data_2DRY # _model_server_result.job_id k5UjWHnn1FxAqFS-W0y_ww _model_server_result.datetime_utc '2024-11-18 09:35:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dry # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2002}' # _entry.id 2DRY # _exptl.entry_id 2DRY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.39 _cell.angle_gamma 90 _cell.entry_id 2DRY _cell.length_a 40.151 _cell.length_b 89.562 _cell.length_c 41.67 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DRY _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,I 1 1 B,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 294 n n S O2 SO4 doub 295 n n S O3 SO4 sing 296 n n S O4 SO4 sing 297 n n # _atom_sites.entry_id 2DRY _atom_sites.fract_transf_matrix[1][1] 0.024906 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.01236 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011165 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 2001 1 SO4 SO4 . D 2 SO4 A 1 2002 2 SO4 SO4 . E 2 SO4 A 1 2003 3 SO4 SO4 . F 2 SO4 A 1 2004 4 SO4 SO4 . G 3 PGE A 1 1002 2 PGE PEG . H 3 PGE B 1 1001 1 PGE PEG . I 4 HOH A 1 2005 1 HOH HOH . I 4 HOH A 2 2006 3 HOH HOH . I 4 HOH A 3 2007 6 HOH HOH . I 4 HOH A 4 2008 7 HOH HOH . I 4 HOH A 5 2009 8 HOH HOH . I 4 HOH A 6 2010 9 HOH HOH . I 4 HOH A 7 2011 10 HOH HOH . I 4 HOH A 8 2012 15 HOH HOH . I 4 HOH A 9 2013 16 HOH HOH . I 4 HOH A 10 2014 18 HOH HOH . I 4 HOH A 11 2015 21 HOH HOH . I 4 HOH A 12 2016 24 HOH HOH . I 4 HOH A 13 2017 29 HOH HOH . I 4 HOH A 14 2018 32 HOH HOH . I 4 HOH A 15 2019 35 HOH HOH . I 4 HOH A 16 2020 37 HOH HOH . I 4 HOH A 17 2021 38 HOH HOH . I 4 HOH A 18 2022 40 HOH HOH . I 4 HOH A 19 2023 44 HOH HOH . I 4 HOH A 20 2024 45 HOH HOH . I 4 HOH A 21 2025 46 HOH HOH . I 4 HOH A 22 2026 56 HOH HOH . I 4 HOH A 23 2027 57 HOH HOH . I 4 HOH A 24 2028 58 HOH HOH . I 4 HOH A 25 2029 59 HOH HOH . I 4 HOH A 26 2030 62 HOH HOH . I 4 HOH A 27 2031 63 HOH HOH . I 4 HOH A 28 2032 64 HOH HOH . I 4 HOH A 29 2033 65 HOH HOH . I 4 HOH A 30 2034 69 HOH HOH . I 4 HOH A 31 2035 70 HOH HOH . I 4 HOH A 32 2036 72 HOH HOH . I 4 HOH A 33 2037 73 HOH HOH . I 4 HOH A 34 2038 77 HOH HOH . I 4 HOH A 35 2039 81 HOH HOH . I 4 HOH A 36 2040 82 HOH HOH . I 4 HOH A 37 2041 84 HOH HOH . I 4 HOH A 38 2042 87 HOH HOH . I 4 HOH A 39 2043 90 HOH HOH . I 4 HOH A 40 2044 95 HOH HOH . I 4 HOH A 41 2045 97 HOH HOH . I 4 HOH A 42 2046 99 HOH HOH . I 4 HOH A 43 2047 102 HOH HOH . I 4 HOH A 44 2048 103 HOH HOH . I 4 HOH A 45 2049 108 HOH HOH . I 4 HOH A 46 2050 110 HOH HOH . I 4 HOH A 47 2051 113 HOH HOH . I 4 HOH A 48 2052 114 HOH HOH . I 4 HOH A 49 2053 115 HOH HOH . I 4 HOH A 50 2054 117 HOH HOH . I 4 HOH A 51 2055 118 HOH HOH . I 4 HOH A 52 2056 127 HOH HOH . I 4 HOH A 53 2057 128 HOH HOH . I 4 HOH A 54 2058 131 HOH HOH . I 4 HOH A 55 2059 134 HOH HOH . I 4 HOH A 56 2060 138 HOH HOH . I 4 HOH A 57 2061 139 HOH HOH . I 4 HOH A 58 2062 140 HOH HOH . I 4 HOH A 59 2063 141 HOH HOH . I 4 HOH A 60 2064 145 HOH HOH . I 4 HOH A 61 2065 151 HOH HOH . I 4 HOH A 62 2066 154 HOH HOH . I 4 HOH A 63 2067 157 HOH HOH . I 4 HOH A 64 2068 159 HOH HOH . I 4 HOH A 65 2069 162 HOH HOH . I 4 HOH A 66 2070 163 HOH HOH . I 4 HOH A 67 2071 166 HOH HOH . I 4 HOH A 68 2072 167 HOH HOH . I 4 HOH A 69 2073 168 HOH HOH . I 4 HOH A 70 2074 170 HOH HOH . I 4 HOH A 71 2075 173 HOH HOH . I 4 HOH A 72 2076 175 HOH HOH . I 4 HOH A 73 2077 176 HOH HOH . I 4 HOH A 74 2078 178 HOH HOH . I 4 HOH A 75 2079 180 HOH HOH . I 4 HOH A 76 2080 181 HOH HOH . I 4 HOH A 77 2081 182 HOH HOH . I 4 HOH A 78 2082 185 HOH HOH . I 4 HOH A 79 2083 187 HOH HOH . I 4 HOH A 80 2084 188 HOH HOH . I 4 HOH A 81 2085 190 HOH HOH . I 4 HOH A 82 2086 191 HOH HOH . I 4 HOH A 83 2087 192 HOH HOH . I 4 HOH A 84 2088 194 HOH HOH . I 4 HOH A 85 2089 196 HOH HOH . I 4 HOH A 86 2090 197 HOH HOH . I 4 HOH A 87 2091 198 HOH HOH . I 4 HOH A 88 2092 199 HOH HOH . I 4 HOH A 89 2093 200 HOH HOH . I 4 HOH A 90 2094 201 HOH HOH . I 4 HOH A 91 2095 202 HOH HOH . I 4 HOH A 92 2096 203 HOH HOH . I 4 HOH A 93 2097 204 HOH HOH . I 4 HOH A 94 2098 208 HOH HOH . I 4 HOH A 95 2099 211 HOH HOH . I 4 HOH A 96 2100 212 HOH HOH . I 4 HOH A 97 2101 213 HOH HOH . I 4 HOH A 98 2102 215 HOH HOH . I 4 HOH A 99 2103 218 HOH HOH . I 4 HOH A 100 2104 219 HOH HOH . I 4 HOH A 101 2105 221 HOH HOH . I 4 HOH A 102 2106 222 HOH HOH . I 4 HOH A 103 2107 223 HOH HOH . I 4 HOH A 104 2108 226 HOH HOH . I 4 HOH A 105 2109 227 HOH HOH . I 4 HOH A 106 2110 229 HOH HOH . I 4 HOH A 107 2111 233 HOH HOH . I 4 HOH A 108 2112 234 HOH HOH . I 4 HOH A 109 2113 235 HOH HOH . I 4 HOH A 110 2114 236 HOH HOH . I 4 HOH A 111 2115 238 HOH HOH . I 4 HOH A 112 2116 240 HOH HOH . I 4 HOH A 113 2117 242 HOH HOH . I 4 HOH A 114 2118 243 HOH HOH . I 4 HOH A 115 2119 247 HOH HOH . I 4 HOH A 116 2120 250 HOH HOH . I 4 HOH A 117 2121 254 HOH HOH . I 4 HOH A 118 2122 257 HOH HOH . I 4 HOH A 119 2123 259 HOH HOH . I 4 HOH A 120 2124 261 HOH HOH . I 4 HOH A 121 2125 264 HOH HOH . I 4 HOH A 122 2126 267 HOH HOH . I 4 HOH A 123 2127 271 HOH HOH . I 4 HOH A 124 2128 276 HOH HOH . I 4 HOH A 125 2129 278 HOH HOH . I 4 HOH A 126 2130 279 HOH HOH . I 4 HOH A 127 2131 280 HOH HOH . I 4 HOH A 128 2132 281 HOH HOH . I 4 HOH A 129 2133 283 HOH HOH . J 4 HOH B 1 1002 2 HOH HOH . J 4 HOH B 2 1003 4 HOH HOH . J 4 HOH B 3 1004 5 HOH HOH . J 4 HOH B 4 1005 11 HOH HOH . J 4 HOH B 5 1006 12 HOH HOH . J 4 HOH B 6 1007 13 HOH HOH . J 4 HOH B 7 1008 14 HOH HOH . J 4 HOH B 8 1009 19 HOH HOH . J 4 HOH B 9 1010 20 HOH HOH . J 4 HOH B 10 1011 22 HOH HOH . J 4 HOH B 11 1012 23 HOH HOH . J 4 HOH B 12 1013 25 HOH HOH . J 4 HOH B 13 1014 26 HOH HOH . J 4 HOH B 14 1015 27 HOH HOH . J 4 HOH B 15 1016 28 HOH HOH . J 4 HOH B 16 1017 30 HOH HOH . J 4 HOH B 17 1018 31 HOH HOH . J 4 HOH B 18 1019 33 HOH HOH . J 4 HOH B 19 1020 34 HOH HOH . J 4 HOH B 20 1021 36 HOH HOH . J 4 HOH B 21 1022 39 HOH HOH . J 4 HOH B 22 1023 41 HOH HOH . J 4 HOH B 23 1024 42 HOH HOH . J 4 HOH B 24 1025 43 HOH HOH . J 4 HOH B 25 1026 47 HOH HOH . J 4 HOH B 26 1027 48 HOH HOH . J 4 HOH B 27 1028 51 HOH HOH . J 4 HOH B 28 1029 52 HOH HOH . J 4 HOH B 29 1030 53 HOH HOH . J 4 HOH B 30 1031 55 HOH HOH . J 4 HOH B 31 1032 60 HOH HOH . J 4 HOH B 32 1033 61 HOH HOH . J 4 HOH B 33 1034 66 HOH HOH . J 4 HOH B 34 1035 67 HOH HOH . J 4 HOH B 35 1036 68 HOH HOH . J 4 HOH B 36 1037 71 HOH HOH . J 4 HOH B 37 1038 74 HOH HOH . J 4 HOH B 38 1039 76 HOH HOH . J 4 HOH B 39 1040 85 HOH HOH . J 4 HOH B 40 1041 88 HOH HOH . J 4 HOH B 41 1042 89 HOH HOH . J 4 HOH B 42 1043 91 HOH HOH . J 4 HOH B 43 1044 94 HOH HOH . J 4 HOH B 44 1045 96 HOH HOH . J 4 HOH B 45 1046 98 HOH HOH . J 4 HOH B 46 1047 100 HOH HOH . J 4 HOH B 47 1048 101 HOH HOH . J 4 HOH B 48 1049 104 HOH HOH . J 4 HOH B 49 1050 105 HOH HOH . J 4 HOH B 50 1051 106 HOH HOH . J 4 HOH B 51 1052 107 HOH HOH . J 4 HOH B 52 1053 109 HOH HOH . J 4 HOH B 53 1054 111 HOH HOH . J 4 HOH B 54 1055 112 HOH HOH . J 4 HOH B 55 1056 116 HOH HOH . J 4 HOH B 56 1057 119 HOH HOH . J 4 HOH B 57 1058 120 HOH HOH . J 4 HOH B 58 1059 121 HOH HOH . J 4 HOH B 59 1060 122 HOH HOH . J 4 HOH B 60 1061 123 HOH HOH . J 4 HOH B 61 1062 124 HOH HOH . J 4 HOH B 62 1063 125 HOH HOH . J 4 HOH B 63 1064 126 HOH HOH . J 4 HOH B 64 1065 130 HOH HOH . J 4 HOH B 65 1066 132 HOH HOH . J 4 HOH B 66 1067 133 HOH HOH . J 4 HOH B 67 1068 142 HOH HOH . J 4 HOH B 68 1069 143 HOH HOH . J 4 HOH B 69 1070 147 HOH HOH . J 4 HOH B 70 1071 149 HOH HOH . J 4 HOH B 71 1072 150 HOH HOH . J 4 HOH B 72 1073 152 HOH HOH . J 4 HOH B 73 1074 153 HOH HOH . J 4 HOH B 74 1075 155 HOH HOH . J 4 HOH B 75 1076 158 HOH HOH . J 4 HOH B 76 1077 160 HOH HOH . J 4 HOH B 77 1078 161 HOH HOH . J 4 HOH B 78 1079 164 HOH HOH . J 4 HOH B 79 1080 171 HOH HOH . J 4 HOH B 80 1081 172 HOH HOH . J 4 HOH B 81 1082 174 HOH HOH . J 4 HOH B 82 1083 177 HOH HOH . J 4 HOH B 83 1084 179 HOH HOH . J 4 HOH B 84 1085 183 HOH HOH . J 4 HOH B 85 1086 184 HOH HOH . J 4 HOH B 86 1087 186 HOH HOH . J 4 HOH B 87 1088 189 HOH HOH . J 4 HOH B 88 1089 193 HOH HOH . J 4 HOH B 89 1090 195 HOH HOH . J 4 HOH B 90 1091 205 HOH HOH . J 4 HOH B 91 1092 206 HOH HOH . J 4 HOH B 92 1093 209 HOH HOH . J 4 HOH B 93 1094 216 HOH HOH . J 4 HOH B 94 1095 217 HOH HOH . J 4 HOH B 95 1096 220 HOH HOH . J 4 HOH B 96 1097 224 HOH HOH . J 4 HOH B 97 1098 225 HOH HOH . J 4 HOH B 98 1099 228 HOH HOH . J 4 HOH B 99 1100 231 HOH HOH . J 4 HOH B 100 1101 232 HOH HOH . J 4 HOH B 101 1102 237 HOH HOH . J 4 HOH B 102 1103 239 HOH HOH . J 4 HOH B 103 1104 241 HOH HOH . J 4 HOH B 104 1105 244 HOH HOH . J 4 HOH B 105 1106 245 HOH HOH . J 4 HOH B 106 1107 246 HOH HOH . J 4 HOH B 107 1108 249 HOH HOH . J 4 HOH B 108 1109 251 HOH HOH . J 4 HOH B 109 1110 252 HOH HOH . J 4 HOH B 110 1111 253 HOH HOH . J 4 HOH B 111 1112 255 HOH HOH . J 4 HOH B 112 1113 256 HOH HOH . J 4 HOH B 113 1114 258 HOH HOH . J 4 HOH B 114 1115 260 HOH HOH . J 4 HOH B 115 1116 263 HOH HOH . J 4 HOH B 116 1117 266 HOH HOH . J 4 HOH B 117 1118 268 HOH HOH . J 4 HOH B 118 1119 269 HOH HOH . J 4 HOH B 119 1120 272 HOH HOH . J 4 HOH B 120 1121 274 HOH HOH . J 4 HOH B 121 1122 275 HOH HOH . J 4 HOH B 122 1123 282 HOH HOH . J 4 HOH B 123 1124 284 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 -8.374 -4.374 33.726 0.5 32.12 ? S SO4 2002 A 1 HETATM 2 O O1 SO4 . . . D 2 -7.981 -3.107 33.087 0.5 33.36 ? O1 SO4 2002 A 1 HETATM 3 O O2 SO4 . . . D 2 -9.57 -4.917 33.055 0.5 32.01 ? O2 SO4 2002 A 1 HETATM 4 O O3 SO4 . . . D 2 -8.686 -4.126 35.146 0.5 32.75 ? O3 SO4 2002 A 1 HETATM 5 O O4 SO4 . . . D 2 -7.268 -5.342 33.624 0.5 31.71 ? O4 SO4 2002 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 38 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #