data_2DS8 # _model_server_result.job_id pIV3TOjLiu4vzYaYtTCAUA _model_server_result.datetime_utc '2024-12-22 11:46:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ds8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":100}' # _entry.id 2DS8 # _exptl.entry_id 2DS8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2DS8 _cell.length_a 32.554 _cell.length_b 46.548 _cell.length_c 57.037 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DS8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 14 A CYS 14 1_555 E ZN ZN . A ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? metalc ? metalc2 A SG CYS 17 A CYS 17 1_555 E ZN ZN . A ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc3 A SG CYS 36 A CYS 36 1_555 E ZN ZN . A ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc4 A SG CYS 39 A CYS 39 1_555 E ZN ZN . A ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc5 C SG CYS 14 B CYS 14 1_555 F ZN ZN . B ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc6 C SG CYS 17 B CYS 17 1_555 F ZN ZN . B ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? metalc ? metalc7 C SG CYS 36 B CYS 36 1_555 F ZN ZN . B ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc8 C SG CYS 39 B CYS 39 1_555 F ZN ZN . B ZN 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2DS8 _atom_sites.fract_transf_matrix[1][1] 0.030718 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021483 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017532 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN A 1 100 100 ZN ZN . F 3 ZN B 1 100 100 ZN ZN . G 4 HOH A 1 101 1 HOH HOH . G 4 HOH A 2 102 3 HOH HOH . G 4 HOH A 3 103 10 HOH HOH . G 4 HOH A 4 104 11 HOH HOH . G 4 HOH A 5 105 13 HOH HOH . G 4 HOH A 6 106 14 HOH HOH . G 4 HOH A 7 107 15 HOH HOH . G 4 HOH A 8 108 17 HOH HOH . G 4 HOH A 9 109 18 HOH HOH . G 4 HOH A 10 110 20 HOH HOH . G 4 HOH A 11 111 22 HOH HOH . G 4 HOH A 12 112 25 HOH HOH . G 4 HOH A 13 113 26 HOH HOH . G 4 HOH A 14 114 32 HOH HOH . G 4 HOH A 15 115 36 HOH HOH . G 4 HOH A 16 116 38 HOH HOH . G 4 HOH A 17 117 40 HOH HOH . G 4 HOH A 18 118 43 HOH HOH . G 4 HOH A 19 119 45 HOH HOH . G 4 HOH A 20 120 47 HOH HOH . G 4 HOH A 21 121 55 HOH HOH . G 4 HOH A 22 122 57 HOH HOH . G 4 HOH A 23 123 59 HOH HOH . G 4 HOH A 24 124 62 HOH HOH . G 4 HOH A 25 125 69 HOH HOH . G 4 HOH A 26 126 72 HOH HOH . G 4 HOH A 27 127 73 HOH HOH . G 4 HOH A 28 128 76 HOH HOH . G 4 HOH A 29 129 77 HOH HOH . G 4 HOH A 30 130 78 HOH HOH . G 4 HOH A 31 131 79 HOH HOH . G 4 HOH A 32 132 80 HOH HOH . G 4 HOH A 33 133 81 HOH HOH . G 4 HOH A 34 134 83 HOH HOH . H 4 HOH P 1 21 21 HOH HOH . H 4 HOH P 2 33 33 HOH HOH . H 4 HOH P 3 34 34 HOH HOH . H 4 HOH P 4 39 39 HOH HOH . H 4 HOH P 5 53 53 HOH HOH . H 4 HOH P 6 56 56 HOH HOH . H 4 HOH P 7 63 63 HOH HOH . H 4 HOH P 8 65 65 HOH HOH . H 4 HOH P 9 74 74 HOH HOH . I 4 HOH B 1 101 2 HOH HOH . I 4 HOH B 2 102 4 HOH HOH . I 4 HOH B 3 103 5 HOH HOH . I 4 HOH B 4 104 6 HOH HOH . I 4 HOH B 5 105 7 HOH HOH . I 4 HOH B 6 106 8 HOH HOH . I 4 HOH B 7 107 16 HOH HOH . I 4 HOH B 8 108 19 HOH HOH . I 4 HOH B 9 109 24 HOH HOH . I 4 HOH B 10 110 27 HOH HOH . I 4 HOH B 11 111 28 HOH HOH . I 4 HOH B 12 112 29 HOH HOH . I 4 HOH B 13 113 30 HOH HOH . I 4 HOH B 14 114 31 HOH HOH . I 4 HOH B 15 115 35 HOH HOH . I 4 HOH B 16 116 37 HOH HOH . I 4 HOH B 17 117 41 HOH HOH . I 4 HOH B 18 118 42 HOH HOH . I 4 HOH B 19 119 44 HOH HOH . I 4 HOH B 20 120 46 HOH HOH . I 4 HOH B 21 121 48 HOH HOH . I 4 HOH B 22 122 51 HOH HOH . I 4 HOH B 23 123 52 HOH HOH . I 4 HOH B 24 124 54 HOH HOH . I 4 HOH B 25 125 60 HOH HOH . I 4 HOH B 26 126 61 HOH HOH . I 4 HOH B 27 127 66 HOH HOH . I 4 HOH B 28 128 68 HOH HOH . I 4 HOH B 29 129 70 HOH HOH . I 4 HOH B 30 130 71 HOH HOH . I 4 HOH B 31 131 75 HOH HOH . I 4 HOH B 32 132 82 HOH HOH . I 4 HOH B 33 133 85 HOH HOH . I 4 HOH B 34 134 86 HOH HOH . J 4 HOH Q 1 9 9 HOH HOH . J 4 HOH Q 2 12 12 HOH HOH . J 4 HOH Q 3 23 23 HOH HOH . J 4 HOH Q 4 49 49 HOH HOH . J 4 HOH Q 5 50 50 HOH HOH . J 4 HOH Q 6 58 58 HOH HOH . J 4 HOH Q 7 64 64 HOH HOH . J 4 HOH Q 8 67 67 HOH HOH . J 4 HOH Q 9 84 84 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -6.884 _atom_site.Cartn_y 13.923 _atom_site.Cartn_z -8.398 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 14.04 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 100 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 1 #