data_2E1R # _model_server_result.job_id 7wCeYz2FnwLGNHJ7fybqsQ _model_server_result.datetime_utc '2024-12-02 14:51:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e1r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":901}' # _entry.id 2E1R # _exptl.entry_id 2E1R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 519.069 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S,4S,5S,6R,9S,11S)-6-CHLORO-9-FORMYL-13-ISOPROPYL-5-METHYL-2-({[(3AR,5R,7R,7AS)-7-METHYL-3-METHYLENEHEXAHYDRO-2H-FURO[2,3-C]PYRAN-5-YL]OXY}METHYL)TETR ACYCLO[7.4.0.02,11.04,8]TRIDEC-12-ENE-1-CARBOXYLIC ACI' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2E1R _cell.length_a 116.86 _cell.length_b 158.77 _cell.length_c 60.31 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E1R _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H39 Cl O6' _chem_comp.formula_weight 519.069 _chem_comp.id SOD _chem_comp.mon_nstd_flag . _chem_comp.name '(1S,4S,5S,6R,9S,11S)-6-CHLORO-9-FORMYL-13-ISOPROPYL-5-METHYL-2-({[(3AR,5R,7R ,7AS)-7-METHYL-3-METHYLENEHEXAHYDRO-2H-FURO[2,3-C]PYRAN-5-YL]OXY}METHYL)TETR ACYCLO[7.4.0.02,11.04,8]TRIDEC-12-ENE-1-CARBOXYLIC ACI' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C5 SOD sing 333 n n C1 C4 SOD sing 334 n n C1 C3 SOD sing 335 n n C1 C2 SOD sing 336 n n C2 C7 SOD sing 337 n n C2 C6 SOD sing 338 n n C2 C8 SOD sing 339 n n C3 C10 SOD sing 340 n n C3 C11 SOD sing 341 n n C3 C9 SOD sing 342 n n C4 C12 SOD doub 343 n n C4 C13 SOD sing 344 n n C5 O14 SOD sing 345 n n C5 O15 SOD doub 346 n n C6 C12 SOD sing 347 n n C6 H6 SOD sing 348 n n C6 C10 SOD sing 349 n n C7 C16 SOD sing 350 n n C7 H71 SOD sing 351 n n C7 H72 SOD sing 352 n n C8 H81 SOD sing 353 n n C8 H82 SOD sing 354 n n C8 O17 SOD sing 355 n n C9 H9 SOD sing 356 n n C9 C18 SOD sing 357 n n C9 C16 SOD sing 358 n n C10 H101 SOD sing 359 n n C10 H102 SOD sing 360 n n C11 H11 SOD sing 361 n n C11 O19 SOD doub 362 n n C12 H12 SOD sing 363 n n C13 H13 SOD sing 364 n n C13 C20 SOD sing 365 n n C13 C21 SOD sing 366 n n O14 H14 SOD sing 367 n n C16 C22 SOD sing 368 n n C16 H16 SOD sing 369 n n O17 C52 SOD sing 370 n n C18 H181 SOD sing 371 n n C18 H182 SOD sing 372 n n C18 C24 SOD sing 373 n n C20 H201 SOD sing 374 n n C20 H202 SOD sing 375 n n C20 H203 SOD sing 376 n n C21 H211 SOD sing 377 n n C21 H212 SOD sing 378 n n C21 H213 SOD sing 379 n n C22 C24 SOD sing 380 n n C22 H22 SOD sing 381 n n C22 C25 SOD sing 382 n n C24 H24 SOD sing 383 n n C24 CL5 SOD sing 384 n n C25 H251 SOD sing 385 n n C25 H252 SOD sing 386 n n C25 H253 SOD sing 387 n n C52 H52 SOD sing 388 n n C52 O56 SOD sing 389 n n C52 C53 SOD sing 390 n n C53 C54 SOD sing 391 n n C53 H531 SOD sing 392 n n C53 H532 SOD sing 393 n n C54 C64 SOD sing 394 n n C54 C55 SOD sing 395 n n C54 H54 SOD sing 396 n n C55 C56 SOD sing 397 n n C55 H55 SOD sing 398 n n C55 O64 SOD sing 399 n n C56 O56 SOD sing 400 n n C56 H56 SOD sing 401 n n C56 C61 SOD sing 402 n n C61 H611 SOD sing 403 n n C61 H612 SOD sing 404 n n C61 H613 SOD sing 405 n n O64 C65 SOD sing 406 n n C65 H651 SOD sing 407 n n C65 H652 SOD sing 408 n n C65 C64 SOD sing 409 n n C64 C70 SOD doub 410 n n C70 H701 SOD sing 411 n n C70 H702 SOD sing 412 n n # _atom_sites.entry_id 2E1R _atom_sites.fract_transf_matrix[1][1] 0.008557 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006298 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016581 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SOD A 1 901 901 SOD SOR . C 3 GDP A 1 902 902 GDP GDP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 SOD . . . B 2 15.554 -60.805 -52.724 1 31.94 ? C1 SOD 901 A 1 HETATM 2 C C2 SOD . . . B 2 15.185 -59.295 -52.806 1 31.83 ? C2 SOD 901 A 1 HETATM 3 C C3 SOD . . . B 2 16.594 -60.872 -53.995 1 31.07 ? C3 SOD 901 A 1 HETATM 4 C C4 SOD . . . B 2 16.306 -60.829 -51.321 1 32.81 ? C4 SOD 901 A 1 HETATM 5 C C5 SOD . . . B 2 14.417 -61.906 -52.771 1 32.66 ? C5 SOD 901 A 1 HETATM 6 C C6 SOD . . . B 2 16.682 -58.935 -52.595 1 31.57 ? C6 SOD 901 A 1 HETATM 7 C C7 SOD . . . B 2 14.451 -58.874 -54.184 1 31.83 ? C7 SOD 901 A 1 HETATM 8 C C8 SOD . . . B 2 14.224 -58.72 -51.706 1 33.24 ? C8 SOD 901 A 1 HETATM 9 C C9 SOD . . . B 2 15.772 -60.75 -55.34 1 30.4 ? C9 SOD 901 A 1 HETATM 10 C C10 SOD . . . B 2 17.516 -59.636 -53.703 1 32.83 ? C10 SOD 901 A 1 HETATM 11 C C11 SOD . . . B 2 17.362 -62.212 -53.92 1 34.16 ? C11 SOD 901 A 1 HETATM 12 C C12 SOD . . . B 2 16.991 -59.611 -51.282 1 32.73 ? C12 SOD 901 A 1 HETATM 13 C C13 SOD . . . B 2 16.262 -61.938 -50.255 1 31.41 ? C13 SOD 901 A 1 HETATM 14 O O14 SOD . . . B 2 13.206 -61.521 -52.791 1 33.35 ? O14 SOD 901 A 1 HETATM 15 O O15 SOD . . . B 2 14.831 -63.095 -52.757 1 35.97 ? O15 SOD 901 A 1 HETATM 16 C C16 SOD . . . B 2 15.183 -59.319 -55.467 1 29.41 ? C16 SOD 901 A 1 HETATM 17 O O17 SOD . . . B 2 13.95 -57.333 -51.839 1 37.6 ? O17 SOD 901 A 1 HETATM 18 C C18 SOD . . . B 2 16.463 -60.821 -56.732 1 28.79 ? C18 SOD 901 A 1 HETATM 19 O O19 SOD . . . B 2 18.555 -62.356 -53.636 1 38.36 ? O19 SOD 901 A 1 HETATM 20 C C20 SOD . . . B 2 17.574 -62.121 -49.485 1 29.11 ? C20 SOD 901 A 1 HETATM 21 C C21 SOD . . . B 2 15.145 -61.676 -49.244 1 30.38 ? C21 SOD 901 A 1 HETATM 22 C C22 SOD . . . B 2 14.423 -59.411 -56.826 1 27.24 ? C22 SOD 901 A 1 HETATM 23 C C24 SOD . . . B 2 15.451 -60.19 -57.748 1 25.35 ? C24 SOD 901 A 1 HETATM 24 C C25 SOD . . . B 2 13.002 -60.026 -56.714 1 30.48 ? C25 SOD 901 A 1 HETATM 25 C C52 SOD . . . B 2 13.095 -57.001 -50.766 1 40.05 ? C52 SOD 901 A 1 HETATM 26 C C53 SOD . . . B 2 13.752 -55.858 -49.968 1 40.98 ? C53 SOD 901 A 1 HETATM 27 C C54 SOD . . . B 2 12.822 -55.574 -48.808 1 43.59 ? C54 SOD 901 A 1 HETATM 28 C C55 SOD . . . B 2 11.486 -55.128 -49.317 1 44.19 ? C55 SOD 901 A 1 HETATM 29 C C56 SOD . . . B 2 10.886 -56.299 -50.118 1 41.73 ? C56 SOD 901 A 1 HETATM 30 O O56 SOD . . . B 2 11.76 -56.606 -51.221 1 39.6 ? O56 SOD 901 A 1 HETATM 31 C C61 SOD . . . B 2 9.528 -55.93 -50.676 1 43.55 ? C61 SOD 901 A 1 HETATM 32 O O64 SOD . . . B 2 10.734 -54.797 -48.149 1 45.89 ? O64 SOD 901 A 1 HETATM 33 C C65 SOD . . . B 2 11.678 -54.047 -47.355 1 46.07 ? C65 SOD 901 A 1 HETATM 34 CL CL5 SOD . . . B 2 14.881 -61.545 -58.559 1 15.01 ? CL5 SOD 901 A 1 HETATM 35 C C64 SOD . . . B 2 13.045 -54.542 -47.779 1 45.41 ? C64 SOD 901 A 1 HETATM 36 C C70 SOD . . . B 2 14.209 -54.173 -47.253 1 49.95 ? C70 SOD 901 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #