data_2E0I
#
_model_server_result.job_id            Q4xkLh-7TD-Gp2bpCLZeEw 
_model_server_result.datetime_utc      '2025-04-26 00:44:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2e0i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":3003}' 
#
_entry.id    2E0I 
#
_exptl.entry_id    2E0I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          91.49 
_cell.angle_gamma         90 
_cell.entry_id            2E0I 
_cell.length_a            79.875 
_cell.length_b            114.715 
_cell.length_c            167.684 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2E0I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,S 1 1 
B,I,J,K,T 2 1 
C,L,M,N,O,U 3 1 
D,P,Q,R,V 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 K N N 
? 3 N N N 
? 3 O N N 
? 3 R N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 26 A CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf2 B SG CYS 3 B CYS 3 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf3 C SG CYS 3 C CYS 3 1_555 C SG CYS 26 C CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf4 D SG CYS 3 D CYS 3 1_555 D SG CYS 26 D CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 328 n n 
C1 H11 MPD sing 329 n n 
C1 H12 MPD sing 330 n n 
C1 H13 MPD sing 331 n n 
C2 O2 MPD sing 332 n n 
C2 CM MPD sing 333 n n 
C2 C3 MPD sing 334 n n 
O2 HO2 MPD sing 335 n n 
CM HM1 MPD sing 336 n n 
CM HM2 MPD sing 337 n n 
CM HM3 MPD sing 338 n n 
C3 C4 MPD sing 339 n n 
C3 H31 MPD sing 340 n n 
C3 H32 MPD sing 341 n n 
C4 O4 MPD sing 342 n n 
C4 C5 MPD sing 343 n n 
C4 H4 MPD sing 344 n n 
O4 HO4 MPD sing 345 n n 
C5 H51 MPD sing 346 n n 
C5 H52 MPD sing 347 n n 
C5 H53 MPD sing 348 n n 
#
_atom_sites.entry_id                     2E0I 
_atom_sites.fract_transf_matrix[1][1]    0.01252 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000325 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008717 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005966 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FAD A 1 1100 1100 FAD FAD . 
F 2 FAD A 1 1200 1200 FAD FAD . 
G 3 MPD A 1 3001 3001 MPD MPD . 
H 3 MPD A 1 3005 3005 MPD MPD . 
I 2 FAD B 1 1300 1300 FAD FAD . 
J 2 FAD B 1 1400 1400 FAD FAD . 
K 3 MPD B 1 3002 3002 MPD MPD . 
L 2 FAD C 1 1500 1500 FAD FAD . 
M 2 FAD C 1 1600 1600 FAD FAD . 
N 3 MPD C 1 3003 3003 MPD MPD . 
O 3 MPD C 1 3006 3006 MPD MPD . 
P 2 FAD D 1 1700 1700 FAD FAD . 
Q 2 FAD D 1 1800 1800 FAD FAD . 
R 3 MPD D 1 3004 3004 MPD MPD . 
S 4 HOH A 1 5002 5002 HOH WAT . 
S 4 HOH A 2 5003 5003 HOH WAT . 
S 4 HOH A 3 5007 5007 HOH WAT . 
S 4 HOH A 4 5010 5010 HOH WAT . 
S 4 HOH A 5 5013 5013 HOH WAT . 
S 4 HOH A 6 5017 5017 HOH WAT . 
S 4 HOH A 7 5022 5022 HOH WAT . 
S 4 HOH A 8 5027 5027 HOH WAT . 
S 4 HOH A 9 5031 5031 HOH WAT . 
S 4 HOH A 10 5044 5044 HOH WAT . 
S 4 HOH A 11 5045 5045 HOH WAT . 
S 4 HOH A 12 5051 5051 HOH WAT . 
S 4 HOH A 13 5053 5053 HOH WAT . 
S 4 HOH A 14 5058 5058 HOH WAT . 
S 4 HOH A 15 5067 5067 HOH WAT . 
S 4 HOH A 16 5073 5073 HOH WAT . 
S 4 HOH A 17 5078 5078 HOH WAT . 
S 4 HOH A 18 5079 5079 HOH WAT . 
S 4 HOH A 19 5082 5082 HOH WAT . 
S 4 HOH A 20 5087 5087 HOH WAT . 
S 4 HOH A 21 5093 5093 HOH WAT . 
S 4 HOH A 22 5100 5100 HOH WAT . 
S 4 HOH A 23 5101 5101 HOH WAT . 
S 4 HOH A 24 5108 5108 HOH WAT . 
S 4 HOH A 25 5114 5114 HOH WAT . 
S 4 HOH A 26 5120 5120 HOH WAT . 
S 4 HOH A 27 5121 5121 HOH WAT . 
S 4 HOH A 28 5123 5123 HOH WAT . 
S 4 HOH A 29 5124 5124 HOH WAT . 
S 4 HOH A 30 5125 5125 HOH WAT . 
S 4 HOH A 31 5127 5127 HOH WAT . 
S 4 HOH A 32 5129 5129 HOH WAT . 
S 4 HOH A 33 5136 5136 HOH WAT . 
S 4 HOH A 34 5137 5137 HOH WAT . 
S 4 HOH A 35 5139 5139 HOH WAT . 
S 4 HOH A 36 5155 5155 HOH WAT . 
S 4 HOH A 37 5164 5164 HOH WAT . 
S 4 HOH A 38 5165 5165 HOH WAT . 
S 4 HOH A 39 5166 5166 HOH WAT . 
S 4 HOH A 40 5168 5168 HOH WAT . 
S 4 HOH A 41 5169 5169 HOH WAT . 
T 4 HOH B 1 5004 5004 HOH WAT . 
T 4 HOH B 2 5005 5005 HOH WAT . 
T 4 HOH B 3 5009 5009 HOH WAT . 
T 4 HOH B 4 5012 5012 HOH WAT . 
T 4 HOH B 5 5014 5014 HOH WAT . 
T 4 HOH B 6 5026 5026 HOH WAT . 
T 4 HOH B 7 5029 5029 HOH WAT . 
T 4 HOH B 8 5034 5034 HOH WAT . 
T 4 HOH B 9 5035 5035 HOH WAT . 
T 4 HOH B 10 5037 5037 HOH WAT . 
T 4 HOH B 11 5038 5038 HOH WAT . 
T 4 HOH B 12 5040 5040 HOH WAT . 
T 4 HOH B 13 5055 5055 HOH WAT . 
T 4 HOH B 14 5056 5056 HOH WAT . 
T 4 HOH B 15 5057 5057 HOH WAT . 
T 4 HOH B 16 5068 5068 HOH WAT . 
T 4 HOH B 17 5071 5071 HOH WAT . 
T 4 HOH B 18 5072 5072 HOH WAT . 
T 4 HOH B 19 5077 5077 HOH WAT . 
T 4 HOH B 20 5086 5086 HOH WAT . 
T 4 HOH B 21 5089 5089 HOH WAT . 
T 4 HOH B 22 5090 5090 HOH WAT . 
T 4 HOH B 23 5110 5110 HOH WAT . 
T 4 HOH B 24 5115 5115 HOH WAT . 
T 4 HOH B 25 5118 5118 HOH WAT . 
T 4 HOH B 26 5119 5119 HOH WAT . 
T 4 HOH B 27 5126 5126 HOH WAT . 
T 4 HOH B 28 5141 5141 HOH WAT . 
T 4 HOH B 29 5142 5142 HOH WAT . 
T 4 HOH B 30 5144 5144 HOH WAT . 
T 4 HOH B 31 5145 5145 HOH WAT . 
T 4 HOH B 32 5146 5146 HOH WAT . 
T 4 HOH B 33 5147 5147 HOH WAT . 
T 4 HOH B 34 5149 5149 HOH WAT . 
T 4 HOH B 35 5150 5150 HOH WAT . 
T 4 HOH B 36 5153 5153 HOH WAT . 
T 4 HOH B 37 5154 5154 HOH WAT . 
T 4 HOH B 38 5156 5156 HOH WAT . 
U 4 HOH C 1 5001 5001 HOH WAT . 
U 4 HOH C 2 5015 5015 HOH WAT . 
U 4 HOH C 3 5018 5018 HOH WAT . 
U 4 HOH C 4 5021 5021 HOH WAT . 
U 4 HOH C 5 5028 5028 HOH WAT . 
U 4 HOH C 6 5032 5032 HOH WAT . 
U 4 HOH C 7 5039 5039 HOH WAT . 
U 4 HOH C 8 5042 5042 HOH WAT . 
U 4 HOH C 9 5043 5043 HOH WAT . 
U 4 HOH C 10 5046 5046 HOH WAT . 
U 4 HOH C 11 5047 5047 HOH WAT . 
U 4 HOH C 12 5048 5048 HOH WAT . 
U 4 HOH C 13 5049 5049 HOH WAT . 
U 4 HOH C 14 5050 5050 HOH WAT . 
U 4 HOH C 15 5059 5059 HOH WAT . 
U 4 HOH C 16 5060 5060 HOH WAT . 
U 4 HOH C 17 5061 5061 HOH WAT . 
U 4 HOH C 18 5063 5063 HOH WAT . 
U 4 HOH C 19 5065 5065 HOH WAT . 
U 4 HOH C 20 5066 5066 HOH WAT . 
U 4 HOH C 21 5069 5069 HOH WAT . 
U 4 HOH C 22 5070 5070 HOH WAT . 
U 4 HOH C 23 5076 5076 HOH WAT . 
U 4 HOH C 24 5080 5080 HOH WAT . 
U 4 HOH C 25 5085 5085 HOH WAT . 
U 4 HOH C 26 5088 5088 HOH WAT . 
U 4 HOH C 27 5092 5092 HOH WAT . 
U 4 HOH C 28 5095 5095 HOH WAT . 
U 4 HOH C 29 5096 5096 HOH WAT . 
U 4 HOH C 30 5097 5097 HOH WAT . 
U 4 HOH C 31 5102 5102 HOH WAT . 
U 4 HOH C 32 5105 5105 HOH WAT . 
U 4 HOH C 33 5109 5109 HOH WAT . 
U 4 HOH C 34 5112 5112 HOH WAT . 
U 4 HOH C 35 5116 5116 HOH WAT . 
U 4 HOH C 36 5117 5117 HOH WAT . 
U 4 HOH C 37 5122 5122 HOH WAT . 
U 4 HOH C 38 5128 5128 HOH WAT . 
U 4 HOH C 39 5131 5131 HOH WAT . 
U 4 HOH C 40 5132 5132 HOH WAT . 
U 4 HOH C 41 5133 5133 HOH WAT . 
U 4 HOH C 42 5134 5134 HOH WAT . 
U 4 HOH C 43 5140 5140 HOH WAT . 
U 4 HOH C 44 5152 5152 HOH WAT . 
U 4 HOH C 45 5163 5163 HOH WAT . 
U 4 HOH C 46 5167 5167 HOH WAT . 
U 4 HOH C 47 5170 5170 HOH WAT . 
V 4 HOH D 1 5006 5006 HOH WAT . 
V 4 HOH D 2 5008 5008 HOH WAT . 
V 4 HOH D 3 5011 5011 HOH WAT . 
V 4 HOH D 4 5016 5016 HOH WAT . 
V 4 HOH D 5 5019 5019 HOH WAT . 
V 4 HOH D 6 5020 5020 HOH WAT . 
V 4 HOH D 7 5023 5023 HOH WAT . 
V 4 HOH D 8 5024 5024 HOH WAT . 
V 4 HOH D 9 5025 5025 HOH WAT . 
V 4 HOH D 10 5030 5030 HOH WAT . 
V 4 HOH D 11 5033 5033 HOH WAT . 
V 4 HOH D 12 5036 5036 HOH WAT . 
V 4 HOH D 13 5041 5041 HOH WAT . 
V 4 HOH D 14 5052 5052 HOH WAT . 
V 4 HOH D 15 5054 5054 HOH WAT . 
V 4 HOH D 16 5062 5062 HOH WAT . 
V 4 HOH D 17 5064 5064 HOH WAT . 
V 4 HOH D 18 5074 5074 HOH WAT . 
V 4 HOH D 19 5075 5075 HOH WAT . 
V 4 HOH D 20 5081 5081 HOH WAT . 
V 4 HOH D 21 5083 5083 HOH WAT . 
V 4 HOH D 22 5084 5084 HOH WAT . 
V 4 HOH D 23 5091 5091 HOH WAT . 
V 4 HOH D 24 5094 5094 HOH WAT . 
V 4 HOH D 25 5098 5098 HOH WAT . 
V 4 HOH D 26 5099 5099 HOH WAT . 
V 4 HOH D 27 5103 5103 HOH WAT . 
V 4 HOH D 28 5104 5104 HOH WAT . 
V 4 HOH D 29 5106 5106 HOH WAT . 
V 4 HOH D 30 5107 5107 HOH WAT . 
V 4 HOH D 31 5111 5111 HOH WAT . 
V 4 HOH D 32 5113 5113 HOH WAT . 
V 4 HOH D 33 5130 5130 HOH WAT . 
V 4 HOH D 34 5135 5135 HOH WAT . 
V 4 HOH D 35 5138 5138 HOH WAT . 
V 4 HOH D 36 5143 5143 HOH WAT . 
V 4 HOH D 37 5148 5148 HOH WAT . 
V 4 HOH D 38 5151 5151 HOH WAT . 
V 4 HOH D 39 5157 5157 HOH WAT . 
V 4 HOH D 40 5158 5158 HOH WAT . 
V 4 HOH D 41 5159 5159 HOH WAT . 
V 4 HOH D 42 5160 5160 HOH WAT . 
V 4 HOH D 43 5161 5161 HOH WAT . 
V 4 HOH D 44 5162 5162 HOH WAT . 
V 4 HOH D 45 5171 5171 HOH WAT . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . N 3 19.065 -61.197 75.57 1 68.47 ? C1 MPD 3003 C 1 
HETATM 2 C C2 MPD . . . N 3 17.703 -61.862 75.468 1 68.39 ? C2 MPD 3003 C 1 
HETATM 3 O O2 MPD . . . N 3 17.242 -62.184 76.773 1 68.86 ? O2 MPD 3003 C 1 
HETATM 4 C CM MPD . . . N 3 16.757 -60.883 74.825 1 69.16 ? CM MPD 3003 C 1 
HETATM 5 C C3 MPD . . . N 3 17.754 -63.145 74.59 1 68.19 ? C3 MPD 3003 C 1 
HETATM 6 C C4 MPD . . . N 3 18.702 -64.247 75.138 1 68.3 ? C4 MPD 3003 C 1 
HETATM 7 O O4 MPD . . . N 3 18.311 -64.661 76.448 1 68.5 ? O4 MPD 3003 C 1 
HETATM 8 C C5 MPD . . . N 3 18.683 -65.462 74.207 1 67.76 ? C5 MPD 3003 C 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           8 
#