data_2DDQ
#
_model_server_result.job_id            QMW6J1oClhIyyiZHzddOGw 
_model_server_result.datetime_utc      '2024-11-28 22:57:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ddq 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    2DDQ 
#
_exptl.entry_id    2DDQ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              238.305 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          118.77 
_cell.angle_gamma         90 
_cell.entry_id            2DDQ 
_cell.length_a            127.318 
_cell.length_b            65.794 
_cell.length_c            64.31 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2DDQ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 140 H CYS 140 1_555 A SG CYS 195 H CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 93 L CYS 93 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? 
disulf ? disulf4 B SG CYS 139 L CYS 139 1_555 B SG CYS 199 L CYS 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
#
_chem_comp.formula           'C8 H18 N2 O4 S' 
_chem_comp.formula_weight    238.305 
_chem_comp.id                EPE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEPES 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 EPE sing 83 n n 
N1 C6 EPE sing 84 n n 
N1 C9 EPE sing 85 n n 
C2 C3 EPE sing 86 n n 
C2 H21 EPE sing 87 n n 
C2 H22 EPE sing 88 n n 
C3 N4 EPE sing 89 n n 
C3 H31 EPE sing 90 n n 
C3 H32 EPE sing 91 n n 
N4 C5 EPE sing 92 n n 
N4 C7 EPE sing 93 n n 
C5 C6 EPE sing 94 n n 
C5 H51 EPE sing 95 n n 
C5 H52 EPE sing 96 n n 
C6 H61 EPE sing 97 n n 
C6 H62 EPE sing 98 n n 
C7 C8 EPE sing 99 n n 
C7 H71 EPE sing 100 n n 
C7 H72 EPE sing 101 n n 
C8 O8 EPE sing 102 n n 
C8 H81 EPE sing 103 n n 
C8 H82 EPE sing 104 n n 
O8 HO8 EPE sing 105 n n 
C9 C10 EPE sing 106 n n 
C9 H91 EPE sing 107 n n 
C9 H92 EPE sing 108 n n 
C10 S EPE sing 109 n n 
C10 H101 EPE sing 110 n n 
C10 H102 EPE sing 111 n n 
S O1S EPE doub 112 n n 
S O2S EPE doub 113 n n 
S O3S EPE sing 114 n n 
O3S HOS3 EPE sing 115 n n 
#
_atom_sites.entry_id                     2DDQ 
_atom_sites.fract_transf_matrix[1][1]    0.007854 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004313 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015199 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017739 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 EPE H 1 501 501 EPE EPE . 
D 4 HRB L 1 502 502 HRB HRB . 
E 5 HOH H 1 502 2 HOH WAT . 
E 5 HOH H 2 503 3 HOH WAT . 
E 5 HOH H 3 504 4 HOH WAT . 
E 5 HOH H 4 505 5 HOH WAT . 
E 5 HOH H 5 506 6 HOH WAT . 
E 5 HOH H 6 507 8 HOH WAT . 
E 5 HOH H 7 508 9 HOH WAT . 
E 5 HOH H 8 509 10 HOH WAT . 
E 5 HOH H 9 510 11 HOH WAT . 
E 5 HOH H 10 511 12 HOH WAT . 
E 5 HOH H 11 512 13 HOH WAT . 
E 5 HOH H 12 513 15 HOH WAT . 
E 5 HOH H 13 514 16 HOH WAT . 
E 5 HOH H 14 515 17 HOH WAT . 
E 5 HOH H 15 516 19 HOH WAT . 
E 5 HOH H 16 517 23 HOH WAT . 
E 5 HOH H 17 518 24 HOH WAT . 
E 5 HOH H 18 519 29 HOH WAT . 
E 5 HOH H 19 520 33 HOH WAT . 
E 5 HOH H 20 521 37 HOH WAT . 
E 5 HOH H 21 522 38 HOH WAT . 
E 5 HOH H 22 523 40 HOH WAT . 
E 5 HOH H 23 524 41 HOH WAT . 
E 5 HOH H 24 525 45 HOH WAT . 
E 5 HOH H 25 526 48 HOH WAT . 
E 5 HOH H 26 527 51 HOH WAT . 
E 5 HOH H 27 528 53 HOH WAT . 
E 5 HOH H 28 529 54 HOH WAT . 
E 5 HOH H 29 530 55 HOH WAT . 
E 5 HOH H 30 531 58 HOH WAT . 
E 5 HOH H 31 532 59 HOH WAT . 
E 5 HOH H 32 533 60 HOH WAT . 
E 5 HOH H 33 534 67 HOH WAT . 
E 5 HOH H 34 535 69 HOH WAT . 
E 5 HOH H 35 536 71 HOH WAT . 
E 5 HOH H 36 537 72 HOH WAT . 
E 5 HOH H 37 538 73 HOH WAT . 
E 5 HOH H 38 539 75 HOH WAT . 
E 5 HOH H 39 540 79 HOH WAT . 
E 5 HOH H 40 541 80 HOH WAT . 
E 5 HOH H 41 542 81 HOH WAT . 
E 5 HOH H 42 543 83 HOH WAT . 
E 5 HOH H 43 544 87 HOH WAT . 
E 5 HOH H 44 545 89 HOH WAT . 
E 5 HOH H 45 546 91 HOH WAT . 
E 5 HOH H 46 547 92 HOH WAT . 
E 5 HOH H 47 548 93 HOH WAT . 
E 5 HOH H 48 549 96 HOH WAT . 
E 5 HOH H 49 550 97 HOH WAT . 
E 5 HOH H 50 551 100 HOH WAT . 
E 5 HOH H 51 552 101 HOH WAT . 
E 5 HOH H 52 553 103 HOH WAT . 
E 5 HOH H 53 554 104 HOH WAT . 
E 5 HOH H 54 555 107 HOH WAT . 
E 5 HOH H 55 556 108 HOH WAT . 
E 5 HOH H 56 557 109 HOH WAT . 
E 5 HOH H 57 558 110 HOH WAT . 
E 5 HOH H 58 559 116 HOH WAT . 
E 5 HOH H 59 560 123 HOH WAT . 
E 5 HOH H 60 561 124 HOH WAT . 
E 5 HOH H 61 562 125 HOH WAT . 
E 5 HOH H 62 563 127 HOH WAT . 
E 5 HOH H 63 564 130 HOH WAT . 
E 5 HOH H 64 565 131 HOH WAT . 
E 5 HOH H 65 566 132 HOH WAT . 
E 5 HOH H 66 567 133 HOH WAT . 
E 5 HOH H 67 568 136 HOH WAT . 
E 5 HOH H 68 569 138 HOH WAT . 
E 5 HOH H 69 570 139 HOH WAT . 
E 5 HOH H 70 571 140 HOH WAT . 
E 5 HOH H 71 572 141 HOH WAT . 
E 5 HOH H 72 573 145 HOH WAT . 
E 5 HOH H 73 574 149 HOH WAT . 
F 5 HOH L 1 503 1 HOH WAT . 
F 5 HOH L 2 504 7 HOH WAT . 
F 5 HOH L 3 505 14 HOH WAT . 
F 5 HOH L 4 506 18 HOH WAT . 
F 5 HOH L 5 507 20 HOH WAT . 
F 5 HOH L 6 508 21 HOH WAT . 
F 5 HOH L 7 509 22 HOH WAT . 
F 5 HOH L 8 510 25 HOH WAT . 
F 5 HOH L 9 511 26 HOH WAT . 
F 5 HOH L 10 512 27 HOH WAT . 
F 5 HOH L 11 513 28 HOH WAT . 
F 5 HOH L 12 514 30 HOH WAT . 
F 5 HOH L 13 515 31 HOH WAT . 
F 5 HOH L 14 516 32 HOH WAT . 
F 5 HOH L 15 517 34 HOH WAT . 
F 5 HOH L 16 518 35 HOH WAT . 
F 5 HOH L 17 519 36 HOH WAT . 
F 5 HOH L 18 520 39 HOH WAT . 
F 5 HOH L 19 521 42 HOH WAT . 
F 5 HOH L 20 522 43 HOH WAT . 
F 5 HOH L 21 523 44 HOH WAT . 
F 5 HOH L 22 524 46 HOH WAT . 
F 5 HOH L 23 525 47 HOH WAT . 
F 5 HOH L 24 526 49 HOH WAT . 
F 5 HOH L 25 527 50 HOH WAT . 
F 5 HOH L 26 528 52 HOH WAT . 
F 5 HOH L 27 529 56 HOH WAT . 
F 5 HOH L 28 530 57 HOH WAT . 
F 5 HOH L 29 531 61 HOH WAT . 
F 5 HOH L 30 532 62 HOH WAT . 
F 5 HOH L 31 533 63 HOH WAT . 
F 5 HOH L 32 534 64 HOH WAT . 
F 5 HOH L 33 535 65 HOH WAT . 
F 5 HOH L 34 536 66 HOH WAT . 
F 5 HOH L 35 537 68 HOH WAT . 
F 5 HOH L 36 538 70 HOH WAT . 
F 5 HOH L 37 539 74 HOH WAT . 
F 5 HOH L 38 540 76 HOH WAT . 
F 5 HOH L 39 541 77 HOH WAT . 
F 5 HOH L 40 542 78 HOH WAT . 
F 5 HOH L 41 543 82 HOH WAT . 
F 5 HOH L 42 544 84 HOH WAT . 
F 5 HOH L 43 545 85 HOH WAT . 
F 5 HOH L 44 546 86 HOH WAT . 
F 5 HOH L 45 547 88 HOH WAT . 
F 5 HOH L 46 548 90 HOH WAT . 
F 5 HOH L 47 549 94 HOH WAT . 
F 5 HOH L 48 550 95 HOH WAT . 
F 5 HOH L 49 551 98 HOH WAT . 
F 5 HOH L 50 552 99 HOH WAT . 
F 5 HOH L 51 553 102 HOH WAT . 
F 5 HOH L 52 554 105 HOH WAT . 
F 5 HOH L 53 555 106 HOH WAT . 
F 5 HOH L 54 556 111 HOH WAT . 
F 5 HOH L 55 557 112 HOH WAT . 
F 5 HOH L 56 558 113 HOH WAT . 
F 5 HOH L 57 559 114 HOH WAT . 
F 5 HOH L 58 560 115 HOH WAT . 
F 5 HOH L 59 561 117 HOH WAT . 
F 5 HOH L 60 562 118 HOH WAT . 
F 5 HOH L 61 563 119 HOH WAT . 
F 5 HOH L 62 564 120 HOH WAT . 
F 5 HOH L 63 565 121 HOH WAT . 
F 5 HOH L 64 566 122 HOH WAT . 
F 5 HOH L 65 567 126 HOH WAT . 
F 5 HOH L 66 568 128 HOH WAT . 
F 5 HOH L 67 569 129 HOH WAT . 
F 5 HOH L 68 570 134 HOH WAT . 
F 5 HOH L 69 571 135 HOH WAT . 
F 5 HOH L 70 572 137 HOH WAT . 
F 5 HOH L 71 573 142 HOH WAT . 
F 5 HOH L 72 574 143 HOH WAT . 
F 5 HOH L 73 575 144 HOH WAT . 
F 5 HOH L 74 576 146 HOH WAT . 
F 5 HOH L 75 577 147 HOH WAT . 
F 5 HOH L 76 578 148 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 EPE . . . C 3 41.156 -4.459 28.301 1 84.22 ? N1 EPE 501 H 1 
HETATM 2 C C2 EPE . . . C 3 40.016 -3.956 27.545 1 80.43 ? C2 EPE 501 H 1 
HETATM 3 C C3 EPE . . . C 3 39.065 -3.057 28.448 1 79.68 ? C3 EPE 501 H 1 
HETATM 4 N N4 EPE . . . C 3 39.893 -1.862 28.876 1 79.75 ? N4 EPE 501 H 1 
HETATM 5 C C5 EPE . . . C 3 41.229 -2.293 29.606 1 74.89 ? C5 EPE 501 H 1 
HETATM 6 C C6 EPE . . . C 3 41.998 -3.21 28.645 1 77.66 ? C6 EPE 501 H 1 
HETATM 7 C C7 EPE . . . C 3 38.993 -0.998 29.732 1 82.41 ? C7 EPE 501 H 1 
HETATM 8 C C8 EPE . . . C 3 39.592 0.294 30.259 1 84.39 ? C8 EPE 501 H 1 
HETATM 9 O O8 EPE . . . C 3 38.767 1.295 29.708 1 86.66 ? O8 EPE 501 H 1 
HETATM 10 C C9 EPE . . . C 3 41.955 -5.293 27.335 1 86.68 ? C9 EPE 501 H 1 
HETATM 11 C C10 EPE . . . C 3 43.099 -6.025 27.97 1 89.36 ? C10 EPE 501 H 1 
HETATM 12 S S EPE . . . C 3 43.986 -6.933 26.652 1 87.63 ? S EPE 501 H 1 
HETATM 13 O O1S EPE . . . C 3 43.095 -7.787 25.91 1 88.36 ? O1S EPE 501 H 1 
HETATM 14 O O2S EPE . . . C 3 44.819 -5.97 25.923 1 90.27 ? O2S EPE 501 H 1 
HETATM 15 O O3S EPE . . . C 3 45.095 -7.812 27.321 1 87.82 ? O3S EPE 501 H 1 
#
_model_server_stats.io_time_ms              57 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#