data_2DFT # _model_server_result.job_id ZQv-_nmvJ5v7y79ztNyEZg _model_server_result.datetime_utc '2024-11-23 21:23:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dft # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":202}' # _entry.id 2DFT # _exptl.entry_id 2DFT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2DFT _cell.length_a 60.619 _cell.length_b 62.203 _cell.length_c 170.633 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DFT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 16 A SER 16 1_555 E MG MG . A MG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.832 ? metalc ? metalc2 G O2B ADP . A ADP 180 1_555 E MG MG . A MG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc3 G O3B ADP . A ADP 180 1_555 E MG MG . A MG 190 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.62 ? metalc ? metalc4 B OG SER 16 B SER 16 1_555 H MG MG . B MG 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.608 ? metalc ? metalc5 J O3B ADP . B ADP 181 1_555 H MG MG . B MG 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc6 J O2B ADP . B ADP 181 1_555 H MG MG . B MG 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.529 ? metalc ? metalc7 H MG MG . B MG 196 1_555 Q O HOH . B HOH 251 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? metalc ? metalc8 H MG MG . B MG 196 1_555 Q O HOH . B HOH 254 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc9 H MG MG . B MG 196 1_555 Q O HOH . B HOH 312 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc10 C OG SER 16 C SER 16 1_555 K MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc11 L O2B ADP . C ADP 182 1_555 K MG MG . C MG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc12 D OG SER 16 D SER 16 1_555 M MG MG . D MG 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc13 O O2B ADP . D ADP 183 1_555 M MG MG . D MG 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2DFT _atom_sites.fract_transf_matrix[1][1] 0.016497 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016076 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005861 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 MG A 1 190 190 MG MG . F 3 CL A 1 193 193 CL CL . G 4 ADP A 1 180 180 ADP ADP . H 2 MG B 1 196 196 MG MG . I 3 CL B 1 199 199 CL CL . J 4 ADP B 1 181 181 ADP ADP . K 2 MG C 1 202 202 MG MG . L 4 ADP C 1 182 182 ADP ADP . M 2 MG D 1 208 208 MG MG . N 3 CL D 1 211 211 CL CL . O 4 ADP D 1 183 183 ADP ADP . P 5 HOH A 1 222 222 HOH HOH . P 5 HOH A 2 223 223 HOH HOH . P 5 HOH A 3 224 224 HOH HOH . P 5 HOH A 4 243 243 HOH HOH . P 5 HOH A 5 244 244 HOH HOH . P 5 HOH A 6 245 245 HOH HOH . P 5 HOH A 7 246 246 HOH HOH . P 5 HOH A 8 247 247 HOH HOH . P 5 HOH A 9 248 248 HOH HOH . P 5 HOH A 10 255 255 HOH HOH . P 5 HOH A 11 257 257 HOH HOH . P 5 HOH A 12 260 260 HOH HOH . P 5 HOH A 13 261 261 HOH HOH . P 5 HOH A 14 262 262 HOH HOH . P 5 HOH A 15 265 265 HOH HOH . P 5 HOH A 16 266 266 HOH HOH . P 5 HOH A 17 267 267 HOH HOH . P 5 HOH A 18 268 268 HOH HOH . P 5 HOH A 19 269 269 HOH HOH . P 5 HOH A 20 270 270 HOH HOH . P 5 HOH A 21 273 273 HOH HOH . P 5 HOH A 22 278 278 HOH HOH . P 5 HOH A 23 279 279 HOH HOH . P 5 HOH A 24 280 280 HOH HOH . P 5 HOH A 25 294 294 HOH HOH . P 5 HOH A 26 295 295 HOH HOH . P 5 HOH A 27 296 296 HOH HOH . P 5 HOH A 28 297 297 HOH HOH . P 5 HOH A 29 298 298 HOH HOH . P 5 HOH A 30 299 299 HOH HOH . P 5 HOH A 31 300 300 HOH HOH . P 5 HOH A 32 301 301 HOH HOH . P 5 HOH A 33 303 303 HOH HOH . P 5 HOH A 34 314 314 HOH HOH . P 5 HOH A 35 315 315 HOH HOH . P 5 HOH A 36 317 317 HOH HOH . P 5 HOH A 37 318 318 HOH HOH . P 5 HOH A 38 323 323 HOH HOH . P 5 HOH A 39 332 332 HOH HOH . P 5 HOH A 40 343 343 HOH HOH . P 5 HOH A 41 378 378 HOH HOH . P 5 HOH A 42 379 379 HOH HOH . P 5 HOH A 43 380 380 HOH HOH . P 5 HOH A 44 381 381 HOH HOH . P 5 HOH A 45 382 382 HOH HOH . P 5 HOH A 46 383 383 HOH HOH . P 5 HOH A 47 384 384 HOH HOH . P 5 HOH A 48 387 387 HOH HOH . P 5 HOH A 49 397 397 HOH HOH . P 5 HOH A 50 398 398 HOH HOH . P 5 HOH A 51 419 419 HOH HOH . P 5 HOH A 52 423 423 HOH HOH . P 5 HOH A 53 424 424 HOH HOH . P 5 HOH A 54 425 425 HOH HOH . P 5 HOH A 55 434 434 HOH HOH . P 5 HOH A 56 435 435 HOH HOH . P 5 HOH A 57 436 436 HOH HOH . P 5 HOH A 58 438 438 HOH HOH . P 5 HOH A 59 449 449 HOH HOH . P 5 HOH A 60 461 461 HOH HOH . Q 5 HOH B 1 213 213 HOH HOH . Q 5 HOH B 2 214 214 HOH HOH . Q 5 HOH B 3 215 215 HOH HOH . Q 5 HOH B 4 216 216 HOH HOH . Q 5 HOH B 5 225 225 HOH HOH . Q 5 HOH B 6 227 227 HOH HOH . Q 5 HOH B 7 228 228 HOH HOH . Q 5 HOH B 8 229 229 HOH HOH . Q 5 HOH B 9 230 230 HOH HOH . Q 5 HOH B 10 234 234 HOH HOH . Q 5 HOH B 11 235 235 HOH HOH . Q 5 HOH B 12 249 249 HOH HOH . Q 5 HOH B 13 250 250 HOH HOH . Q 5 HOH B 14 251 251 HOH HOH . Q 5 HOH B 15 252 252 HOH HOH . Q 5 HOH B 16 253 253 HOH HOH . Q 5 HOH B 17 254 254 HOH HOH . Q 5 HOH B 18 256 256 HOH HOH . Q 5 HOH B 19 258 258 HOH HOH . Q 5 HOH B 20 259 259 HOH HOH . Q 5 HOH B 21 263 263 HOH HOH . Q 5 HOH B 22 264 264 HOH HOH . Q 5 HOH B 23 271 271 HOH HOH . Q 5 HOH B 24 293 293 HOH HOH . Q 5 HOH B 25 302 302 HOH HOH . Q 5 HOH B 26 304 304 HOH HOH . Q 5 HOH B 27 305 305 HOH HOH . Q 5 HOH B 28 306 306 HOH HOH . Q 5 HOH B 29 307 307 HOH HOH . Q 5 HOH B 30 308 308 HOH HOH . Q 5 HOH B 31 309 309 HOH HOH . Q 5 HOH B 32 310 310 HOH HOH . Q 5 HOH B 33 311 311 HOH HOH . Q 5 HOH B 34 312 312 HOH HOH . Q 5 HOH B 35 313 313 HOH HOH . Q 5 HOH B 36 341 341 HOH HOH . Q 5 HOH B 37 342 342 HOH HOH . Q 5 HOH B 38 357 357 HOH HOH . Q 5 HOH B 39 358 358 HOH HOH . Q 5 HOH B 40 359 359 HOH HOH . Q 5 HOH B 41 360 360 HOH HOH . Q 5 HOH B 42 361 361 HOH HOH . Q 5 HOH B 43 362 362 HOH HOH . Q 5 HOH B 44 363 363 HOH HOH . Q 5 HOH B 45 365 365 HOH HOH . Q 5 HOH B 46 366 366 HOH HOH . Q 5 HOH B 47 367 367 HOH HOH . Q 5 HOH B 48 368 368 HOH HOH . Q 5 HOH B 49 369 369 HOH HOH . Q 5 HOH B 50 370 370 HOH HOH . Q 5 HOH B 51 371 371 HOH HOH . Q 5 HOH B 52 372 372 HOH HOH . Q 5 HOH B 53 373 373 HOH HOH . Q 5 HOH B 54 374 374 HOH HOH . Q 5 HOH B 55 375 375 HOH HOH . Q 5 HOH B 56 377 377 HOH HOH . Q 5 HOH B 57 388 388 HOH HOH . Q 5 HOH B 58 389 389 HOH HOH . Q 5 HOH B 59 390 390 HOH HOH . Q 5 HOH B 60 391 391 HOH HOH . Q 5 HOH B 61 393 393 HOH HOH . Q 5 HOH B 62 400 400 HOH HOH . Q 5 HOH B 63 401 401 HOH HOH . Q 5 HOH B 64 422 422 HOH HOH . Q 5 HOH B 65 428 428 HOH HOH . Q 5 HOH B 66 429 429 HOH HOH . Q 5 HOH B 67 437 437 HOH HOH . Q 5 HOH B 68 439 439 HOH HOH . Q 5 HOH B 69 440 440 HOH HOH . Q 5 HOH B 70 441 441 HOH HOH . Q 5 HOH B 71 442 442 HOH HOH . Q 5 HOH B 72 443 443 HOH HOH . Q 5 HOH B 73 444 444 HOH HOH . Q 5 HOH B 74 447 447 HOH HOH . Q 5 HOH B 75 448 448 HOH HOH . Q 5 HOH B 76 450 450 HOH HOH . Q 5 HOH B 77 451 451 HOH HOH . Q 5 HOH B 78 452 452 HOH HOH . Q 5 HOH B 79 453 453 HOH HOH . Q 5 HOH B 80 454 454 HOH HOH . Q 5 HOH B 81 457 457 HOH HOH . Q 5 HOH B 82 467 467 HOH HOH . Q 5 HOH B 83 468 468 HOH HOH . Q 5 HOH B 84 469 469 HOH HOH . Q 5 HOH B 85 472 472 HOH HOH . R 5 HOH C 1 217 217 HOH HOH . R 5 HOH C 2 218 218 HOH HOH . R 5 HOH C 3 219 219 HOH HOH . R 5 HOH C 4 220 220 HOH HOH . R 5 HOH C 5 221 221 HOH HOH . R 5 HOH C 6 231 231 HOH HOH . R 5 HOH C 7 233 233 HOH HOH . R 5 HOH C 8 274 274 HOH HOH . R 5 HOH C 9 275 275 HOH HOH . R 5 HOH C 10 276 276 HOH HOH . R 5 HOH C 11 277 277 HOH HOH . R 5 HOH C 12 287 287 HOH HOH . R 5 HOH C 13 288 288 HOH HOH . R 5 HOH C 14 289 289 HOH HOH . R 5 HOH C 15 290 290 HOH HOH . R 5 HOH C 16 291 291 HOH HOH . R 5 HOH C 17 316 316 HOH HOH . R 5 HOH C 18 320 320 HOH HOH . R 5 HOH C 19 321 321 HOH HOH . R 5 HOH C 20 322 322 HOH HOH . R 5 HOH C 21 324 324 HOH HOH . R 5 HOH C 22 325 325 HOH HOH . R 5 HOH C 23 329 329 HOH HOH . R 5 HOH C 24 330 330 HOH HOH . R 5 HOH C 25 331 331 HOH HOH . R 5 HOH C 26 334 334 HOH HOH . R 5 HOH C 27 335 335 HOH HOH . R 5 HOH C 28 345 345 HOH HOH . R 5 HOH C 29 348 348 HOH HOH . R 5 HOH C 30 376 376 HOH HOH . R 5 HOH C 31 385 385 HOH HOH . R 5 HOH C 32 386 386 HOH HOH . R 5 HOH C 33 392 392 HOH HOH . R 5 HOH C 34 410 410 HOH HOH . R 5 HOH C 35 411 411 HOH HOH . R 5 HOH C 36 412 412 HOH HOH . R 5 HOH C 37 413 413 HOH HOH . R 5 HOH C 38 416 416 HOH HOH . R 5 HOH C 39 417 417 HOH HOH . R 5 HOH C 40 418 418 HOH HOH . R 5 HOH C 41 420 420 HOH HOH . R 5 HOH C 42 421 421 HOH HOH . R 5 HOH C 43 427 427 HOH HOH . R 5 HOH C 44 430 430 HOH HOH . R 5 HOH C 45 445 445 HOH HOH . R 5 HOH C 46 455 455 HOH HOH . R 5 HOH C 47 456 456 HOH HOH . R 5 HOH C 48 458 458 HOH HOH . R 5 HOH C 49 462 462 HOH HOH . R 5 HOH C 50 463 463 HOH HOH . R 5 HOH C 51 464 464 HOH HOH . S 5 HOH D 1 226 226 HOH HOH . S 5 HOH D 2 232 232 HOH HOH . S 5 HOH D 3 236 236 HOH HOH . S 5 HOH D 4 237 237 HOH HOH . S 5 HOH D 5 238 238 HOH HOH . S 5 HOH D 6 239 239 HOH HOH . S 5 HOH D 7 240 240 HOH HOH . S 5 HOH D 8 241 241 HOH HOH . S 5 HOH D 9 242 242 HOH HOH . S 5 HOH D 10 272 272 HOH HOH . S 5 HOH D 11 281 281 HOH HOH . S 5 HOH D 12 282 282 HOH HOH . S 5 HOH D 13 283 283 HOH HOH . S 5 HOH D 14 284 284 HOH HOH . S 5 HOH D 15 285 285 HOH HOH . S 5 HOH D 16 286 286 HOH HOH . S 5 HOH D 17 292 292 HOH HOH . S 5 HOH D 18 319 319 HOH HOH . S 5 HOH D 19 326 326 HOH HOH . S 5 HOH D 20 327 327 HOH HOH . S 5 HOH D 21 328 328 HOH HOH . S 5 HOH D 22 333 333 HOH HOH . S 5 HOH D 23 336 336 HOH HOH . S 5 HOH D 24 337 337 HOH HOH . S 5 HOH D 25 338 338 HOH HOH . S 5 HOH D 26 339 339 HOH HOH . S 5 HOH D 27 340 340 HOH HOH . S 5 HOH D 28 344 344 HOH HOH . S 5 HOH D 29 346 346 HOH HOH . S 5 HOH D 30 347 347 HOH HOH . S 5 HOH D 31 349 349 HOH HOH . S 5 HOH D 32 350 350 HOH HOH . S 5 HOH D 33 351 351 HOH HOH . S 5 HOH D 34 352 352 HOH HOH . S 5 HOH D 35 353 353 HOH HOH . S 5 HOH D 36 354 354 HOH HOH . S 5 HOH D 37 355 355 HOH HOH . S 5 HOH D 38 356 356 HOH HOH . S 5 HOH D 39 364 364 HOH HOH . S 5 HOH D 40 394 394 HOH HOH . S 5 HOH D 41 395 395 HOH HOH . S 5 HOH D 42 396 396 HOH HOH . S 5 HOH D 43 399 399 HOH HOH . S 5 HOH D 44 402 402 HOH HOH . S 5 HOH D 45 403 403 HOH HOH . S 5 HOH D 46 404 404 HOH HOH . S 5 HOH D 47 405 405 HOH HOH . S 5 HOH D 48 406 406 HOH HOH . S 5 HOH D 49 407 407 HOH HOH . S 5 HOH D 50 408 408 HOH HOH . S 5 HOH D 51 409 409 HOH HOH . S 5 HOH D 52 414 414 HOH HOH . S 5 HOH D 53 415 415 HOH HOH . S 5 HOH D 54 426 426 HOH HOH . S 5 HOH D 55 431 431 HOH HOH . S 5 HOH D 56 432 432 HOH HOH . S 5 HOH D 57 433 433 HOH HOH . S 5 HOH D 58 446 446 HOH HOH . S 5 HOH D 59 459 459 HOH HOH . S 5 HOH D 60 460 460 HOH HOH . S 5 HOH D 61 465 465 HOH HOH . S 5 HOH D 62 466 466 HOH HOH . S 5 HOH D 63 470 470 HOH HOH . S 5 HOH D 64 471 471 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 2 _atom_site.Cartn_x 18.576 _atom_site.Cartn_y 25.837 _atom_site.Cartn_z 52.368 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 202 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #