data_2DSA # _model_server_result.job_id 12pXjXsp42G6F7D9QbICYw _model_server_result.datetime_utc '2024-10-25 20:19:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dsa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1225}' # _entry.id 2DSA # _exptl.entry_id 2DSA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 218.205 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2Z,4E)-2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2DSA _cell.length_a 112.2 _cell.length_b 112.2 _cell.length_c 221.9 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DSA _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # _chem_comp.formula 'C12 H10 O4' _chem_comp.formula_weight 218.205 _chem_comp.id HPX _chem_comp.mon_nstd_flag . _chem_comp.name '(2Z,4E)-2-HYDROXY-6-OXO-6-PHENYLHEXA-2,4-DIENOIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CB3 CB4 HPX sing 188 n y CB3 CB2 HPX doub 189 n y CB3 HB3 HPX sing 190 n n CB4 CB5 HPX doub 191 n y CB4 HB4 HPX sing 192 n n CB5 CB6 HPX sing 193 n y CB5 HB5 HPX sing 194 n n CB6 CB1 HPX doub 195 n y CB6 HB6 HPX sing 196 n n CB1 CB2 HPX sing 197 n y CB1 CA6 HPX sing 198 n n CB2 HB2 HPX sing 199 n n CA6 OA4 HPX doub 200 n n CA6 CA5 HPX sing 201 n n CA5 CA4 HPX doub 202 e n CA5 HA5 HPX sing 203 n n CA4 CA3 HPX sing 204 n n CA4 HA4 HPX sing 205 n n CA3 CA2 HPX doub 206 z n CA3 H1 HPX sing 207 n n CA2 OA3 HPX sing 208 n n CA2 CA1 HPX sing 209 n n OA3 HA3 HPX sing 210 n n CA1 OA2 HPX sing 211 n n CA1 OA1 HPX doub 212 n n OA2 HA2 HPX sing 213 n n # _atom_sites.entry_id 2DSA _atom_sites.fract_transf_matrix[1][1] 0.008912 _atom_sites.fract_transf_matrix[1][2] 0.005145 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010291 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GSH A 1 1224 224 GSH GTT . F 3 HPX A 1 1225 225 HPX HPD . G 2 GSH B 1 2224 224 GSH GTT . H 3 HPX B 1 2225 225 HPX HPD . I 2 GSH C 1 3224 224 GSH GTT . J 3 HPX C 1 3225 225 HPX HPD . K 2 GSH D 1 4224 224 GSH GTT . L 3 HPX D 1 4225 225 HPX HPD . M 4 HOH A 1 1226 2 HOH HOH . M 4 HOH A 2 1227 13 HOH HOH . M 4 HOH A 3 1228 16 HOH HOH . M 4 HOH A 4 1229 20 HOH HOH . M 4 HOH A 5 1230 24 HOH HOH . M 4 HOH A 6 1231 25 HOH HOH . M 4 HOH A 7 1232 27 HOH HOH . M 4 HOH A 8 1233 41 HOH HOH . M 4 HOH A 9 1234 42 HOH HOH . M 4 HOH A 10 1235 46 HOH HOH . M 4 HOH A 11 1236 51 HOH HOH . M 4 HOH A 12 1237 54 HOH HOH . M 4 HOH A 13 1238 62 HOH HOH . M 4 HOH A 14 1239 63 HOH HOH . M 4 HOH A 15 1240 67 HOH HOH . M 4 HOH A 16 1241 68 HOH HOH . M 4 HOH A 17 1242 69 HOH HOH . M 4 HOH A 18 1243 71 HOH HOH . M 4 HOH A 19 1244 76 HOH HOH . M 4 HOH A 20 1245 80 HOH HOH . M 4 HOH A 21 1246 81 HOH HOH . M 4 HOH A 22 1247 84 HOH HOH . M 4 HOH A 23 1248 96 HOH HOH . M 4 HOH A 24 1249 101 HOH HOH . M 4 HOH A 25 1250 102 HOH HOH . M 4 HOH A 26 1251 111 HOH HOH . M 4 HOH A 27 1252 113 HOH HOH . M 4 HOH A 28 1253 114 HOH HOH . M 4 HOH A 29 1254 115 HOH HOH . M 4 HOH A 30 1255 126 HOH HOH . M 4 HOH A 31 1256 127 HOH HOH . M 4 HOH A 32 1257 130 HOH HOH . M 4 HOH A 33 1258 133 HOH HOH . M 4 HOH A 34 1259 149 HOH HOH . M 4 HOH A 35 1260 167 HOH HOH . M 4 HOH A 36 1261 198 HOH HOH . M 4 HOH A 37 1262 210 HOH HOH . M 4 HOH A 38 1263 241 HOH HOH . M 4 HOH A 39 1264 242 HOH HOH . M 4 HOH A 40 1265 263 HOH HOH . M 4 HOH A 41 1266 278 HOH HOH . M 4 HOH A 42 1267 299 HOH HOH . M 4 HOH A 43 1268 303 HOH HOH . M 4 HOH A 44 1269 338 HOH HOH . M 4 HOH A 45 1270 343 HOH HOH . M 4 HOH A 46 1271 380 HOH HOH . M 4 HOH A 47 1272 381 HOH HOH . M 4 HOH A 48 1273 391 HOH HOH . M 4 HOH A 49 1274 402 HOH HOH . M 4 HOH A 50 1275 434 HOH HOH . M 4 HOH A 51 1276 446 HOH HOH . M 4 HOH A 52 1277 473 HOH HOH . N 4 HOH B 1 2226 1 HOH HOH . N 4 HOH B 2 2227 6 HOH HOH . N 4 HOH B 3 2228 11 HOH HOH . N 4 HOH B 4 2229 12 HOH HOH . N 4 HOH B 5 2230 18 HOH HOH . N 4 HOH B 6 2231 26 HOH HOH . N 4 HOH B 7 2232 29 HOH HOH . N 4 HOH B 8 2233 33 HOH HOH . N 4 HOH B 9 2234 35 HOH HOH . N 4 HOH B 10 2235 37 HOH HOH . N 4 HOH B 11 2236 38 HOH HOH . N 4 HOH B 12 2237 40 HOH HOH . N 4 HOH B 13 2238 43 HOH HOH . N 4 HOH B 14 2239 44 HOH HOH . N 4 HOH B 15 2240 50 HOH HOH . N 4 HOH B 16 2241 64 HOH HOH . N 4 HOH B 17 2242 66 HOH HOH . N 4 HOH B 18 2243 73 HOH HOH . N 4 HOH B 19 2244 77 HOH HOH . N 4 HOH B 20 2245 93 HOH HOH . N 4 HOH B 21 2246 97 HOH HOH . N 4 HOH B 22 2247 100 HOH HOH . N 4 HOH B 23 2248 110 HOH HOH . N 4 HOH B 24 2249 112 HOH HOH . N 4 HOH B 25 2250 123 HOH HOH . N 4 HOH B 26 2251 128 HOH HOH . N 4 HOH B 27 2252 139 HOH HOH . N 4 HOH B 28 2253 140 HOH HOH . N 4 HOH B 29 2254 151 HOH HOH . N 4 HOH B 30 2255 160 HOH HOH . N 4 HOH B 31 2256 169 HOH HOH . N 4 HOH B 32 2257 171 HOH HOH . N 4 HOH B 33 2258 178 HOH HOH . N 4 HOH B 34 2259 183 HOH HOH . N 4 HOH B 35 2260 209 HOH HOH . N 4 HOH B 36 2261 226 HOH HOH . N 4 HOH B 37 2262 235 HOH HOH . N 4 HOH B 38 2263 240 HOH HOH . N 4 HOH B 39 2264 243 HOH HOH . N 4 HOH B 40 2265 264 HOH HOH . N 4 HOH B 41 2266 270 HOH HOH . N 4 HOH B 42 2267 279 HOH HOH . N 4 HOH B 43 2268 292 HOH HOH . N 4 HOH B 44 2269 309 HOH HOH . N 4 HOH B 45 2270 364 HOH HOH . N 4 HOH B 46 2271 394 HOH HOH . N 4 HOH B 47 2272 445 HOH HOH . N 4 HOH B 48 2273 498 HOH HOH . O 4 HOH C 1 3226 7 HOH HOH . O 4 HOH C 2 3227 9 HOH HOH . O 4 HOH C 3 3228 10 HOH HOH . O 4 HOH C 4 3229 14 HOH HOH . O 4 HOH C 5 3230 17 HOH HOH . O 4 HOH C 6 3231 19 HOH HOH . O 4 HOH C 7 3232 21 HOH HOH . O 4 HOH C 8 3233 22 HOH HOH . O 4 HOH C 9 3234 30 HOH HOH . O 4 HOH C 10 3235 39 HOH HOH . O 4 HOH C 11 3236 45 HOH HOH . O 4 HOH C 12 3237 48 HOH HOH . O 4 HOH C 13 3238 55 HOH HOH . O 4 HOH C 14 3239 57 HOH HOH . O 4 HOH C 15 3240 59 HOH HOH . O 4 HOH C 16 3241 60 HOH HOH . O 4 HOH C 17 3242 65 HOH HOH . O 4 HOH C 18 3243 78 HOH HOH . O 4 HOH C 19 3244 86 HOH HOH . O 4 HOH C 20 3245 87 HOH HOH . O 4 HOH C 21 3246 88 HOH HOH . O 4 HOH C 22 3247 90 HOH HOH . O 4 HOH C 23 3248 92 HOH HOH . O 4 HOH C 24 3249 94 HOH HOH . O 4 HOH C 25 3250 98 HOH HOH . O 4 HOH C 26 3251 106 HOH HOH . O 4 HOH C 27 3252 116 HOH HOH . O 4 HOH C 28 3253 120 HOH HOH . O 4 HOH C 29 3254 138 HOH HOH . O 4 HOH C 30 3255 141 HOH HOH . O 4 HOH C 31 3256 150 HOH HOH . O 4 HOH C 32 3257 154 HOH HOH . O 4 HOH C 33 3258 158 HOH HOH . O 4 HOH C 34 3259 186 HOH HOH . O 4 HOH C 35 3260 191 HOH HOH . O 4 HOH C 36 3261 195 HOH HOH . O 4 HOH C 37 3262 203 HOH HOH . O 4 HOH C 38 3263 204 HOH HOH . O 4 HOH C 39 3264 225 HOH HOH . O 4 HOH C 40 3265 230 HOH HOH . O 4 HOH C 41 3266 234 HOH HOH . O 4 HOH C 42 3267 247 HOH HOH . O 4 HOH C 43 3268 251 HOH HOH . O 4 HOH C 44 3269 284 HOH HOH . O 4 HOH C 45 3270 295 HOH HOH . O 4 HOH C 46 3271 310 HOH HOH . O 4 HOH C 47 3272 322 HOH HOH . O 4 HOH C 48 3273 334 HOH HOH . O 4 HOH C 49 3274 378 HOH HOH . O 4 HOH C 50 3275 409 HOH HOH . O 4 HOH C 51 3276 411 HOH HOH . O 4 HOH C 52 3277 424 HOH HOH . O 4 HOH C 53 3278 471 HOH HOH . P 4 HOH D 1 4226 3 HOH HOH . P 4 HOH D 2 4227 4 HOH HOH . P 4 HOH D 3 4228 5 HOH HOH . P 4 HOH D 4 4229 8 HOH HOH . P 4 HOH D 5 4230 15 HOH HOH . P 4 HOH D 6 4231 23 HOH HOH . P 4 HOH D 7 4232 28 HOH HOH . P 4 HOH D 8 4233 31 HOH HOH . P 4 HOH D 9 4234 32 HOH HOH . P 4 HOH D 10 4235 34 HOH HOH . P 4 HOH D 11 4236 36 HOH HOH . P 4 HOH D 12 4237 47 HOH HOH . P 4 HOH D 13 4238 49 HOH HOH . P 4 HOH D 14 4239 52 HOH HOH . P 4 HOH D 15 4240 53 HOH HOH . P 4 HOH D 16 4241 58 HOH HOH . P 4 HOH D 17 4242 70 HOH HOH . P 4 HOH D 18 4243 75 HOH HOH . P 4 HOH D 19 4244 79 HOH HOH . P 4 HOH D 20 4245 82 HOH HOH . P 4 HOH D 21 4246 95 HOH HOH . P 4 HOH D 22 4247 107 HOH HOH . P 4 HOH D 23 4248 108 HOH HOH . P 4 HOH D 24 4249 117 HOH HOH . P 4 HOH D 25 4250 121 HOH HOH . P 4 HOH D 26 4251 125 HOH HOH . P 4 HOH D 27 4252 134 HOH HOH . P 4 HOH D 28 4253 144 HOH HOH . P 4 HOH D 29 4254 148 HOH HOH . P 4 HOH D 30 4255 168 HOH HOH . P 4 HOH D 31 4256 175 HOH HOH . P 4 HOH D 32 4257 176 HOH HOH . P 4 HOH D 33 4258 190 HOH HOH . P 4 HOH D 34 4259 212 HOH HOH . P 4 HOH D 35 4260 217 HOH HOH . P 4 HOH D 36 4261 220 HOH HOH . P 4 HOH D 37 4262 223 HOH HOH . P 4 HOH D 38 4263 232 HOH HOH . P 4 HOH D 39 4264 233 HOH HOH . P 4 HOH D 40 4265 256 HOH HOH . P 4 HOH D 41 4266 265 HOH HOH . P 4 HOH D 42 4267 335 HOH HOH . P 4 HOH D 43 4268 368 HOH HOH . P 4 HOH D 44 4269 376 HOH HOH . P 4 HOH D 45 4270 395 HOH HOH . P 4 HOH D 46 4271 400 HOH HOH . P 4 HOH D 47 4272 412 HOH HOH . P 4 HOH D 48 4273 423 HOH HOH . P 4 HOH D 49 4274 438 HOH HOH . P 4 HOH D 50 4275 444 HOH HOH . P 4 HOH D 51 4276 461 HOH HOH . P 4 HOH D 52 4277 484 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CB3 HPX . . . F 3 37.954 14.325 -16.415 0.5 39.45 ? CB3 HPX 1225 A 1 HETATM 2 C CB4 HPX . . . F 3 36.823 14.116 -17.2 0.5 40.28 ? CB4 HPX 1225 A 1 HETATM 3 C CB5 HPX . . . F 3 35.715 13.454 -16.665 0.5 40.07 ? CB5 HPX 1225 A 1 HETATM 4 C CB6 HPX . . . F 3 35.746 13.013 -15.345 0.5 39.39 ? CB6 HPX 1225 A 1 HETATM 5 C CB1 HPX . . . F 3 36.873 13.223 -14.562 0.5 39.3 ? CB1 HPX 1225 A 1 HETATM 6 C CB2 HPX . . . F 3 37.978 13.878 -15.098 0.5 39.03 ? CB2 HPX 1225 A 1 HETATM 7 C CA6 HPX . . . F 3 36.916 12.738 -13.145 0.5 39.54 ? CA6 HPX 1225 A 1 HETATM 8 O OA4 HPX . . . F 3 38.001 12.547 -12.615 0.5 40.3 ? OA4 HPX 1225 A 1 HETATM 9 C CA5 HPX . . . F 3 35.684 12.478 -12.379 0.5 39.08 ? CA5 HPX 1225 A 1 HETATM 10 C CA4 HPX . . . F 3 35.663 11.398 -11.608 0.5 39.47 ? CA4 HPX 1225 A 1 HETATM 11 C CA3 HPX . . . F 3 34.491 11.056 -10.788 0.5 39.91 ? CA3 HPX 1225 A 1 HETATM 12 C CA2 HPX . . . F 3 34.575 10.167 -9.79 0.5 40.22 ? CA2 HPX 1225 A 1 HETATM 13 O OA3 HPX . . . F 3 35.692 9.521 -9.476 0.5 40.23 ? OA3 HPX 1225 A 1 HETATM 14 C CA1 HPX . . . F 3 33.395 9.889 -9.009 0.5 40.46 ? CA1 HPX 1225 A 1 HETATM 15 O OA2 HPX . . . F 3 33.516 9.238 -7.949 0.5 41.41 ? OA2 HPX 1225 A 1 HETATM 16 O OA1 HPX . . . F 3 32.305 10.324 -9.425 0.5 40.9 ? OA1 HPX 1225 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #