data_2DT9 # _model_server_result.job_id JM7lJOnv6w5ss8nI01Cspw _model_server_result.datetime_utc '2024-11-18 08:42:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dt9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":401}' # _entry.id 2DT9 # _exptl.entry_id 2DT9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 119.119 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description THREONINE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2DT9 _cell.length_a 141.773 _cell.length_b 141.773 _cell.length_c 141.773 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DT9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C4 H9 N O3' _chem_comp.formula_weight 119.119 _chem_comp.id THR _chem_comp.mon_nstd_flag y _chem_comp.name THREONINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA THR sing 283 n n N H THR sing 284 n n N H2 THR sing 285 n n CA C THR sing 286 n n CA CB THR sing 287 n n CA HA THR sing 288 n n C O THR doub 289 n n C OXT THR sing 290 n n CB OG1 THR sing 291 n n CB CG2 THR sing 292 n n CB HB THR sing 293 n n OG1 HG1 THR sing 294 n n CG2 HG21 THR sing 295 n n CG2 HG22 THR sing 296 n n CG2 HG23 THR sing 297 n n OXT HXT THR sing 298 n n # _atom_sites.entry_id 2DT9 _atom_sites.fract_transf_matrix[1][1] 0.007054 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007054 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ACT A 1 502 502 ACT ACT . D 2 ACT B 1 501 501 ACT ACT . E 3 THR B 1 401 401 THR THN . F 3 THR B 1 402 402 THR THN . G 4 HOH A 1 503 2 HOH HOH . G 4 HOH A 2 504 7 HOH HOH . G 4 HOH A 3 505 10 HOH HOH . G 4 HOH A 4 506 12 HOH HOH . G 4 HOH A 5 507 14 HOH HOH . G 4 HOH A 6 508 15 HOH HOH . G 4 HOH A 7 509 16 HOH HOH . G 4 HOH A 8 510 18 HOH HOH . G 4 HOH A 9 511 21 HOH HOH . G 4 HOH A 10 512 22 HOH HOH . G 4 HOH A 11 513 23 HOH HOH . G 4 HOH A 12 514 25 HOH HOH . G 4 HOH A 13 515 29 HOH HOH . G 4 HOH A 14 516 30 HOH HOH . G 4 HOH A 15 517 32 HOH HOH . G 4 HOH A 16 518 33 HOH HOH . G 4 HOH A 17 519 34 HOH HOH . G 4 HOH A 18 520 35 HOH HOH . G 4 HOH A 19 521 36 HOH HOH . G 4 HOH A 20 522 38 HOH HOH . G 4 HOH A 21 523 39 HOH HOH . G 4 HOH A 22 524 41 HOH HOH . G 4 HOH A 23 525 49 HOH HOH . G 4 HOH A 24 526 50 HOH HOH . G 4 HOH A 25 527 51 HOH HOH . G 4 HOH A 26 528 52 HOH HOH . G 4 HOH A 27 529 56 HOH HOH . G 4 HOH A 28 530 61 HOH HOH . G 4 HOH A 29 531 63 HOH HOH . G 4 HOH A 30 532 68 HOH HOH . G 4 HOH A 31 533 69 HOH HOH . G 4 HOH A 32 534 72 HOH HOH . G 4 HOH A 33 535 73 HOH HOH . G 4 HOH A 34 536 75 HOH HOH . G 4 HOH A 35 537 76 HOH HOH . G 4 HOH A 36 538 78 HOH HOH . G 4 HOH A 37 539 79 HOH HOH . G 4 HOH A 38 540 80 HOH HOH . G 4 HOH A 39 541 82 HOH HOH . G 4 HOH A 40 542 85 HOH HOH . G 4 HOH A 41 543 86 HOH HOH . G 4 HOH A 42 544 88 HOH HOH . G 4 HOH A 43 545 93 HOH HOH . G 4 HOH A 44 546 95 HOH HOH . G 4 HOH A 45 547 98 HOH HOH . G 4 HOH A 46 548 101 HOH HOH . G 4 HOH A 47 549 103 HOH HOH . G 4 HOH A 48 550 104 HOH HOH . G 4 HOH A 49 551 105 HOH HOH . G 4 HOH A 50 552 111 HOH HOH . G 4 HOH A 51 553 112 HOH HOH . G 4 HOH A 52 554 113 HOH HOH . G 4 HOH A 53 555 115 HOH HOH . G 4 HOH A 54 556 116 HOH HOH . G 4 HOH A 55 557 117 HOH HOH . G 4 HOH A 56 558 118 HOH HOH . G 4 HOH A 57 559 120 HOH HOH . G 4 HOH A 58 560 121 HOH HOH . G 4 HOH A 59 561 126 HOH HOH . G 4 HOH A 60 562 128 HOH HOH . G 4 HOH A 61 563 130 HOH HOH . G 4 HOH A 62 564 134 HOH HOH . G 4 HOH A 63 565 135 HOH HOH . G 4 HOH A 64 566 137 HOH HOH . G 4 HOH A 65 567 141 HOH HOH . G 4 HOH A 66 568 143 HOH HOH . G 4 HOH A 67 569 147 HOH HOH . G 4 HOH A 68 570 148 HOH HOH . G 4 HOH A 69 571 150 HOH HOH . H 4 HOH B 1 502 1 HOH HOH . H 4 HOH B 2 503 3 HOH HOH . H 4 HOH B 3 504 4 HOH HOH . H 4 HOH B 4 505 5 HOH HOH . H 4 HOH B 5 506 6 HOH HOH . H 4 HOH B 6 507 8 HOH HOH . H 4 HOH B 7 508 9 HOH HOH . H 4 HOH B 8 509 11 HOH HOH . H 4 HOH B 9 510 13 HOH HOH . H 4 HOH B 10 511 17 HOH HOH . H 4 HOH B 11 512 19 HOH HOH . H 4 HOH B 12 513 20 HOH HOH . H 4 HOH B 13 514 24 HOH HOH . H 4 HOH B 14 515 26 HOH HOH . H 4 HOH B 15 516 27 HOH HOH . H 4 HOH B 16 517 28 HOH HOH . H 4 HOH B 17 518 31 HOH HOH . H 4 HOH B 18 519 37 HOH HOH . H 4 HOH B 19 520 40 HOH HOH . H 4 HOH B 20 521 42 HOH HOH . H 4 HOH B 21 522 43 HOH HOH . H 4 HOH B 22 523 44 HOH HOH . H 4 HOH B 23 524 45 HOH HOH . H 4 HOH B 24 525 46 HOH HOH . H 4 HOH B 25 526 47 HOH HOH . H 4 HOH B 26 527 48 HOH HOH . H 4 HOH B 27 528 53 HOH HOH . H 4 HOH B 28 529 54 HOH HOH . H 4 HOH B 29 530 55 HOH HOH . H 4 HOH B 30 531 57 HOH HOH . H 4 HOH B 31 532 58 HOH HOH . H 4 HOH B 32 533 59 HOH HOH . H 4 HOH B 33 534 60 HOH HOH . H 4 HOH B 34 535 62 HOH HOH . H 4 HOH B 35 536 64 HOH HOH . H 4 HOH B 36 537 65 HOH HOH . H 4 HOH B 37 538 66 HOH HOH . H 4 HOH B 38 539 67 HOH HOH . H 4 HOH B 39 540 70 HOH HOH . H 4 HOH B 40 541 71 HOH HOH . H 4 HOH B 41 542 74 HOH HOH . H 4 HOH B 42 543 77 HOH HOH . H 4 HOH B 43 544 81 HOH HOH . H 4 HOH B 44 545 83 HOH HOH . H 4 HOH B 45 546 84 HOH HOH . H 4 HOH B 46 547 87 HOH HOH . H 4 HOH B 47 548 89 HOH HOH . H 4 HOH B 48 549 90 HOH HOH . H 4 HOH B 49 550 91 HOH HOH . H 4 HOH B 50 551 92 HOH HOH . H 4 HOH B 51 552 94 HOH HOH . H 4 HOH B 52 553 96 HOH HOH . H 4 HOH B 53 554 97 HOH HOH . H 4 HOH B 54 555 99 HOH HOH . H 4 HOH B 55 556 100 HOH HOH . H 4 HOH B 56 557 102 HOH HOH . H 4 HOH B 57 558 106 HOH HOH . H 4 HOH B 58 559 107 HOH HOH . H 4 HOH B 59 560 108 HOH HOH . H 4 HOH B 60 561 109 HOH HOH . H 4 HOH B 61 562 110 HOH HOH . H 4 HOH B 62 563 114 HOH HOH . H 4 HOH B 63 564 119 HOH HOH . H 4 HOH B 64 565 122 HOH HOH . H 4 HOH B 65 566 123 HOH HOH . H 4 HOH B 66 567 124 HOH HOH . H 4 HOH B 67 568 125 HOH HOH . H 4 HOH B 68 569 127 HOH HOH . H 4 HOH B 69 570 129 HOH HOH . H 4 HOH B 70 571 131 HOH HOH . H 4 HOH B 71 572 132 HOH HOH . H 4 HOH B 72 573 133 HOH HOH . H 4 HOH B 73 574 136 HOH HOH . H 4 HOH B 74 575 138 HOH HOH . H 4 HOH B 75 576 139 HOH HOH . H 4 HOH B 76 577 140 HOH HOH . H 4 HOH B 77 578 142 HOH HOH . H 4 HOH B 78 579 144 HOH HOH . H 4 HOH B 79 580 145 HOH HOH . H 4 HOH B 80 581 146 HOH HOH . H 4 HOH B 81 582 149 HOH HOH . H 4 HOH B 82 583 151 HOH HOH . H 4 HOH B 83 584 152 HOH HOH . H 4 HOH B 84 585 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N THR . . . E 3 -5.019 22.237 -44.82 1 15.37 ? N THR 401 B 1 HETATM 2 C CA THR . . . E 3 -6.179 21.878 -43.96 1 18.61 ? CA THR 401 B 1 HETATM 3 C C THR . . . E 3 -7.173 23.035 -43.929 1 21.93 ? C THR 401 B 1 HETATM 4 O O THR . . . E 3 -8.195 22.936 -43.211 1 16.88 ? O THR 401 B 1 HETATM 5 C CB THR . . . E 3 -5.714 21.555 -42.513 1 20.42 ? CB THR 401 B 1 HETATM 6 O OG1 THR . . . E 3 -4.969 22.658 -41.982 1 16.25 ? OG1 THR 401 B 1 HETATM 7 C CG2 THR . . . E 3 -4.819 20.32 -42.505 1 22.55 ? CG2 THR 401 B 1 HETATM 8 O OXT THR . . . E 3 -6.908 24.033 -44.635 1 19.92 ? OXT THR 401 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #