data_2E48 # _model_server_result.job_id mu5dYs3u5c7evkhZlfvoQg _model_server_result.datetime_utc '2024-11-24 01:02:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e48 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1351}' # _entry.id 2E48 # _exptl.entry_id 2E48 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2E48 _cell.length_a 149.652 _cell.length_b 181.727 _cell.length_c 50.815 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E48 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2E48 _atom_sites.fract_transf_matrix[1][1] 0.006682 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 351 351 FAD FAD . F 2 FAD B 1 1351 1351 FAD FAD . G 2 FAD C 1 2351 2351 FAD FAD . H 2 FAD D 1 3351 3351 FAD FAD . I 3 HOH A 1 352 6 HOH HOH . I 3 HOH A 2 353 10 HOH HOH . I 3 HOH A 3 354 14 HOH HOH . I 3 HOH A 4 355 15 HOH HOH . I 3 HOH A 5 356 20 HOH HOH . I 3 HOH A 6 357 23 HOH HOH . I 3 HOH A 7 358 27 HOH HOH . I 3 HOH A 8 359 35 HOH HOH . I 3 HOH A 9 360 36 HOH HOH . I 3 HOH A 10 361 38 HOH HOH . I 3 HOH A 11 362 42 HOH HOH . I 3 HOH A 12 363 44 HOH HOH . I 3 HOH A 13 364 47 HOH HOH . I 3 HOH A 14 365 50 HOH HOH . I 3 HOH A 15 366 51 HOH HOH . I 3 HOH A 16 367 52 HOH HOH . I 3 HOH A 17 368 55 HOH HOH . I 3 HOH A 18 369 61 HOH HOH . I 3 HOH A 19 370 62 HOH HOH . I 3 HOH A 20 371 66 HOH HOH . I 3 HOH A 21 372 67 HOH HOH . I 3 HOH A 22 373 73 HOH HOH . I 3 HOH A 23 374 75 HOH HOH . I 3 HOH A 24 375 77 HOH HOH . I 3 HOH A 25 376 78 HOH HOH . I 3 HOH A 26 377 83 HOH HOH . I 3 HOH A 27 378 86 HOH HOH . I 3 HOH A 28 379 95 HOH HOH . I 3 HOH A 29 380 99 HOH HOH . I 3 HOH A 30 381 100 HOH HOH . I 3 HOH A 31 382 101 HOH HOH . I 3 HOH A 32 383 103 HOH HOH . I 3 HOH A 33 384 105 HOH HOH . I 3 HOH A 34 385 110 HOH HOH . I 3 HOH A 35 386 117 HOH HOH . I 3 HOH A 36 387 121 HOH HOH . I 3 HOH A 37 388 125 HOH HOH . I 3 HOH A 38 389 131 HOH HOH . I 3 HOH A 39 390 132 HOH HOH . J 3 HOH B 1 1 1 HOH HOH . J 3 HOH B 2 2 2 HOH HOH . J 3 HOH B 3 5 5 HOH HOH . J 3 HOH B 4 13 13 HOH HOH . J 3 HOH B 5 18 18 HOH HOH . J 3 HOH B 6 19 19 HOH HOH . J 3 HOH B 7 22 22 HOH HOH . J 3 HOH B 8 25 25 HOH HOH . J 3 HOH B 9 29 29 HOH HOH . J 3 HOH B 10 33 33 HOH HOH . J 3 HOH B 11 34 34 HOH HOH . J 3 HOH B 12 39 39 HOH HOH . J 3 HOH B 13 48 48 HOH HOH . J 3 HOH B 14 49 49 HOH HOH . J 3 HOH B 15 56 56 HOH HOH . J 3 HOH B 16 63 63 HOH HOH . J 3 HOH B 17 68 68 HOH HOH . J 3 HOH B 18 81 81 HOH HOH . J 3 HOH B 19 82 82 HOH HOH . J 3 HOH B 20 84 84 HOH HOH . J 3 HOH B 21 89 89 HOH HOH . J 3 HOH B 22 92 92 HOH HOH . J 3 HOH B 23 94 94 HOH HOH . J 3 HOH B 24 96 96 HOH HOH . J 3 HOH B 25 97 97 HOH HOH . J 3 HOH B 26 102 102 HOH HOH . J 3 HOH B 27 106 106 HOH HOH . J 3 HOH B 28 109 109 HOH HOH . J 3 HOH B 29 111 111 HOH HOH . J 3 HOH B 30 115 115 HOH HOH . J 3 HOH B 31 123 123 HOH HOH . J 3 HOH B 32 127 127 HOH HOH . J 3 HOH B 33 130 130 HOH HOH . K 3 HOH C 1 7 7 HOH HOH . K 3 HOH C 2 9 9 HOH HOH . K 3 HOH C 3 11 11 HOH HOH . K 3 HOH C 4 21 21 HOH HOH . K 3 HOH C 5 24 24 HOH HOH . K 3 HOH C 6 28 28 HOH HOH . K 3 HOH C 7 30 30 HOH HOH . K 3 HOH C 8 31 31 HOH HOH . K 3 HOH C 9 32 32 HOH HOH . K 3 HOH C 10 41 41 HOH HOH . K 3 HOH C 11 43 43 HOH HOH . K 3 HOH C 12 54 54 HOH HOH . K 3 HOH C 13 57 57 HOH HOH . K 3 HOH C 14 71 71 HOH HOH . K 3 HOH C 15 74 74 HOH HOH . K 3 HOH C 16 85 85 HOH HOH . K 3 HOH C 17 87 87 HOH HOH . K 3 HOH C 18 88 88 HOH HOH . K 3 HOH C 19 91 91 HOH HOH . K 3 HOH C 20 104 104 HOH HOH . K 3 HOH C 21 107 107 HOH HOH . K 3 HOH C 22 108 108 HOH HOH . K 3 HOH C 23 112 112 HOH HOH . K 3 HOH C 24 114 114 HOH HOH . K 3 HOH C 25 122 122 HOH HOH . K 3 HOH C 26 124 124 HOH HOH . K 3 HOH C 27 134 134 HOH HOH . L 3 HOH D 1 3 3 HOH HOH . L 3 HOH D 2 4 4 HOH HOH . L 3 HOH D 3 8 8 HOH HOH . L 3 HOH D 4 12 12 HOH HOH . L 3 HOH D 5 16 16 HOH HOH . L 3 HOH D 6 17 17 HOH HOH . L 3 HOH D 7 26 26 HOH HOH . L 3 HOH D 8 37 37 HOH HOH . L 3 HOH D 9 40 40 HOH HOH . L 3 HOH D 10 45 45 HOH HOH . L 3 HOH D 11 46 46 HOH HOH . L 3 HOH D 12 53 53 HOH HOH . L 3 HOH D 13 58 58 HOH HOH . L 3 HOH D 14 59 59 HOH HOH . L 3 HOH D 15 60 60 HOH HOH . L 3 HOH D 16 64 64 HOH HOH . L 3 HOH D 17 65 65 HOH HOH . L 3 HOH D 18 69 69 HOH HOH . L 3 HOH D 19 70 70 HOH HOH . L 3 HOH D 20 72 72 HOH HOH . L 3 HOH D 21 76 76 HOH HOH . L 3 HOH D 22 79 79 HOH HOH . L 3 HOH D 23 80 80 HOH HOH . L 3 HOH D 24 90 90 HOH HOH . L 3 HOH D 25 93 93 HOH HOH . L 3 HOH D 26 98 98 HOH HOH . L 3 HOH D 27 113 113 HOH HOH . L 3 HOH D 28 116 116 HOH HOH . L 3 HOH D 29 118 118 HOH HOH . L 3 HOH D 30 119 119 HOH HOH . L 3 HOH D 31 120 120 HOH HOH . L 3 HOH D 32 126 126 HOH HOH . L 3 HOH D 33 128 128 HOH HOH . L 3 HOH D 34 129 129 HOH HOH . L 3 HOH D 35 133 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . F 2 -38.262 -22.571 17.152 1 27.9 ? PA FAD 1351 B 1 HETATM 2 O O1A FAD . . . F 2 -38.784 -23.738 16.366 1 22.07 ? O1A FAD 1351 B 1 HETATM 3 O O2A FAD . . . F 2 -37.865 -21.376 16.347 1 29.17 ? O2A FAD 1351 B 1 HETATM 4 O O5B FAD . . . F 2 -39.331 -21.954 18.167 1 29.87 ? O5B FAD 1351 B 1 HETATM 5 C C5B FAD . . . F 2 -40.157 -20.911 17.633 1 29.43 ? C5B FAD 1351 B 1 HETATM 6 C C4B FAD . . . F 2 -41.267 -20.627 18.616 1 28.88 ? C4B FAD 1351 B 1 HETATM 7 O O4B FAD . . . F 2 -41.094 -19.269 18.997 1 29.37 ? O4B FAD 1351 B 1 HETATM 8 C C3B FAD . . . F 2 -42.584 -20.705 17.888 1 29.04 ? C3B FAD 1351 B 1 HETATM 9 O O3B FAD . . . F 2 -43.554 -21.145 18.824 1 30.12 ? O3B FAD 1351 B 1 HETATM 10 C C2B FAD . . . F 2 -42.896 -19.28 17.535 1 28.96 ? C2B FAD 1351 B 1 HETATM 11 O O2B FAD . . . F 2 -44.311 -19.129 17.425 1 30.02 ? O2B FAD 1351 B 1 HETATM 12 C C1B FAD . . . F 2 -42.291 -18.551 18.727 1 27.44 ? C1B FAD 1351 B 1 HETATM 13 N N9A FAD . . . F 2 -42.015 -17.127 18.451 1 26.55 ? N9A FAD 1351 B 1 HETATM 14 C C8A FAD . . . F 2 -41.15 -16.624 17.561 1 26 ? C8A FAD 1351 B 1 HETATM 15 N N7A FAD . . . F 2 -41.229 -15.277 17.611 1 26.3 ? N7A FAD 1351 B 1 HETATM 16 C C5A FAD . . . F 2 -42.149 -14.948 18.549 1 26.41 ? C5A FAD 1351 B 1 HETATM 17 C C6A FAD . . . F 2 -42.651 -13.748 19.047 1 25.84 ? C6A FAD 1351 B 1 HETATM 18 N N6A FAD . . . F 2 -42.209 -12.56 18.595 1 26.26 ? N6A FAD 1351 B 1 HETATM 19 N N1A FAD . . . F 2 -43.588 -13.767 20.008 1 25.94 ? N1A FAD 1351 B 1 HETATM 20 C C2A FAD . . . F 2 -44.037 -14.93 20.499 1 26.41 ? C2A FAD 1351 B 1 HETATM 21 N N3A FAD . . . F 2 -43.574 -16.105 20.046 1 25.9 ? N3A FAD 1351 B 1 HETATM 22 C C4A FAD . . . F 2 -42.633 -16.131 19.074 1 26.2 ? C4A FAD 1351 B 1 HETATM 23 N N1 FAD . . . F 2 -31.263 -29.858 13.49 1 19.21 ? N1 FAD 1351 B 1 HETATM 24 C C2 FAD . . . F 2 -30.579 -30.932 13.982 1 19.94 ? C2 FAD 1351 B 1 HETATM 25 O O2 FAD . . . F 2 -29.819 -30.81 14.974 1 20.17 ? O2 FAD 1351 B 1 HETATM 26 N N3 FAD . . . F 2 -30.671 -32.172 13.448 1 19.78 ? N3 FAD 1351 B 1 HETATM 27 C C4 FAD . . . F 2 -31.445 -32.434 12.38 1 19.83 ? C4 FAD 1351 B 1 HETATM 28 O O4 FAD . . . F 2 -31.499 -33.587 11.897 1 19.79 ? O4 FAD 1351 B 1 HETATM 29 C C4X FAD . . . F 2 -32.222 -31.311 11.797 1 20.09 ? C4X FAD 1351 B 1 HETATM 30 N N5 FAD . . . F 2 -33.033 -31.484 10.723 1 20.27 ? N5 FAD 1351 B 1 HETATM 31 C C5X FAD . . . F 2 -33.721 -30.428 10.225 1 20.07 ? C5X FAD 1351 B 1 HETATM 32 C C6 FAD . . . F 2 -34.548 -30.628 9.11 1 19.85 ? C6 FAD 1351 B 1 HETATM 33 C C7 FAD . . . F 2 -35.267 -29.564 8.575 1 19.79 ? C7 FAD 1351 B 1 HETATM 34 C C7M FAD . . . F 2 -36.156 -29.77 7.384 1 19.63 ? C7M FAD 1351 B 1 HETATM 35 C C8 FAD . . . F 2 -35.159 -28.305 9.162 1 20.01 ? C8 FAD 1351 B 1 HETATM 36 C C8M FAD . . . F 2 -35.939 -27.14 8.615 1 20.14 ? C8M FAD 1351 B 1 HETATM 37 C C9 FAD . . . F 2 -34.337 -28.094 10.272 1 19.72 ? C9 FAD 1351 B 1 HETATM 38 C C9A FAD . . . F 2 -33.603 -29.15 10.825 1 20.14 ? C9A FAD 1351 B 1 HETATM 39 N N10 FAD . . . F 2 -32.799 -28.936 11.91 1 20.24 ? N10 FAD 1351 B 1 HETATM 40 C C10 FAD . . . F 2 -32.083 -29.968 12.423 1 19.65 ? C10 FAD 1351 B 1 HETATM 41 C C1' FAD . . . F 2 -32.707 -27.578 12.491 1 20.52 ? C1' FAD 1351 B 1 HETATM 42 C C2' FAD . . . F 2 -33.374 -27.479 13.868 1 24.23 ? C2' FAD 1351 B 1 HETATM 43 O O2' FAD . . . F 2 -34.62 -28.179 13.82 1 25.44 ? O2' FAD 1351 B 1 HETATM 44 C C3' FAD . . . F 2 -33.649 -26.045 14.331 1 24.75 ? C3' FAD 1351 B 1 HETATM 45 O O3' FAD . . . F 2 -32.448 -25.3 14.14 1 24.82 ? O3' FAD 1351 B 1 HETATM 46 C C4' FAD . . . F 2 -34.04 -25.987 15.817 1 25.68 ? C4' FAD 1351 B 1 HETATM 47 O O4' FAD . . . F 2 -35.373 -26.478 16.031 1 24.68 ? O4' FAD 1351 B 1 HETATM 48 C C5' FAD . . . F 2 -33.875 -24.577 16.392 1 26.34 ? C5' FAD 1351 B 1 HETATM 49 O O5' FAD . . . F 2 -34.701 -24.27 17.528 1 28.33 ? O5' FAD 1351 B 1 HETATM 50 P P FAD . . . F 2 -35.717 -23.08 17.227 1 28.99 ? P FAD 1351 B 1 HETATM 51 O O1P FAD . . . F 2 -35.012 -21.75 17.274 1 27.17 ? O1P FAD 1351 B 1 HETATM 52 O O2P FAD . . . F 2 -36.32 -23.584 15.929 1 31.91 ? O2P FAD 1351 B 1 HETATM 53 O O3P FAD . . . F 2 -37.03 -23.011 18.133 1 28.42 ? O3P FAD 1351 B 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 31 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #