data_2DWR # _model_server_result.job_id 9qBT3YlJBvptgVCqcZ10Jw _model_server_result.datetime_utc '2024-12-18 16:18:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dwr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":4001}' # _entry.id 2DWR # _exptl.entry_id 2DWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2DWR _cell.length_a 74.762 _cell.length_b 74.762 _cell.length_c 70.09 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 2DWR _atom_sites.fract_transf_matrix[1][1] 0.013376 _atom_sites.fract_transf_matrix[1][2] 0.007722 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015445 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014267 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 4000 4000 GOL GOL . C 2 GOL A 1 4001 4000 GOL GOL . D 3 IPA A 1 5000 5000 IPA IOH . E 3 IPA A 1 5001 5000 IPA IOH . F 4 HOH A 1 5002 1 HOH HOH . F 4 HOH A 2 5003 2 HOH HOH . F 4 HOH A 3 5004 3 HOH HOH . F 4 HOH A 4 5005 4 HOH HOH . F 4 HOH A 5 5006 5 HOH HOH . F 4 HOH A 6 5007 6 HOH HOH . F 4 HOH A 7 5008 7 HOH HOH . F 4 HOH A 8 5009 8 HOH HOH . F 4 HOH A 9 5010 9 HOH HOH . F 4 HOH A 10 5011 10 HOH HOH . F 4 HOH A 11 5012 11 HOH HOH . F 4 HOH A 12 5013 12 HOH HOH . F 4 HOH A 13 5014 13 HOH HOH . F 4 HOH A 14 5015 14 HOH HOH . F 4 HOH A 15 5016 15 HOH HOH . F 4 HOH A 16 5017 16 HOH HOH . F 4 HOH A 17 5018 17 HOH HOH . F 4 HOH A 18 5019 18 HOH HOH . F 4 HOH A 19 5020 19 HOH HOH . F 4 HOH A 20 5021 20 HOH HOH . F 4 HOH A 21 5022 21 HOH HOH . F 4 HOH A 22 5023 22 HOH HOH . F 4 HOH A 23 5024 23 HOH HOH . F 4 HOH A 24 5025 24 HOH HOH . F 4 HOH A 25 5026 25 HOH HOH . F 4 HOH A 26 5027 26 HOH HOH . F 4 HOH A 27 5028 27 HOH HOH . F 4 HOH A 28 5029 28 HOH HOH . F 4 HOH A 29 5030 29 HOH HOH . F 4 HOH A 30 5031 30 HOH HOH . F 4 HOH A 31 5032 31 HOH HOH . F 4 HOH A 32 5033 32 HOH HOH . F 4 HOH A 33 5034 33 HOH HOH . F 4 HOH A 34 5035 34 HOH HOH . F 4 HOH A 35 5036 35 HOH HOH . F 4 HOH A 36 5037 36 HOH HOH . F 4 HOH A 37 5038 37 HOH HOH . F 4 HOH A 38 5039 38 HOH HOH . F 4 HOH A 39 5040 39 HOH HOH . F 4 HOH A 40 5041 40 HOH HOH . F 4 HOH A 41 5042 41 HOH HOH . F 4 HOH A 42 5043 42 HOH HOH . F 4 HOH A 43 5044 43 HOH HOH . F 4 HOH A 44 5045 44 HOH HOH . F 4 HOH A 45 5046 45 HOH HOH . F 4 HOH A 46 5047 46 HOH HOH . F 4 HOH A 47 5048 47 HOH HOH . F 4 HOH A 48 5049 48 HOH HOH . F 4 HOH A 49 5050 49 HOH HOH . F 4 HOH A 50 5051 50 HOH HOH . F 4 HOH A 51 5052 51 HOH HOH . F 4 HOH A 52 5053 52 HOH HOH . F 4 HOH A 53 5054 53 HOH HOH . F 4 HOH A 54 5055 54 HOH HOH . F 4 HOH A 55 5056 55 HOH HOH . F 4 HOH A 56 5057 56 HOH HOH . F 4 HOH A 57 5058 57 HOH HOH . F 4 HOH A 58 5059 58 HOH HOH . F 4 HOH A 59 5060 59 HOH HOH . F 4 HOH A 60 5061 60 HOH HOH . F 4 HOH A 61 5062 61 HOH HOH . F 4 HOH A 62 5063 62 HOH HOH . F 4 HOH A 63 5064 63 HOH HOH . F 4 HOH A 64 5065 64 HOH HOH . F 4 HOH A 65 5066 65 HOH HOH . F 4 HOH A 66 5067 66 HOH HOH . F 4 HOH A 67 5068 67 HOH HOH . F 4 HOH A 68 5069 68 HOH HOH . F 4 HOH A 69 5070 69 HOH HOH . F 4 HOH A 70 5071 70 HOH HOH . F 4 HOH A 71 5072 71 HOH HOH . F 4 HOH A 72 5073 72 HOH HOH . F 4 HOH A 73 5074 73 HOH HOH . F 4 HOH A 74 5075 74 HOH HOH . F 4 HOH A 75 5076 75 HOH HOH . F 4 HOH A 76 5077 76 HOH HOH . F 4 HOH A 77 5078 77 HOH HOH . F 4 HOH A 78 5079 78 HOH HOH . F 4 HOH A 79 5080 79 HOH HOH . F 4 HOH A 80 5081 80 HOH HOH . F 4 HOH A 81 5082 81 HOH HOH . F 4 HOH A 82 5083 82 HOH HOH . F 4 HOH A 83 5084 83 HOH HOH . F 4 HOH A 84 5085 84 HOH HOH . F 4 HOH A 85 5086 85 HOH HOH . F 4 HOH A 86 5087 86 HOH HOH . F 4 HOH A 87 5088 87 HOH HOH . F 4 HOH A 88 5089 88 HOH HOH . F 4 HOH A 89 5090 89 HOH HOH . F 4 HOH A 90 5091 90 HOH HOH . F 4 HOH A 91 5092 91 HOH HOH . F 4 HOH A 92 5093 92 HOH HOH . F 4 HOH A 93 5094 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 1.339 45.231 18.212 1 39.34 ? C1 GOL 4001 A 1 HETATM 2 O O1 GOL . . . C 2 1.782 44.076 17.544 1 35.86 ? O1 GOL 4001 A 1 HETATM 3 C C2 GOL . . . C 2 0.631 44.861 19.518 1 41.26 ? C2 GOL 4001 A 1 HETATM 4 O O2 GOL . . . C 2 0.474 43.461 19.628 1 41.68 ? O2 GOL 4001 A 1 HETATM 5 C C3 GOL . . . C 2 -0.738 45.538 19.604 1 42.01 ? C3 GOL 4001 A 1 HETATM 6 O O3 GOL . . . C 2 -0.626 46.933 19.423 1 43.55 ? O3 GOL 4001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 361 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #