data_2DMR
#
_model_server_result.job_id            0Qp868tuLOpShgjAWIOntw 
_model_server_result.datetime_utc      '2024-10-14 08:23:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2dmr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":784}' 
#
_entry.id    2DMR 
#
_exptl.entry_id    2DMR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              95.94 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MOLYBDENUM(IV) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2DMR 
_cell.length_a            81.03 
_cell.length_b            81.03 
_cell.length_c            230.04 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2DMR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG SER 189 A SER 147 1_555 D MO 4MO . A 4MO 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? 
metalc ? metalc2 B S12 PGD . A PGD 782 1_555 D MO 4MO . A 4MO 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc3 B S13 PGD . A PGD 782 1_555 D MO 4MO . A 4MO 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? 
metalc ? metalc4 C S12 PGD . A PGD 783 1_555 D MO 4MO . A 4MO 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? 
metalc ? metalc5 C S13 PGD . A PGD 783 1_555 D MO 4MO . A 4MO 784 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
metalc ? metalc6 D MO 4MO . A 4MO 784 1_555 E O O . A O 785 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? 
hydrog ? hydrog1 A NE1 TRP 158 A TRP 116 1_555 E O O . A O 785 1_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? 
#
_chem_comp.formula           'Mo 4' 
_chem_comp.formula_weight    95.94 
_chem_comp.id                4MO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MOLYBDENUM(IV) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2DMR 
_atom_sites.fract_transf_matrix[1][1]    0.012341 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012341 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004347 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 PGD A 1 782 1 PGD PGD . 
C 2 PGD A 1 783 2 PGD PGD . 
D 3 4MO A 1 784 3 4MO 4MO . 
E 4 O A 1 785 4 O O . 
F 5 SO2 A 1 786 1 SO2 SO2 . 
G 6 HOH A 1 787 2 HOH HOH . 
G 6 HOH A 2 788 3 HOH HOH . 
G 6 HOH A 3 789 4 HOH HOH . 
G 6 HOH A 4 790 5 HOH HOH . 
G 6 HOH A 5 791 6 HOH HOH . 
G 6 HOH A 6 792 7 HOH HOH . 
G 6 HOH A 7 793 8 HOH HOH . 
G 6 HOH A 8 794 9 HOH HOH . 
G 6 HOH A 9 795 10 HOH HOH . 
G 6 HOH A 10 796 11 HOH HOH . 
G 6 HOH A 11 797 12 HOH HOH . 
G 6 HOH A 12 798 13 HOH HOH . 
G 6 HOH A 13 799 14 HOH HOH . 
G 6 HOH A 14 800 15 HOH HOH . 
G 6 HOH A 15 801 16 HOH HOH . 
G 6 HOH A 16 802 17 HOH HOH . 
G 6 HOH A 17 803 18 HOH HOH . 
G 6 HOH A 18 804 19 HOH HOH . 
G 6 HOH A 19 805 20 HOH HOH . 
G 6 HOH A 20 806 21 HOH HOH . 
G 6 HOH A 21 807 22 HOH HOH . 
G 6 HOH A 22 808 23 HOH HOH . 
G 6 HOH A 23 809 24 HOH HOH . 
G 6 HOH A 24 810 25 HOH HOH . 
G 6 HOH A 25 811 26 HOH HOH . 
G 6 HOH A 26 812 27 HOH HOH . 
G 6 HOH A 27 813 28 HOH HOH . 
G 6 HOH A 28 814 29 HOH HOH . 
G 6 HOH A 29 815 30 HOH HOH . 
G 6 HOH A 30 816 31 HOH HOH . 
G 6 HOH A 31 817 32 HOH HOH . 
G 6 HOH A 32 818 33 HOH HOH . 
G 6 HOH A 33 819 34 HOH HOH . 
G 6 HOH A 34 820 35 HOH HOH . 
G 6 HOH A 35 821 36 HOH HOH . 
G 6 HOH A 36 822 37 HOH HOH . 
G 6 HOH A 37 823 38 HOH HOH . 
G 6 HOH A 38 824 39 HOH HOH . 
G 6 HOH A 39 825 40 HOH HOH . 
G 6 HOH A 40 826 41 HOH HOH . 
G 6 HOH A 41 827 42 HOH HOH . 
G 6 HOH A 42 828 43 HOH HOH . 
G 6 HOH A 43 829 44 HOH HOH . 
G 6 HOH A 44 830 45 HOH HOH . 
G 6 HOH A 45 831 46 HOH HOH . 
G 6 HOH A 46 832 47 HOH HOH . 
G 6 HOH A 47 833 48 HOH HOH . 
G 6 HOH A 48 834 49 HOH HOH . 
G 6 HOH A 49 835 50 HOH HOH . 
G 6 HOH A 50 836 51 HOH HOH . 
G 6 HOH A 51 837 52 HOH HOH . 
G 6 HOH A 52 838 53 HOH HOH . 
G 6 HOH A 53 839 54 HOH HOH . 
G 6 HOH A 54 840 55 HOH HOH . 
G 6 HOH A 55 841 56 HOH HOH . 
G 6 HOH A 56 842 57 HOH HOH . 
G 6 HOH A 57 843 58 HOH HOH . 
G 6 HOH A 58 844 59 HOH HOH . 
G 6 HOH A 59 845 60 HOH HOH . 
G 6 HOH A 60 846 61 HOH HOH . 
G 6 HOH A 61 847 62 HOH HOH . 
G 6 HOH A 62 848 63 HOH HOH . 
G 6 HOH A 63 849 64 HOH HOH . 
G 6 HOH A 64 850 65 HOH HOH . 
G 6 HOH A 65 851 66 HOH HOH . 
G 6 HOH A 66 852 67 HOH HOH . 
G 6 HOH A 67 853 68 HOH HOH . 
G 6 HOH A 68 854 69 HOH HOH . 
G 6 HOH A 69 855 70 HOH HOH . 
G 6 HOH A 70 856 71 HOH HOH . 
G 6 HOH A 71 857 72 HOH HOH . 
G 6 HOH A 72 858 73 HOH HOH . 
G 6 HOH A 73 859 74 HOH HOH . 
G 6 HOH A 74 860 75 HOH HOH . 
G 6 HOH A 75 861 76 HOH HOH . 
G 6 HOH A 76 862 77 HOH HOH . 
G 6 HOH A 77 863 78 HOH HOH . 
G 6 HOH A 78 864 79 HOH HOH . 
G 6 HOH A 79 865 80 HOH HOH . 
G 6 HOH A 80 866 81 HOH HOH . 
G 6 HOH A 81 867 82 HOH HOH . 
G 6 HOH A 82 868 83 HOH HOH . 
G 6 HOH A 83 869 84 HOH HOH . 
G 6 HOH A 84 870 85 HOH HOH . 
G 6 HOH A 85 871 86 HOH HOH . 
G 6 HOH A 86 872 87 HOH HOH . 
G 6 HOH A 87 873 88 HOH HOH . 
G 6 HOH A 88 874 89 HOH HOH . 
G 6 HOH A 89 875 90 HOH HOH . 
G 6 HOH A 90 876 91 HOH HOH . 
G 6 HOH A 91 877 92 HOH HOH . 
G 6 HOH A 92 878 93 HOH HOH . 
G 6 HOH A 93 879 94 HOH HOH . 
G 6 HOH A 94 880 95 HOH HOH . 
G 6 HOH A 95 881 96 HOH HOH . 
G 6 HOH A 96 882 97 HOH HOH . 
G 6 HOH A 97 883 98 HOH HOH . 
G 6 HOH A 98 884 99 HOH HOH . 
G 6 HOH A 99 885 100 HOH HOH . 
G 6 HOH A 100 886 101 HOH HOH . 
G 6 HOH A 101 887 102 HOH HOH . 
G 6 HOH A 102 888 103 HOH HOH . 
G 6 HOH A 103 889 104 HOH HOH . 
G 6 HOH A 104 890 105 HOH HOH . 
G 6 HOH A 105 891 106 HOH HOH . 
G 6 HOH A 106 892 107 HOH HOH . 
G 6 HOH A 107 893 108 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MO 
_atom_site.label_atom_id         MO 
_atom_site.label_comp_id         4MO 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -5.097 
_atom_site.Cartn_y               46.282 
_atom_site.Cartn_z               32.222 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.78 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MO 
_atom_site.auth_comp_id          4MO 
_atom_site.auth_seq_id           784 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    23 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#