data_2E2X # _model_server_result.job_id s24n3VLnri0wmmpWPg5AUw _model_server_result.datetime_utc '2025-02-26 05:19:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":400}' # _entry.id 2E2X # _exptl.entry_id 2E2X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 720.012 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2E2X _cell.length_a 110.1 _cell.length_b 110.1 _cell.length_c 121.9 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C39 H78 N O8 P' _chem_comp.formula_weight 720.012 _chem_comp.id PEV _chem_comp.mon_nstd_flag . _chem_comp.name '(1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms PHOSPHATIDYLETHANOLAMINE;1-PALMITOYL-2-OLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C48 C47 PEV sing 237 n n C48 H481 PEV sing 238 n n C48 H482 PEV sing 239 n n C48 H483 PEV sing 240 n n C47 C46 PEV sing 241 n n C47 H471 PEV sing 242 n n C47 H472 PEV sing 243 n n C46 C45 PEV sing 244 n n C46 H461 PEV sing 245 n n C46 H462 PEV sing 246 n n C45 C44 PEV sing 247 n n C45 H451 PEV sing 248 n n C45 H452 PEV sing 249 n n C44 C43 PEV sing 250 n n C44 H441 PEV sing 251 n n C44 H442 PEV sing 252 n n C43 C42 PEV sing 253 n n C43 H431 PEV sing 254 n n C43 H432 PEV sing 255 n n C42 C41 PEV sing 256 n n C42 H421 PEV sing 257 n n C42 H422 PEV sing 258 n n C41 C40 PEV sing 259 n n C41 H411 PEV sing 260 n n C41 H412 PEV sing 261 n n C40 C39 PEV sing 262 n n C40 H401 PEV sing 263 n n C40 H402 PEV sing 264 n n C39 C38 PEV sing 265 n n C39 H391 PEV sing 266 n n C39 H392 PEV sing 267 n n C38 C37 PEV sing 268 n n C38 H381 PEV sing 269 n n C38 H382 PEV sing 270 n n C37 C36 PEV sing 271 n n C37 H371 PEV sing 272 n n C37 H372 PEV sing 273 n n C36 C35 PEV sing 274 n n C36 H361 PEV sing 275 n n C36 H362 PEV sing 276 n n C35 C34 PEV sing 277 n n C35 H351 PEV sing 278 n n C35 H352 PEV sing 279 n n C34 C33 PEV sing 280 n n C34 H341 PEV sing 281 n n C34 H342 PEV sing 282 n n C33 C32 PEV sing 283 n n C33 H331 PEV sing 284 n n C33 H332 PEV sing 285 n n C32 C31 PEV sing 286 n n C32 H321 PEV sing 287 n n C32 H322 PEV sing 288 n n C31 O31 PEV doub 289 n n C31 O2 PEV sing 290 n n O2 C2 PEV sing 291 n n C2 C1 PEV sing 292 n n C2 C3 PEV sing 293 n n C2 H2 PEV sing 294 n n C1 O3P PEV sing 295 n n C1 H11 PEV sing 296 n n C1 H12 PEV sing 297 n n O3P P PEV sing 298 n n P O1P PEV doub 299 n n P O2P PEV sing 300 n n P O4P PEV sing 301 n n O2P HO2P PEV sing 302 n n O4P C4 PEV sing 303 n n C4 C5 PEV sing 304 n n C4 H41 PEV sing 305 n n C4 H42 PEV sing 306 n n C5 N6 PEV sing 307 n n C5 H51 PEV sing 308 n n C5 H52 PEV sing 309 n n N6 HN61 PEV sing 310 n n N6 HN62 PEV sing 311 n n C3 O3 PEV sing 312 n n C3 H31 PEV sing 313 n n C3 H32 PEV sing 314 n n O3 C11 PEV sing 315 n n C11 O11 PEV doub 316 n n C11 C12 PEV sing 317 n n C12 C13 PEV sing 318 n n C12 H121 PEV sing 319 n n C12 H122 PEV sing 320 n n C13 C14 PEV sing 321 n n C13 H131 PEV sing 322 n n C13 H132 PEV sing 323 n n C14 C15 PEV sing 324 n n C14 H141 PEV sing 325 n n C14 H142 PEV sing 326 n n C15 C16 PEV sing 327 n n C15 H151 PEV sing 328 n n C15 H152 PEV sing 329 n n C16 C17 PEV sing 330 n n C16 H161 PEV sing 331 n n C16 H162 PEV sing 332 n n C17 C18 PEV sing 333 n n C17 H171 PEV sing 334 n n C17 H172 PEV sing 335 n n C18 C19 PEV sing 336 n n C18 H181 PEV sing 337 n n C18 H182 PEV sing 338 n n C19 C20 PEV sing 339 n n C19 H191 PEV sing 340 n n C19 H192 PEV sing 341 n n C20 C21 PEV sing 342 n n C20 H201 PEV sing 343 n n C20 H202 PEV sing 344 n n C21 C22 PEV sing 345 n n C21 H211 PEV sing 346 n n C21 H212 PEV sing 347 n n C22 C23 PEV sing 348 n n C22 H221 PEV sing 349 n n C22 H222 PEV sing 350 n n C23 C24 PEV sing 351 n n C23 H231 PEV sing 352 n n C23 H232 PEV sing 353 n n C24 C25 PEV sing 354 n n C24 H241 PEV sing 355 n n C24 H242 PEV sing 356 n n C25 C26 PEV sing 357 n n C25 H251 PEV sing 358 n n C25 H252 PEV sing 359 n n C26 H261 PEV sing 360 n n C26 H262 PEV sing 361 n n C26 H263 PEV sing 362 n n # _atom_sites.entry_id 2E2X _atom_sites.fract_transf_matrix[1][1] 0.009083 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009083 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEV A 1 400 400 PEV PTY . D 2 PEV B 1 500 500 PEV PTY . E 3 POP B 1 601 601 POP POP . F 3 POP B 1 602 602 POP POP . G 4 HOH A 1 1817 4 HOH HOH . G 4 HOH A 2 1818 5 HOH HOH . G 4 HOH A 3 1819 8 HOH HOH . G 4 HOH A 4 1820 12 HOH HOH . G 4 HOH A 5 1821 14 HOH HOH . G 4 HOH A 6 1822 16 HOH HOH . G 4 HOH A 7 1823 18 HOH HOH . G 4 HOH A 8 1824 20 HOH HOH . G 4 HOH A 9 1825 22 HOH HOH . G 4 HOH A 10 1826 23 HOH HOH . G 4 HOH A 11 1827 24 HOH HOH . G 4 HOH A 12 1828 27 HOH HOH . G 4 HOH A 13 1829 29 HOH HOH . G 4 HOH A 14 1830 30 HOH HOH . G 4 HOH A 15 1831 35 HOH HOH . G 4 HOH A 16 1832 38 HOH HOH . G 4 HOH A 17 1833 40 HOH HOH . G 4 HOH A 18 1834 42 HOH HOH . G 4 HOH A 19 1835 43 HOH HOH . G 4 HOH A 20 1836 44 HOH HOH . G 4 HOH A 21 1837 46 HOH HOH . G 4 HOH A 22 1838 47 HOH HOH . G 4 HOH A 23 1839 51 HOH HOH . G 4 HOH A 24 1840 55 HOH HOH . G 4 HOH A 25 1841 58 HOH HOH . G 4 HOH A 26 1842 61 HOH HOH . G 4 HOH A 27 1843 62 HOH HOH . G 4 HOH A 28 1844 68 HOH HOH . G 4 HOH A 29 1845 70 HOH HOH . G 4 HOH A 30 1846 77 HOH HOH . H 4 HOH B 1 1817 1 HOH HOH . H 4 HOH B 2 1818 2 HOH HOH . H 4 HOH B 3 1819 3 HOH HOH . H 4 HOH B 4 1820 6 HOH HOH . H 4 HOH B 5 1821 7 HOH HOH . H 4 HOH B 6 1822 9 HOH HOH . H 4 HOH B 7 1823 10 HOH HOH . H 4 HOH B 8 1824 11 HOH HOH . H 4 HOH B 9 1825 13 HOH HOH . H 4 HOH B 10 1826 15 HOH HOH . H 4 HOH B 11 1827 17 HOH HOH . H 4 HOH B 12 1828 19 HOH HOH . H 4 HOH B 13 1829 21 HOH HOH . H 4 HOH B 14 1830 25 HOH HOH . H 4 HOH B 15 1831 26 HOH HOH . H 4 HOH B 16 1832 28 HOH HOH . H 4 HOH B 17 1833 31 HOH HOH . H 4 HOH B 18 1834 32 HOH HOH . H 4 HOH B 19 1835 33 HOH HOH . H 4 HOH B 20 1836 36 HOH HOH . H 4 HOH B 21 1837 37 HOH HOH . H 4 HOH B 22 1838 39 HOH HOH . H 4 HOH B 23 1839 41 HOH HOH . H 4 HOH B 24 1840 45 HOH HOH . H 4 HOH B 25 1841 48 HOH HOH . H 4 HOH B 26 1842 49 HOH HOH . H 4 HOH B 27 1843 50 HOH HOH . H 4 HOH B 28 1844 52 HOH HOH . H 4 HOH B 29 1845 53 HOH HOH . H 4 HOH B 30 1846 54 HOH HOH . H 4 HOH B 31 1847 60 HOH HOH . H 4 HOH B 32 1848 63 HOH HOH . H 4 HOH B 33 1849 64 HOH HOH . H 4 HOH B 34 1850 65 HOH HOH . H 4 HOH B 35 1851 66 HOH HOH . H 4 HOH B 36 1852 67 HOH HOH . H 4 HOH B 37 1853 69 HOH HOH . H 4 HOH B 38 1854 71 HOH HOH . H 4 HOH B 39 1855 72 HOH HOH . H 4 HOH B 40 1856 73 HOH HOH . H 4 HOH B 41 1857 74 HOH HOH . H 4 HOH B 42 1858 75 HOH HOH . H 4 HOH B 43 1859 76 HOH HOH . H 4 HOH B 44 1860 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C48 PEV . . . C 2 -30.296 14.349 20.968 0 20 ? C48 PEV 400 A 1 HETATM 2 C C47 PEV . . . C 2 -29.654 14.466 19.63 1 74.92 ? C47 PEV 400 A 1 HETATM 3 C C46 PEV . . . C 2 -29.357 15.778 18.898 1 72.34 ? C46 PEV 400 A 1 HETATM 4 C C45 PEV . . . C 2 -29.776 15.693 17.43 1 70.18 ? C45 PEV 400 A 1 HETATM 5 C C44 PEV . . . C 2 -29.539 17.022 16.709 1 70.05 ? C44 PEV 400 A 1 HETATM 6 C C43 PEV . . . C 2 -30.127 16.965 15.297 1 69.54 ? C43 PEV 400 A 1 HETATM 7 C C42 PEV . . . C 2 -30.049 18.305 14.56 1 67.85 ? C42 PEV 400 A 1 HETATM 8 C C41 PEV . . . C 2 -28.616 18.659 14.159 1 68.32 ? C41 PEV 400 A 1 HETATM 9 C C40 PEV . . . C 2 -28.605 19.804 13.144 1 66.98 ? C40 PEV 400 A 1 HETATM 10 C C39 PEV . . . C 2 -27.211 19.98 12.538 1 69.45 ? C39 PEV 400 A 1 HETATM 11 C C38 PEV . . . C 2 -26.263 20.829 13.389 1 70.19 ? C38 PEV 400 A 1 HETATM 12 C C37 PEV . . . C 2 -26.023 20.305 14.81 1 71.17 ? C37 PEV 400 A 1 HETATM 13 C C36 PEV . . . C 2 -25.367 18.924 14.851 1 70.72 ? C36 PEV 400 A 1 HETATM 14 C C35 PEV . . . C 2 -24.959 18.541 16.278 1 72.18 ? C35 PEV 400 A 1 HETATM 15 C C34 PEV . . . C 2 -26.159 18.485 17.227 1 73.68 ? C34 PEV 400 A 1 HETATM 16 C C33 PEV . . . C 2 -25.749 18.175 18.669 1 76.61 ? C33 PEV 400 A 1 HETATM 17 C C32 PEV . . . C 2 -26.972 18.243 19.587 1 79.43 ? C32 PEV 400 A 1 HETATM 18 C C31 PEV . . . C 2 -26.67 17.873 21.041 1 80.47 ? C31 PEV 400 A 1 HETATM 19 O O31 PEV . . . C 2 -25.608 18.209 21.569 1 79.8 ? O31 PEV 400 A 1 HETATM 20 O O2 PEV . . . C 2 -27.62 17.202 21.747 1 82.05 ? O2 PEV 400 A 1 HETATM 21 C C2 PEV . . . C 2 -27.23 16.854 23.086 1 81.94 ? C2 PEV 400 A 1 HETATM 22 C C1 PEV . . . C 2 -28.281 17.302 24.105 1 82.47 ? C1 PEV 400 A 1 HETATM 23 O O3P PEV . . . C 2 -28.635 18.683 23.985 1 84.71 ? O3P PEV 400 A 1 HETATM 24 P P PEV . . . C 2 -29.503 19.397 25.141 1 84.56 ? P PEV 400 A 1 HETATM 25 O O1P PEV . . . C 2 -29.761 20.798 24.74 1 85.35 ? O1P PEV 400 A 1 HETATM 26 O O2P PEV . . . C 2 -28.813 19.15 26.428 1 86.09 ? O2P PEV 400 A 1 HETATM 27 O O4P PEV . . . C 2 -30.9 18.599 25.154 1 82.25 ? O4P PEV 400 A 1 HETATM 28 C C4 PEV . . . C 2 -31.897 18.977 26.106 1 81.77 ? C4 PEV 400 A 1 HETATM 29 C C5 PEV . . . C 2 -33.115 18.062 25.975 1 81.91 ? C5 PEV 400 A 1 HETATM 30 N N6 PEV . . . C 2 -32.709 16.674 26.236 1 82.55 ? N6 PEV 400 A 1 HETATM 31 C C3 PEV . . . C 2 -27.193 15.337 23.187 1 80.64 ? C3 PEV 400 A 1 HETATM 32 O O3 PEV . . . C 2 -26.173 14.731 22.376 1 78.13 ? O3 PEV 400 A 1 HETATM 33 C C11 PEV . . . C 2 -26.471 13.447 22.067 1 77.42 ? C11 PEV 400 A 1 HETATM 34 O O11 PEV . . . C 2 -27.58 12.966 22.364 1 76.44 ? O11 PEV 400 A 1 HETATM 35 C C12 PEV . . . C 2 -25.453 12.59 21.317 1 76.08 ? C12 PEV 400 A 1 HETATM 36 C C13 PEV . . . C 2 -25.589 12.655 19.792 1 74.81 ? C13 PEV 400 A 1 HETATM 37 C C14 PEV . . . C 2 -26.816 11.903 19.271 1 71.91 ? C14 PEV 400 A 1 HETATM 38 C C15 PEV . . . C 2 -26.854 11.844 17.74 1 71.31 ? C15 PEV 400 A 1 HETATM 39 C C16 PEV . . . C 2 -26.981 13.225 17.091 1 70.68 ? C16 PEV 400 A 1 HETATM 40 C C17 PEV . . . C 2 -27.201 13.112 15.581 1 67.05 ? C17 PEV 400 A 1 HETATM 41 C C18 PEV . . . C 2 -27.37 14.481 14.918 1 65.69 ? C18 PEV 400 A 1 HETATM 42 C C19 PEV . . . C 2 -27.79 14.309 13.456 1 64.87 ? C19 PEV 400 A 1 HETATM 43 C C20 PEV . . . C 2 -27.927 15.635 12.704 1 63.29 ? C20 PEV 400 A 1 HETATM 44 C C21 PEV . . . C 2 -28.26 15.376 11.232 1 62.19 ? C21 PEV 400 A 1 HETATM 45 C C22 PEV . . . C 2 -28.121 16.633 10.368 1 61.81 ? C22 PEV 400 A 1 HETATM 46 C C23 PEV . . . C 2 -29.327 17.571 10.446 1 61.16 ? C23 PEV 400 A 1 HETATM 47 C C24 PEV . . . C 2 -30.501 17.038 9.621 1 59.4 ? C24 PEV 400 A 1 HETATM 48 C C25 PEV . . . C 2 -31.392 17.947 8.806 0 20 ? C25 PEV 400 A 1 HETATM 49 C C26 PEV . . . C 2 -32.671 18.205 8.058 0 20 ? C26 PEV 400 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 49 #