data_2DDU # _model_server_result.job_id sHATXdnqSh-QGpCZD-TV0A _model_server_result.datetime_utc '2025-03-06 09:35:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ddu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":2}' # _entry.id 2DDU # _exptl.entry_id 2DDU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 35.453 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CHLORIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2DDU _cell.length_a 129.932 _cell.length_b 129.932 _cell.length_c 122.485 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DDU _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PQS monomeric 1 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 -x+2/3,-x+y+1/3,-z+1/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 64.966 37.508138 40.828333 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 120 A CYS 1339 1_555 A SG CYS 129 A CYS 1348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 194 A CYS 1413 1_555 A SG CYS 204 A CYS 1423 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf3 A SG CYS 198 A CYS 1417 1_555 A SG CYS 209 A CYS 1428 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf4 A SG CYS 211 A CYS 1430 1_555 A SG CYS 222 A CYS 1441 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? disulf ? disulf5 A SG CYS 256 A CYS 1475 1_555 A SG CYS 303 A CYS 1522 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc1 B CA CA . A CA 1 1_555 E O HOH . A HOH 97 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc2 B CA CA . A CA 1 1_555 A O ARG 235 A ARG 1454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc3 B CA CA . A CA 1 1_555 A OE2 GLU 237 A GLU 1456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc4 B CA CA . A CA 1 1_555 A O ASP 261 A ASP 1480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.322 ? metalc ? metalc5 B CA CA . A CA 1 1_555 A O ARG 263 A ARG 1482 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc6 B CA CA . A CA 1 1_555 A OD1 ASP 374 A ASP 1593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc7 B CA CA . A CA 1 1_555 A OD2 ASP 374 A ASP 1593 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.081 ? metalc ? metalc8 D MG MG . A MG 3 1_555 E O HOH . A HOH 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc9 D MG MG . A MG 3 1_555 E O HOH . A HOH 101 12_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc10 D MG MG . A MG 3 1_555 E O HOH . A HOH 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc11 D MG MG . A MG 3 1_555 E O HOH . A HOH 102 12_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.955 ? metalc ? metalc12 D MG MG . A MG 3 1_555 E O HOH . A HOH 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc13 D MG MG . A MG 3 1_555 E O HOH . A HOH 103 12_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? # _chem_comp.formula 'Cl -1' _chem_comp.formula_weight 35.453 _chem_comp.id CL _chem_comp.mon_nstd_flag . _chem_comp.name 'CHLORIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2DDU _atom_sites.fract_transf_matrix[1][1] 0.007696 _atom_sites.fract_transf_matrix[1][2] 0.004443 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008887 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008164 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1 1 CA CA . C 3 CL A 1 2 2 CL CL . D 4 MG A 1 3 3 MG MO6 . E 5 HOH A 1 4 4 HOH HOH . E 5 HOH A 2 5 5 HOH HOH . E 5 HOH A 3 6 6 HOH HOH . E 5 HOH A 4 7 7 HOH HOH . E 5 HOH A 5 8 8 HOH HOH . E 5 HOH A 6 9 9 HOH HOH . E 5 HOH A 7 10 10 HOH HOH . E 5 HOH A 8 11 11 HOH HOH . E 5 HOH A 9 12 12 HOH HOH . E 5 HOH A 10 13 13 HOH HOH . E 5 HOH A 11 14 14 HOH HOH . E 5 HOH A 12 15 15 HOH HOH . E 5 HOH A 13 16 16 HOH HOH . E 5 HOH A 14 17 17 HOH HOH . E 5 HOH A 15 18 18 HOH HOH . E 5 HOH A 16 19 19 HOH HOH . E 5 HOH A 17 20 20 HOH HOH . E 5 HOH A 18 21 21 HOH HOH . E 5 HOH A 19 22 22 HOH HOH . E 5 HOH A 20 23 23 HOH HOH . E 5 HOH A 21 24 24 HOH HOH . E 5 HOH A 22 25 25 HOH HOH . E 5 HOH A 23 26 26 HOH HOH . E 5 HOH A 24 27 27 HOH HOH . E 5 HOH A 25 28 28 HOH HOH . E 5 HOH A 26 29 29 HOH HOH . E 5 HOH A 27 30 30 HOH HOH . E 5 HOH A 28 31 31 HOH HOH . E 5 HOH A 29 32 32 HOH HOH . E 5 HOH A 30 33 33 HOH HOH . E 5 HOH A 31 34 34 HOH HOH . E 5 HOH A 32 35 35 HOH HOH . E 5 HOH A 33 36 36 HOH HOH . E 5 HOH A 34 37 37 HOH HOH . E 5 HOH A 35 38 38 HOH HOH . E 5 HOH A 36 39 39 HOH HOH . E 5 HOH A 37 40 40 HOH HOH . E 5 HOH A 38 41 41 HOH HOH . E 5 HOH A 39 42 42 HOH HOH . E 5 HOH A 40 43 43 HOH HOH . E 5 HOH A 41 44 44 HOH HOH . E 5 HOH A 42 45 45 HOH HOH . E 5 HOH A 43 46 46 HOH HOH . E 5 HOH A 44 47 47 HOH HOH . E 5 HOH A 45 48 48 HOH HOH . E 5 HOH A 46 49 49 HOH HOH . E 5 HOH A 47 50 50 HOH HOH . E 5 HOH A 48 51 51 HOH HOH . E 5 HOH A 49 52 52 HOH HOH . E 5 HOH A 50 53 53 HOH HOH . E 5 HOH A 51 54 54 HOH HOH . E 5 HOH A 52 55 55 HOH HOH . E 5 HOH A 53 56 56 HOH HOH . E 5 HOH A 54 57 57 HOH HOH . E 5 HOH A 55 58 58 HOH HOH . E 5 HOH A 56 59 59 HOH HOH . E 5 HOH A 57 60 60 HOH HOH . E 5 HOH A 58 61 61 HOH HOH . E 5 HOH A 59 62 62 HOH HOH . E 5 HOH A 60 63 63 HOH HOH . E 5 HOH A 61 64 64 HOH HOH . E 5 HOH A 62 65 65 HOH HOH . E 5 HOH A 63 66 66 HOH HOH . E 5 HOH A 64 67 67 HOH HOH . E 5 HOH A 65 68 68 HOH HOH . E 5 HOH A 66 69 69 HOH HOH . E 5 HOH A 67 70 70 HOH HOH . E 5 HOH A 68 71 71 HOH HOH . E 5 HOH A 69 72 72 HOH HOH . E 5 HOH A 70 73 73 HOH HOH . E 5 HOH A 71 74 74 HOH HOH . E 5 HOH A 72 75 75 HOH HOH . E 5 HOH A 73 76 76 HOH HOH . E 5 HOH A 74 77 77 HOH HOH . E 5 HOH A 75 78 78 HOH HOH . E 5 HOH A 76 79 79 HOH HOH . E 5 HOH A 77 80 80 HOH HOH . E 5 HOH A 78 81 81 HOH HOH . E 5 HOH A 79 82 82 HOH HOH . E 5 HOH A 80 83 83 HOH HOH . E 5 HOH A 81 84 84 HOH HOH . E 5 HOH A 82 85 85 HOH HOH . E 5 HOH A 83 86 86 HOH HOH . E 5 HOH A 84 87 87 HOH HOH . E 5 HOH A 85 88 88 HOH HOH . E 5 HOH A 86 89 89 HOH HOH . E 5 HOH A 87 90 90 HOH HOH . E 5 HOH A 88 91 91 HOH HOH . E 5 HOH A 89 92 92 HOH HOH . E 5 HOH A 90 93 93 HOH HOH . E 5 HOH A 91 94 94 HOH HOH . E 5 HOH A 92 95 95 HOH HOH . E 5 HOH A 93 96 96 HOH HOH . E 5 HOH A 94 97 97 HOH HOH . E 5 HOH A 95 98 98 HOH HOH . E 5 HOH A 96 99 99 HOH HOH . E 5 HOH A 97 100 100 HOH HOH . E 5 HOH A 98 101 3 HOH MO6 . E 5 HOH A 99 102 3 HOH MO6 . E 5 HOH A 100 103 3 HOH MO6 . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CL _atom_site.label_atom_id CL _atom_site.label_comp_id CL _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 13.67 _atom_site.Cartn_y 51.098 _atom_site.Cartn_z 20.374 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 25.23 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CL _atom_site.auth_comp_id CL _atom_site.auth_seq_id 2 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #