data_2E2B
#
_model_server_result.job_id            sOpOwxnZT7VFCvcoVHcNHw 
_model_server_result.datetime_utc      '2024-10-11 01:23:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2e2b 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    2E2B 
#
_exptl.entry_id    2E2B 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              576.615 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "N-[3-(4,5'-BIPYRIMIDIN-2-YLAMINO)-4-METHYLPHENYL]-4-{[(3S)-3-(DIMETHYLAMINO)PYRROLIDIN-1-YL]METHYL}-3-(TRIFLUOROMETHYL) BENZAMIDE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            2E2B 
_cell.length_a            110.82 
_cell.length_b            147.58 
_cell.length_c            152.49 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2E2B 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        22 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C30 H31 F3 N8 O' 
_chem_comp.formula_weight    576.615 
_chem_comp.id                406 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "N-[3-(4,5'-BIPYRIMIDIN-2-YLAMINO)-4-METHYLPHENYL]-4-{[(3S)-3-(DIMETHYLAMINO)PYRROLIDIN-1-YL]METHYL}-3-(TRIFLUOROMETHYL) BENZAMIDE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     INNO-406 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C41 406 sing 1 n n 
C1 C2 406 sing 2 n y 
C1 C6 406 doub 3 n y 
C2 C3 406 doub 4 n y 
C2 H2 406 sing 5 n n 
C3 C4 406 sing 6 n y 
C3 H3 406 sing 7 n n 
C4 C11 406 sing 8 n n 
C4 C5 406 doub 9 n y 
C5 C6 406 sing 10 n y 
C5 C7 406 sing 11 n n 
C6 H6 406 sing 12 n n 
C7 F8 406 sing 13 n n 
C7 F9 406 sing 14 n n 
C7 F10 406 sing 15 n n 
C11 N12 406 sing 16 n n 
C11 H111 406 sing 17 n n 
C11 H112 406 sing 18 n n 
N12 C13 406 sing 19 n n 
N12 C16 406 sing 20 n n 
C13 C14 406 sing 21 n n 
C13 H131 406 sing 22 n n 
C13 H132 406 sing 23 n n 
C14 C15 406 sing 24 n n 
C14 H141 406 sing 25 n n 
C14 H142 406 sing 26 n n 
C15 C16 406 sing 27 n n 
C15 N17 406 sing 28 n n 
C15 H15 406 sing 29 n n 
C16 H161 406 sing 30 n n 
C16 H162 406 sing 31 n n 
N17 C18 406 sing 32 n n 
N17 C19 406 sing 33 n n 
C18 H181 406 sing 34 n n 
C18 H182 406 sing 35 n n 
C18 H183 406 sing 36 n n 
C19 H191 406 sing 37 n n 
C19 H192 406 sing 38 n n 
C19 H193 406 sing 39 n n 
N20 C25 406 sing 40 n y 
N20 C21 406 doub 41 n y 
C21 N22 406 sing 42 n y 
C21 H21 406 sing 43 n n 
N22 C23 406 doub 44 n y 
C23 C24 406 sing 45 n y 
C23 H23 406 sing 46 n n 
C24 C26 406 sing 47 n y 
C24 C25 406 doub 48 n y 
C25 H25 406 sing 49 n n 
C26 C31 406 doub 50 n y 
C26 N27 406 sing 51 n y 
N27 C28 406 doub 52 n y 
C28 N32 406 sing 53 n n 
C28 N29 406 sing 54 n y 
N29 C30 406 doub 55 n y 
C30 C31 406 sing 56 n y 
C30 H30 406 sing 57 n n 
C31 H31 406 sing 58 n n 
N32 C38 406 sing 59 n n 
N32 H32 406 sing 60 n n 
C33 C34 406 sing 61 n y 
C33 C38 406 doub 62 n y 
C33 H33 406 sing 63 n n 
C34 C35 406 doub 64 n y 
C34 N40 406 sing 65 n n 
C35 C36 406 sing 66 n y 
C35 H35 406 sing 67 n n 
C36 C37 406 doub 68 n y 
C36 H36 406 sing 69 n n 
C37 C39 406 sing 70 n n 
C37 C38 406 sing 71 n y 
C39 H391 406 sing 72 n n 
C39 H392 406 sing 73 n n 
C39 H393 406 sing 74 n n 
N40 C41 406 sing 75 n n 
N40 H40 406 sing 76 n n 
C41 O42 406 doub 77 n n 
#
_atom_sites.entry_id                     2E2B 
_atom_sites.fract_transf_matrix[1][1]    0.009024 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006776 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006558 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 406 A 1 1001 1001 406 406 . 
D 2 406 B 1 1002 1002 406 406 . 
E 3 HOH A 1 1 1 HOH HOH . 
E 3 HOH A 2 2 2 HOH HOH . 
E 3 HOH A 3 3 3 HOH HOH . 
E 3 HOH A 4 4 4 HOH HOH . 
E 3 HOH A 5 5 5 HOH HOH . 
E 3 HOH A 6 7 7 HOH HOH . 
E 3 HOH A 7 8 8 HOH HOH . 
E 3 HOH A 8 9 9 HOH HOH . 
E 3 HOH A 9 10 10 HOH HOH . 
E 3 HOH A 10 11 11 HOH HOH . 
E 3 HOH A 11 12 12 HOH HOH . 
E 3 HOH A 12 13 13 HOH HOH . 
E 3 HOH A 13 16 16 HOH HOH . 
E 3 HOH A 14 17 17 HOH HOH . 
E 3 HOH A 15 21 21 HOH HOH . 
E 3 HOH A 16 24 24 HOH HOH . 
E 3 HOH A 17 25 25 HOH HOH . 
E 3 HOH A 18 27 27 HOH HOH . 
E 3 HOH A 19 29 29 HOH HOH . 
E 3 HOH A 20 31 31 HOH HOH . 
E 3 HOH A 21 35 35 HOH HOH . 
E 3 HOH A 22 36 36 HOH HOH . 
E 3 HOH A 23 37 37 HOH HOH . 
E 3 HOH A 24 40 40 HOH HOH . 
E 3 HOH A 25 41 41 HOH HOH . 
E 3 HOH A 26 42 42 HOH HOH . 
E 3 HOH A 27 45 45 HOH HOH . 
E 3 HOH A 28 46 46 HOH HOH . 
E 3 HOH A 29 47 47 HOH HOH . 
E 3 HOH A 30 48 48 HOH HOH . 
E 3 HOH A 31 49 49 HOH HOH . 
E 3 HOH A 32 51 51 HOH HOH . 
E 3 HOH A 33 52 52 HOH HOH . 
E 3 HOH A 34 54 54 HOH HOH . 
E 3 HOH A 35 56 56 HOH HOH . 
E 3 HOH A 36 57 57 HOH HOH . 
E 3 HOH A 37 58 58 HOH HOH . 
E 3 HOH A 38 59 59 HOH HOH . 
E 3 HOH A 39 61 61 HOH HOH . 
E 3 HOH A 40 64 64 HOH HOH . 
E 3 HOH A 41 66 66 HOH HOH . 
E 3 HOH A 42 67 67 HOH HOH . 
E 3 HOH A 43 68 68 HOH HOH . 
E 3 HOH A 44 69 69 HOH HOH . 
E 3 HOH A 45 70 70 HOH HOH . 
E 3 HOH A 46 71 71 HOH HOH . 
E 3 HOH A 47 72 72 HOH HOH . 
E 3 HOH A 48 75 75 HOH HOH . 
E 3 HOH A 49 76 76 HOH HOH . 
E 3 HOH A 50 80 80 HOH HOH . 
E 3 HOH A 51 81 81 HOH HOH . 
E 3 HOH A 52 83 83 HOH HOH . 
E 3 HOH A 53 84 84 HOH HOH . 
E 3 HOH A 54 86 86 HOH HOH . 
E 3 HOH A 55 87 87 HOH HOH . 
E 3 HOH A 56 89 89 HOH HOH . 
E 3 HOH A 57 90 90 HOH HOH . 
E 3 HOH A 58 93 93 HOH HOH . 
E 3 HOH A 59 94 94 HOH HOH . 
E 3 HOH A 60 95 95 HOH HOH . 
E 3 HOH A 61 96 96 HOH HOH . 
E 3 HOH A 62 99 99 HOH HOH . 
E 3 HOH A 63 102 102 HOH HOH . 
E 3 HOH A 64 103 103 HOH HOH . 
E 3 HOH A 65 105 105 HOH HOH . 
E 3 HOH A 66 106 106 HOH HOH . 
E 3 HOH A 67 108 108 HOH HOH . 
E 3 HOH A 68 109 109 HOH HOH . 
E 3 HOH A 69 110 110 HOH HOH . 
E 3 HOH A 70 113 113 HOH HOH . 
E 3 HOH A 71 114 114 HOH HOH . 
E 3 HOH A 72 117 117 HOH HOH . 
E 3 HOH A 73 118 118 HOH HOH . 
E 3 HOH A 74 119 119 HOH HOH . 
E 3 HOH A 75 122 122 HOH HOH . 
E 3 HOH A 76 123 123 HOH HOH . 
E 3 HOH A 77 124 124 HOH HOH . 
E 3 HOH A 78 125 125 HOH HOH . 
E 3 HOH A 79 128 128 HOH HOH . 
E 3 HOH A 80 129 129 HOH HOH . 
E 3 HOH A 81 130 130 HOH HOH . 
E 3 HOH A 82 131 131 HOH HOH . 
E 3 HOH A 83 132 132 HOH HOH . 
E 3 HOH A 84 133 133 HOH HOH . 
E 3 HOH A 85 137 137 HOH HOH . 
E 3 HOH A 86 138 138 HOH HOH . 
E 3 HOH A 87 139 139 HOH HOH . 
E 3 HOH A 88 140 140 HOH HOH . 
F 3 HOH B 1 6 6 HOH HOH . 
F 3 HOH B 2 14 14 HOH HOH . 
F 3 HOH B 3 15 15 HOH HOH . 
F 3 HOH B 4 18 18 HOH HOH . 
F 3 HOH B 5 19 19 HOH HOH . 
F 3 HOH B 6 20 20 HOH HOH . 
F 3 HOH B 7 22 22 HOH HOH . 
F 3 HOH B 8 23 23 HOH HOH . 
F 3 HOH B 9 26 26 HOH HOH . 
F 3 HOH B 10 28 28 HOH HOH . 
F 3 HOH B 11 30 30 HOH HOH . 
F 3 HOH B 12 32 32 HOH HOH . 
F 3 HOH B 13 33 33 HOH HOH . 
F 3 HOH B 14 34 34 HOH HOH . 
F 3 HOH B 15 38 38 HOH HOH . 
F 3 HOH B 16 43 43 HOH HOH . 
F 3 HOH B 17 44 44 HOH HOH . 
F 3 HOH B 18 50 50 HOH HOH . 
F 3 HOH B 19 53 53 HOH HOH . 
F 3 HOH B 20 55 55 HOH HOH . 
F 3 HOH B 21 60 60 HOH HOH . 
F 3 HOH B 22 62 62 HOH HOH . 
F 3 HOH B 23 63 63 HOH HOH . 
F 3 HOH B 24 65 65 HOH HOH . 
F 3 HOH B 25 73 73 HOH HOH . 
F 3 HOH B 26 74 74 HOH HOH . 
F 3 HOH B 27 77 77 HOH HOH . 
F 3 HOH B 28 78 78 HOH HOH . 
F 3 HOH B 29 79 79 HOH HOH . 
F 3 HOH B 30 82 82 HOH HOH . 
F 3 HOH B 31 85 85 HOH HOH . 
F 3 HOH B 32 88 88 HOH HOH . 
F 3 HOH B 33 91 91 HOH HOH . 
F 3 HOH B 34 98 98 HOH HOH . 
F 3 HOH B 35 101 101 HOH HOH . 
F 3 HOH B 36 104 104 HOH HOH . 
F 3 HOH B 37 107 107 HOH HOH . 
F 3 HOH B 38 111 111 HOH HOH . 
F 3 HOH B 39 112 112 HOH HOH . 
F 3 HOH B 40 116 116 HOH HOH . 
F 3 HOH B 41 120 120 HOH HOH . 
F 3 HOH B 42 121 121 HOH HOH . 
F 3 HOH B 43 126 126 HOH HOH . 
F 3 HOH B 44 134 134 HOH HOH . 
F 3 HOH B 45 135 135 HOH HOH . 
F 3 HOH B 46 136 136 HOH HOH . 
F 3 HOH B 47 141 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 406 . . . C 2 15.655 50.546 16.618 1 38.65 ? C1 406 1001 A 1 
HETATM 2 C C2 406 . . . C 2 16.772 49.68 16.841 1 37.93 ? C2 406 1001 A 1 
HETATM 3 C C3 406 . . . C 2 16.658 48.568 17.703 1 37.95 ? C3 406 1001 A 1 
HETATM 4 C C4 406 . . . C 2 15.408 48.274 18.395 1 38.26 ? C4 406 1001 A 1 
HETATM 5 C C5 406 . . . C 2 14.247 49.167 18.171 1 37.89 ? C5 406 1001 A 1 
HETATM 6 C C6 406 . . . C 2 14.422 50.263 17.29 1 37.86 ? C6 406 1001 A 1 
HETATM 7 C C7 406 . . . C 2 12.832 49.003 18.836 1 38.38 ? C7 406 1001 A 1 
HETATM 8 F F8 406 . . . C 2 12.946 49.165 20.183 1 39.18 ? F8 406 1001 A 1 
HETATM 9 F F9 406 . . . C 2 12.319 47.772 18.583 1 37.72 ? F9 406 1001 A 1 
HETATM 10 F F10 406 . . . C 2 11.942 49.965 18.43 1 39.32 ? F10 406 1001 A 1 
HETATM 11 C C11 406 . . . C 2 15.42 47.02 19.323 1 37.72 ? C11 406 1001 A 1 
HETATM 12 N N12 406 . . . C 2 16.682 46.627 20.007 1 39.41 ? N12 406 1001 A 1 
HETATM 13 C C13 406 . . . C 2 16.677 45.304 20.662 1 38.92 ? C13 406 1001 A 1 
HETATM 14 C C14 406 . . . C 2 17.182 45.567 22.085 1 38.65 ? C14 406 1001 A 1 
HETATM 15 C C15 406 . . . C 2 18.092 46.795 21.839 1 38.81 ? C15 406 1001 A 1 
HETATM 16 C C16 406 . . . C 2 17.145 47.624 21.009 1 38.57 ? C16 406 1001 A 1 
HETATM 17 N N17 406 . . . C 2 18.628 47.508 23.083 1 39.14 ? N17 406 1001 A 1 
HETATM 18 C C18 406 . . . C 2 19.541 46.725 23.942 1 39.06 ? C18 406 1001 A 1 
HETATM 19 C C19 406 . . . C 2 19.254 48.823 22.689 1 38.52 ? C19 406 1001 A 1 
HETATM 20 N N20 406 . . . C 2 11.545 62.016 12.162 1 38.22 ? N20 406 1001 A 1 
HETATM 21 C C21 406 . . . C 2 10.626 61.38 11.413 1 38.54 ? C21 406 1001 A 1 
HETATM 22 N N22 406 . . . C 2 10.67 60.101 11.016 1 38.06 ? N22 406 1001 A 1 
HETATM 23 C C23 406 . . . C 2 11.745 59.364 11.404 1 37.81 ? C23 406 1001 A 1 
HETATM 24 C C24 406 . . . C 2 12.852 59.902 12.229 1 38.59 ? C24 406 1001 A 1 
HETATM 25 C C25 406 . . . C 2 12.629 61.315 12.563 1 38.35 ? C25 406 1001 A 1 
HETATM 26 C C26 406 . . . C 2 13.947 59.119 12.615 1 38.69 ? C26 406 1001 A 1 
HETATM 27 N N27 406 . . . C 2 13.994 57.803 12.215 1 38.34 ? N27 406 1001 A 1 
HETATM 28 C C28 406 . . . C 2 15.014 57.032 12.558 1 38.4 ? C28 406 1001 A 1 
HETATM 29 N N29 406 . . . C 2 16.061 57.422 13.272 1 38.67 ? N29 406 1001 A 1 
HETATM 30 C C30 406 . . . C 2 16.106 58.723 13.721 1 38.37 ? C30 406 1001 A 1 
HETATM 31 C C31 406 . . . C 2 15.07 59.649 13.425 1 38.28 ? C31 406 1001 A 1 
HETATM 32 N N32 406 . . . C 2 14.948 55.725 12.093 1 38.25 ? N32 406 1001 A 1 
HETATM 33 C C33 406 . . . C 2 15.7 53.849 13.382 1 37.7 ? C33 406 1001 A 1 
HETATM 34 C C34 406 . . . C 2 16.638 52.771 13.625 1 37.97 ? C34 406 1001 A 1 
HETATM 35 C C35 406 . . . C 2 17.725 52.587 12.739 1 37.8 ? C35 406 1001 A 1 
HETATM 36 C C36 406 . . . C 2 17.895 53.459 11.612 1 37.87 ? C36 406 1001 A 1 
HETATM 37 C C37 406 . . . C 2 16.964 54.52 11.38 1 38.2 ? C37 406 1001 A 1 
HETATM 38 C C38 406 . . . C 2 15.875 54.697 12.275 1 38.49 ? C38 406 1001 A 1 
HETATM 39 C C39 406 . . . C 2 17.237 55.392 10.156 1 38.08 ? C39 406 1001 A 1 
HETATM 40 N N40 406 . . . C 2 16.533 51.861 14.735 1 37.15 ? N40 406 1001 A 1 
HETATM 41 C C41 406 . . . C 2 15.66 51.753 15.737 1 37.79 ? C41 406 1001 A 1 
HETATM 42 O O42 406 . . . C 2 14.855 52.655 15.971 1 38.78 ? O42 406 1001 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           42 
#