data_2DDY # _model_server_result.job_id clzUtpobFd6YBJBpKM_Zvw _model_server_result.datetime_utc '2025-03-04 06:24:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ddy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":177}' # _entry.id 2DDY # _exptl.entry_id 2DDY _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ASP 59 A ASP 59 1_555 C CA CA . A CA 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.51 ? metalc ? metalc2 A NE2 HIS 69 A HIS 69 1_555 D ZN ZN . A ZN 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.531 ? metalc ? metalc3 A OD2 ASP 71 A ASP 71 1_555 D ZN ZN . A ZN 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? metalc ? metalc4 A OD2 ASP 76 A ASP 76 1_555 B CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc5 A OD1 ASP 76 A ASP 76 1_555 B CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.75 ? metalc ? metalc6 A O GLY 77 A GLY 77 1_555 B CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc7 A O GLY 79 A GLY 79 1_555 B CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc8 A O THR 81 A THR 81 1_555 B CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc9 A NE2 HIS 84 A HIS 84 1_555 D ZN ZN . A ZN 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? metalc ? metalc10 A O GLY 91 A GLY 91 1_555 C CA CA . A CA 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc11 A O GLY 93 A GLY 93 1_555 C CA CA . A CA 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc12 A OD2 ASP 95 A ASP 95 1_555 C CA CA . A CA 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc13 A OD1 ASP 95 A ASP 95 1_555 C CA CA . A CA 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc14 A ND1 HIS 97 A HIS 97 1_555 D ZN ZN . A ZN 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.277 ? metalc ? metalc15 A OD1 ASP 99 A ASP 99 1_555 B CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.129 ? metalc ? metalc16 A OE1 GLU 102 A GLU 102 1_555 B CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc17 A NE2 HIS 120 A HIS 120 1_555 E ZN ZN . A ZN 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc18 A NE2 HIS 124 A HIS 124 1_555 E ZN ZN . A ZN 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.163 ? metalc ? metalc19 A NE2 HIS 130 A HIS 130 1_555 E ZN ZN . A ZN 177 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc20 E ZN ZN . A ZN 177 1_555 F O15 MDW . A MDW 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2DDY _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 174 174 CA CA1 . C 2 CA A 1 175 175 CA CA2 . D 3 ZN A 1 176 176 ZN ZN3 . E 3 ZN A 1 177 177 ZN ZN4 . F 4 MDW A 1 178 178 MDW MDW . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 2.229 _atom_site.Cartn_y -0.198 _atom_site.Cartn_z 7.363 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 2 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 177 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 90 _model_server_stats.query_time_ms 6768 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #