC 5 A DC 5 1_555 B O6 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A O2 DC 5 A DC 5 1_555 B N2 DG 2 B DG 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N1 DG 6 A DG 6 1_555 B N3 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N2 DG 6 A DG 6 1_555 B O2 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O6 DG 6 A DG 6 1_555 B N4 DC 1 B DC 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2DCG _atom_sites.fract_transf_matrix[1][1] 0.05596 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.031696 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022432 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 13 13 MG MG . D 3 SPM A 1 14 14 SPM SPM . E 3 SPM B 1 15 15 SPM SPM . F 4 HOH A 1 16 16 HOH HOH . F 4 HOH A 2 17 17 HOH HOH . F 4 HOH A 3 18 18 HOH HOH . F 4 HOH A 4 19 19 HOH HOH . F 4 HOH A 5 20 20 HOH HOH . F 4 HOH A 6 22 22 HOH HOH . F 4 HOH A 7 24 24 HOH HOH . F 4 HOH A 8 26 26 HOH HOH . F 4 HOH A 9 28 28 HOH HOH . F 4 HOH A 10 31 31 HOH HOH . F 4 HOH A 11 33 33 HOH HOH . F 4 HOH A 12 34 34 HOH HOH . F 4 HOH A 13 35 35 HOH HOH . F 4 HOH A 14 36 36 HOH HOH . F 4 HOH A 15 40 40 HOH HOH . F 4 HOH A 16 41 41 HOH HOH . F 4 HOH A 17 44 44 HOH HOH . F 4 HOH A 18 46 46 HOH HOH . F 4 HOH A 19 47 47 HOH HOH . F 4 HOH A 20 48 48 HOH HOH . F 4 HOH A 21 49 49 HOH HOH . F 4 HOH A 22 50 50 HOH HOH . F 4 HOH A 23 51 51 HOH HOH . F 4 HOH A 24 52 52 HOH HOH . F 4 HOH A 25 54 54 HOH HOH . F 4 HOH A 26 57 57 HOH HOH . F 4 HOH A 27 58 58 HOH HOH . F 4 HOH A 28 60 60 HOH HOH . F 4 HOH A 29 62 62 HOH HOH . F 4 HOH A 30 64 64 HOH HOH . F 4 HOH A 31 66 66 HOH HOH . F 4 HOH A 32 71 71 HOH HOH . F 4 HOH A 33 72 72 HOH HOH . F 4 HOH A 34 73 73 HOH HOH . F 4 HOH A 35 74 74 HOH HOH . F 4 HOH A 36 75 75 HOH HOH . F 4 HOH A 37 76 76 HOH HOH . F 4 HOH A 38 77 77 HOH HOH . F 4 HOH A 39 81 81 HOH HOH . F 4 HOH A 40 82 82 HOH HOH . F 4 HOH A 41 83 83 HOH HOH . F 4 HOH A 42 85 85 HOH HOH . F 4 HOH A 43 86 86 HOH HOH . F 4 HOH A 44 87 87 HOH HOH . F 4 HOH A 45 89 89 HOH HOH . G 4 HOH B 1 21 21 HOH HOH . G 4 HOH B 2 23 23 HOH HOH . G 4 HOH B 3 25 25 HOH HOH . G 4 HOH B 4 27 27 HOH HOH . G 4 HOH B 5 29 29 HOH HOH . G 4 HOH B 6 30 30 HOH HOH . G 4 HOH B 7 32 32 HOH HOH . G 4 HOH B 8 37 37 HOH HOH . G 4 HOH B 9 38 38 HOH HOH . G 4 HOH B 10 39 39 HOH HOH . G 4 HOH B 11 42 42 HOH HOH . G 4 HOH B 12 43 43 HOH HOH . G 4 HOH B 13 45 45 HOH HOH . G 4 HOH B 14 53 53 HOH HOH . G 4 HOH B 15 55 55 HOH HOH . G 4 HOH B 16 56 56 HOH HOH . G 4 HOH B 17 59 59 HOH HOH . G 4 HOH B 18 61 61 HOH HOH . G 4 HOH B 19 63 63 HOH HOH . G 4 HOH B 20 65 65 HOH HOH . G 4 HOH B 21 67 67 HOH HOH . G 4 HOH B 22 68 68 HOH HOH . G 4 HOH B 23 69 69 HOH HOH . G 4 HOH B 24 70 70 HOH HOH . G 4 HOH B 25 78 78 HOH HOH . G 4 HOH B 26 79 79 HOH HOH . G 4 HOH B 27 80 80 HOH HOH . G 4 HOH B 28 84 84 HOH HOH . G 4 HOH B 29 88 88 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 14.538 _atom_site.Cartn_y 7.131 _atom_site.Cartn_z 38.333 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 8.51 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 13 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #