data_2DX0 # _model_server_result.job_id fVJrPa9piaOxwsYSHmzEaQ _model_server_result.datetime_utc '2024-11-12 20:41:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2dx0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 2DX0 # _exptl.entry_id 2DX0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2DX0 _cell.length_a 80.905 _cell.length_b 80.905 _cell.length_c 133.734 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2DX0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G 1 1 A,C,D,F 2 1 B,E,G 2 2 A,C,D,F 3 1,3 B,E,G 3 4,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 x+1/2,-y+1/2,-z+3/4 1 0 0 0 -1 0 0 0 -1 40.4525 40.4525 100.3005 3 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 80.905 80.905 66.867 4 'crystal symmetry operation' 4_554 y+1/2,-x+1/2,z-1/4 0 1 0 -1 0 0 0 0 1 40.4525 40.4525 -33.4335 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 78 A CYS 586 1_555 A SG CYS 116 A CYS 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 B SG CYS 78 B CYS 586 1_555 B SG CYS 116 B CYS 624 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 2DX0 _atom_sites.fract_transf_matrix[1][1] 0.01236 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01236 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007478 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 1001 1001 SO4 SO4 . D 2 SO4 A 1 1002 1002 SO4 SO4 . E 2 SO4 B 1 1003 1003 SO4 SO4 . F 3 HOH A 1 1 1 HOH HOH . F 3 HOH A 2 2 2 HOH HOH . F 3 HOH A 3 3 3 HOH HOH . F 3 HOH A 4 4 4 HOH HOH . F 3 HOH A 5 5 5 HOH HOH . F 3 HOH A 6 6 6 HOH HOH . F 3 HOH A 7 7 7 HOH HOH . F 3 HOH A 8 8 8 HOH HOH . F 3 HOH A 9 9 9 HOH HOH . F 3 HOH A 10 10 10 HOH HOH . F 3 HOH A 11 11 11 HOH HOH . F 3 HOH A 12 16 16 HOH HOH . F 3 HOH A 13 17 17 HOH HOH . F 3 HOH A 14 18 18 HOH HOH . F 3 HOH A 15 19 19 HOH HOH . F 3 HOH A 16 22 22 HOH HOH . F 3 HOH A 17 24 24 HOH HOH . F 3 HOH A 18 36 36 HOH HOH . F 3 HOH A 19 40 40 HOH HOH . F 3 HOH A 20 41 41 HOH HOH . F 3 HOH A 21 42 42 HOH HOH . F 3 HOH A 22 43 43 HOH HOH . F 3 HOH A 23 44 44 HOH HOH . F 3 HOH A 24 45 45 HOH HOH . F 3 HOH A 25 48 48 HOH HOH . F 3 HOH A 26 49 49 HOH HOH . F 3 HOH A 27 50 50 HOH HOH . F 3 HOH A 28 51 51 HOH HOH . F 3 HOH A 29 52 52 HOH HOH . F 3 HOH A 30 54 54 HOH HOH . F 3 HOH A 31 56 56 HOH HOH . F 3 HOH A 32 57 57 HOH HOH . F 3 HOH A 33 58 58 HOH HOH . F 3 HOH A 34 59 59 HOH HOH . F 3 HOH A 35 60 60 HOH HOH . F 3 HOH A 36 62 62 HOH HOH . F 3 HOH A 37 63 63 HOH HOH . F 3 HOH A 38 64 64 HOH HOH . F 3 HOH A 39 66 66 HOH HOH . F 3 HOH A 40 69 69 HOH HOH . F 3 HOH A 41 70 70 HOH HOH . F 3 HOH A 42 71 71 HOH HOH . F 3 HOH A 43 73 73 HOH HOH . F 3 HOH A 44 74 74 HOH HOH . F 3 HOH A 45 75 75 HOH HOH . F 3 HOH A 46 76 76 HOH HOH . F 3 HOH A 47 77 77 HOH HOH . F 3 HOH A 48 78 78 HOH HOH . F 3 HOH A 49 79 79 HOH HOH . F 3 HOH A 50 80 80 HOH HOH . F 3 HOH A 51 81 81 HOH HOH . F 3 HOH A 52 82 82 HOH HOH . F 3 HOH A 53 83 83 HOH HOH . F 3 HOH A 54 85 85 HOH HOH . F 3 HOH A 55 86 86 HOH HOH . F 3 HOH A 56 87 87 HOH HOH . F 3 HOH A 57 88 88 HOH HOH . F 3 HOH A 58 89 89 HOH HOH . F 3 HOH A 59 90 90 HOH HOH . F 3 HOH A 60 91 91 HOH HOH . F 3 HOH A 61 92 92 HOH HOH . F 3 HOH A 62 97 97 HOH HOH . G 3 HOH B 1 12 12 HOH HOH . G 3 HOH B 2 13 13 HOH HOH . G 3 HOH B 3 14 14 HOH HOH . G 3 HOH B 4 15 15 HOH HOH . G 3 HOH B 5 20 20 HOH HOH . G 3 HOH B 6 23 23 HOH HOH . G 3 HOH B 7 25 25 HOH HOH . G 3 HOH B 8 26 26 HOH HOH . G 3 HOH B 9 27 27 HOH HOH . G 3 HOH B 10 28 28 HOH HOH . G 3 HOH B 11 29 29 HOH HOH . G 3 HOH B 12 30 30 HOH HOH . G 3 HOH B 13 31 31 HOH HOH . G 3 HOH B 14 32 32 HOH HOH . G 3 HOH B 15 33 33 HOH HOH . G 3 HOH B 16 34 34 HOH HOH . G 3 HOH B 17 35 35 HOH HOH . G 3 HOH B 18 37 37 HOH HOH . G 3 HOH B 19 38 38 HOH HOH . G 3 HOH B 20 39 39 HOH HOH . G 3 HOH B 21 46 46 HOH HOH . G 3 HOH B 22 47 47 HOH HOH . G 3 HOH B 23 53 53 HOH HOH . G 3 HOH B 24 55 55 HOH HOH . G 3 HOH B 25 61 61 HOH HOH . G 3 HOH B 26 65 65 HOH HOH . G 3 HOH B 27 67 67 HOH HOH . G 3 HOH B 28 68 68 HOH HOH . G 3 HOH B 29 72 72 HOH HOH . G 3 HOH B 30 84 84 HOH HOH . G 3 HOH B 31 93 93 HOH HOH . G 3 HOH B 32 94 94 HOH HOH . G 3 HOH B 33 95 95 HOH HOH . G 3 HOH B 34 96 96 HOH HOH . G 3 HOH B 35 98 98 HOH HOH . G 3 HOH B 36 99 99 HOH HOH . G 3 HOH B 37 100 100 HOH HOH . G 3 HOH B 38 101 101 HOH HOH . G 3 HOH B 39 102 102 HOH HOH . G 3 HOH B 40 103 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 53.875 9.282 47.331 1 25.46 ? S SO4 1002 A 1 HETATM 2 O O1 SO4 . . . D 2 53.898 10.512 46.522 1 26.18 ? O1 SO4 1002 A 1 HETATM 3 O O2 SO4 . . . D 2 52.648 9.256 48.134 1 25.83 ? O2 SO4 1002 A 1 HETATM 4 O O3 SO4 . . . D 2 53.905 8.096 46.447 1 27.06 ? O3 SO4 1002 A 1 HETATM 5 O O4 SO4 . . . D 2 55.041 9.264 48.218 1 25.69 ? O4 SO4 1002 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 260 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #