data_2E48 # _model_server_result.job_id NihUb-l0Rum0EsfxeLJ6Wg _model_server_result.datetime_utc '2024-11-10 18:33:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e48 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":351}' # _entry.id 2E48 # _exptl.entry_id 2E48 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2E48 _cell.length_a 149.652 _cell.length_b 181.727 _cell.length_c 50.815 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E48 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 A,B,C,D,E,F,G,H,I,J,K,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2E48 _atom_sites.fract_transf_matrix[1][1] 0.006682 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005503 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019679 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 351 351 FAD FAD . F 2 FAD B 1 1351 1351 FAD FAD . G 2 FAD C 1 2351 2351 FAD FAD . H 2 FAD D 1 3351 3351 FAD FAD . I 3 HOH A 1 352 6 HOH HOH . I 3 HOH A 2 353 10 HOH HOH . I 3 HOH A 3 354 14 HOH HOH . I 3 HOH A 4 355 15 HOH HOH . I 3 HOH A 5 356 20 HOH HOH . I 3 HOH A 6 357 23 HOH HOH . I 3 HOH A 7 358 27 HOH HOH . I 3 HOH A 8 359 35 HOH HOH . I 3 HOH A 9 360 36 HOH HOH . I 3 HOH A 10 361 38 HOH HOH . I 3 HOH A 11 362 42 HOH HOH . I 3 HOH A 12 363 44 HOH HOH . I 3 HOH A 13 364 47 HOH HOH . I 3 HOH A 14 365 50 HOH HOH . I 3 HOH A 15 366 51 HOH HOH . I 3 HOH A 16 367 52 HOH HOH . I 3 HOH A 17 368 55 HOH HOH . I 3 HOH A 18 369 61 HOH HOH . I 3 HOH A 19 370 62 HOH HOH . I 3 HOH A 20 371 66 HOH HOH . I 3 HOH A 21 372 67 HOH HOH . I 3 HOH A 22 373 73 HOH HOH . I 3 HOH A 23 374 75 HOH HOH . I 3 HOH A 24 375 77 HOH HOH . I 3 HOH A 25 376 78 HOH HOH . I 3 HOH A 26 377 83 HOH HOH . I 3 HOH A 27 378 86 HOH HOH . I 3 HOH A 28 379 95 HOH HOH . I 3 HOH A 29 380 99 HOH HOH . I 3 HOH A 30 381 100 HOH HOH . I 3 HOH A 31 382 101 HOH HOH . I 3 HOH A 32 383 103 HOH HOH . I 3 HOH A 33 384 105 HOH HOH . I 3 HOH A 34 385 110 HOH HOH . I 3 HOH A 35 386 117 HOH HOH . I 3 HOH A 36 387 121 HOH HOH . I 3 HOH A 37 388 125 HOH HOH . I 3 HOH A 38 389 131 HOH HOH . I 3 HOH A 39 390 132 HOH HOH . J 3 HOH B 1 1 1 HOH HOH . J 3 HOH B 2 2 2 HOH HOH . J 3 HOH B 3 5 5 HOH HOH . J 3 HOH B 4 13 13 HOH HOH . J 3 HOH B 5 18 18 HOH HOH . J 3 HOH B 6 19 19 HOH HOH . J 3 HOH B 7 22 22 HOH HOH . J 3 HOH B 8 25 25 HOH HOH . J 3 HOH B 9 29 29 HOH HOH . J 3 HOH B 10 33 33 HOH HOH . J 3 HOH B 11 34 34 HOH HOH . J 3 HOH B 12 39 39 HOH HOH . J 3 HOH B 13 48 48 HOH HOH . J 3 HOH B 14 49 49 HOH HOH . J 3 HOH B 15 56 56 HOH HOH . J 3 HOH B 16 63 63 HOH HOH . J 3 HOH B 17 68 68 HOH HOH . J 3 HOH B 18 81 81 HOH HOH . J 3 HOH B 19 82 82 HOH HOH . J 3 HOH B 20 84 84 HOH HOH . J 3 HOH B 21 89 89 HOH HOH . J 3 HOH B 22 92 92 HOH HOH . J 3 HOH B 23 94 94 HOH HOH . J 3 HOH B 24 96 96 HOH HOH . J 3 HOH B 25 97 97 HOH HOH . J 3 HOH B 26 102 102 HOH HOH . J 3 HOH B 27 106 106 HOH HOH . J 3 HOH B 28 109 109 HOH HOH . J 3 HOH B 29 111 111 HOH HOH . J 3 HOH B 30 115 115 HOH HOH . J 3 HOH B 31 123 123 HOH HOH . J 3 HOH B 32 127 127 HOH HOH . J 3 HOH B 33 130 130 HOH HOH . K 3 HOH C 1 7 7 HOH HOH . K 3 HOH C 2 9 9 HOH HOH . K 3 HOH C 3 11 11 HOH HOH . K 3 HOH C 4 21 21 HOH HOH . K 3 HOH C 5 24 24 HOH HOH . K 3 HOH C 6 28 28 HOH HOH . K 3 HOH C 7 30 30 HOH HOH . K 3 HOH C 8 31 31 HOH HOH . K 3 HOH C 9 32 32 HOH HOH . K 3 HOH C 10 41 41 HOH HOH . K 3 HOH C 11 43 43 HOH HOH . K 3 HOH C 12 54 54 HOH HOH . K 3 HOH C 13 57 57 HOH HOH . K 3 HOH C 14 71 71 HOH HOH . K 3 HOH C 15 74 74 HOH HOH . K 3 HOH C 16 85 85 HOH HOH . K 3 HOH C 17 87 87 HOH HOH . K 3 HOH C 18 88 88 HOH HOH . K 3 HOH C 19 91 91 HOH HOH . K 3 HOH C 20 104 104 HOH HOH . K 3 HOH C 21 107 107 HOH HOH . K 3 HOH C 22 108 108 HOH HOH . K 3 HOH C 23 112 112 HOH HOH . K 3 HOH C 24 114 114 HOH HOH . K 3 HOH C 25 122 122 HOH HOH . K 3 HOH C 26 124 124 HOH HOH . K 3 HOH C 27 134 134 HOH HOH . L 3 HOH D 1 3 3 HOH HOH . L 3 HOH D 2 4 4 HOH HOH . L 3 HOH D 3 8 8 HOH HOH . L 3 HOH D 4 12 12 HOH HOH . L 3 HOH D 5 16 16 HOH HOH . L 3 HOH D 6 17 17 HOH HOH . L 3 HOH D 7 26 26 HOH HOH . L 3 HOH D 8 37 37 HOH HOH . L 3 HOH D 9 40 40 HOH HOH . L 3 HOH D 10 45 45 HOH HOH . L 3 HOH D 11 46 46 HOH HOH . L 3 HOH D 12 53 53 HOH HOH . L 3 HOH D 13 58 58 HOH HOH . L 3 HOH D 14 59 59 HOH HOH . L 3 HOH D 15 60 60 HOH HOH . L 3 HOH D 16 64 64 HOH HOH . L 3 HOH D 17 65 65 HOH HOH . L 3 HOH D 18 69 69 HOH HOH . L 3 HOH D 19 70 70 HOH HOH . L 3 HOH D 20 72 72 HOH HOH . L 3 HOH D 21 76 76 HOH HOH . L 3 HOH D 22 79 79 HOH HOH . L 3 HOH D 23 80 80 HOH HOH . L 3 HOH D 24 90 90 HOH HOH . L 3 HOH D 25 93 93 HOH HOH . L 3 HOH D 26 98 98 HOH HOH . L 3 HOH D 27 113 113 HOH HOH . L 3 HOH D 28 116 116 HOH HOH . L 3 HOH D 29 118 118 HOH HOH . L 3 HOH D 30 119 119 HOH HOH . L 3 HOH D 31 120 120 HOH HOH . L 3 HOH D 32 126 126 HOH HOH . L 3 HOH D 33 128 128 HOH HOH . L 3 HOH D 34 129 129 HOH HOH . L 3 HOH D 35 133 133 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 -36.886 -76.504 7.979 1 29.58 ? PA FAD 351 A 1 HETATM 2 O O1A FAD . . . E 2 -37.489 -75.3 8.687 1 24.26 ? O1A FAD 351 A 1 HETATM 3 O O2A FAD . . . E 2 -36.339 -77.555 8.896 1 29.24 ? O2A FAD 351 A 1 HETATM 4 O O5B FAD . . . E 2 -37.868 -77.288 6.964 1 30.4 ? O5B FAD 351 A 1 HETATM 5 C C5B FAD . . . E 2 -38.699 -78.344 7.47 1 29.66 ? C5B FAD 351 A 1 HETATM 6 C C4B FAD . . . E 2 -39.821 -78.606 6.482 1 29.04 ? C4B FAD 351 A 1 HETATM 7 O O4B FAD . . . E 2 -39.652 -79.941 6.01 1 28.28 ? O4B FAD 351 A 1 HETATM 8 C C3B FAD . . . E 2 -41.145 -78.569 7.225 1 29.18 ? C3B FAD 351 A 1 HETATM 9 O O3B FAD . . . E 2 -42.195 -78.143 6.357 1 29.43 ? O3B FAD 351 A 1 HETATM 10 C C2B FAD . . . E 2 -41.396 -79.999 7.618 1 28.84 ? C2B FAD 351 A 1 HETATM 11 O O2B FAD . . . E 2 -42.8 -80.201 7.817 1 28.33 ? O2B FAD 351 A 1 HETATM 12 C C1B FAD . . . E 2 -40.783 -80.714 6.414 1 28.15 ? C1B FAD 351 A 1 HETATM 13 N N9A FAD . . . E 2 -40.476 -82.118 6.747 1 27.77 ? N9A FAD 351 A 1 HETATM 14 C C8A FAD . . . E 2 -39.603 -82.605 7.641 1 27.5 ? C8A FAD 351 A 1 HETATM 15 N N7A FAD . . . E 2 -39.703 -83.958 7.625 1 28.21 ? N7A FAD 351 A 1 HETATM 16 C C5A FAD . . . E 2 -40.651 -84.301 6.712 1 28.03 ? C5A FAD 351 A 1 HETATM 17 C C6A FAD . . . E 2 -41.201 -85.493 6.246 1 27.42 ? C6A FAD 351 A 1 HETATM 18 N N6A FAD . . . E 2 -40.802 -86.694 6.688 1 27.91 ? N6A FAD 351 A 1 HETATM 19 N N1A FAD . . . E 2 -42.165 -85.459 5.316 1 28.09 ? N1A FAD 351 A 1 HETATM 20 C C2A FAD . . . E 2 -42.612 -84.296 4.812 1 28.15 ? C2A FAD 351 A 1 HETATM 21 N N3A FAD . . . E 2 -42.11 -83.136 5.237 1 27.31 ? N3A FAD 351 A 1 HETATM 22 C C4A FAD . . . E 2 -41.132 -83.122 6.174 1 27.74 ? C4A FAD 351 A 1 HETATM 23 N N1 FAD . . . E 2 -30.446 -68.823 11.38 1 11.59 ? N1 FAD 351 A 1 HETATM 24 C C2 FAD . . . E 2 -29.774 -67.756 10.85 1 12.38 ? C2 FAD 351 A 1 HETATM 25 O O2 FAD . . . E 2 -29.053 -67.944 9.834 1 12.38 ? O2 FAD 351 A 1 HETATM 26 N N3 FAD . . . E 2 -29.853 -66.495 11.378 1 12.12 ? N3 FAD 351 A 1 HETATM 27 C C4 FAD . . . E 2 -30.606 -66.235 12.48 1 12.15 ? C4 FAD 351 A 1 HETATM 28 O O4 FAD . . . E 2 -30.672 -65.077 12.959 1 11.73 ? O4 FAD 351 A 1 HETATM 29 C C4X FAD . . . E 2 -31.351 -67.378 13.101 1 12.32 ? C4X FAD 351 A 1 HETATM 30 N N5 FAD . . . E 2 -32.13 -67.228 14.206 1 12.71 ? N5 FAD 351 A 1 HETATM 31 C C5X FAD . . . E 2 -32.776 -68.326 14.705 1 12.46 ? C5X FAD 351 A 1 HETATM 32 C C6 FAD . . . E 2 -33.584 -68.185 15.845 1 12.3 ? C6 FAD 351 A 1 HETATM 33 C C7 FAD . . . E 2 -34.261 -69.278 16.378 1 11.85 ? C7 FAD 351 A 1 HETATM 34 C C7M FAD . . . E 2 -35.124 -69.126 17.592 1 11.78 ? C7M FAD 351 A 1 HETATM 35 C C8 FAD . . . E 2 -34.125 -70.517 15.777 1 12.34 ? C8 FAD 351 A 1 HETATM 36 C C8M FAD . . . E 2 -34.856 -71.693 16.36 1 12.46 ? C8M FAD 351 A 1 HETATM 37 C C9 FAD . . . E 2 -33.328 -70.691 14.636 1 11.92 ? C9 FAD 351 A 1 HETATM 38 C C9A FAD . . . E 2 -32.648 -69.593 14.086 1 12.21 ? C9A FAD 351 A 1 HETATM 39 N N10 FAD . . . E 2 -31.885 -69.772 12.987 1 12.13 ? N10 FAD 351 A 1 HETATM 40 C C10 FAD . . . E 2 -31.22 -68.722 12.471 1 11.38 ? C10 FAD 351 A 1 HETATM 41 C C1' FAD . . . E 2 -31.79 -71.149 12.455 1 12.99 ? C1' FAD 351 A 1 HETATM 42 C C2' FAD . . . E 2 -32.206 -71.341 11.004 1 18.49 ? C2' FAD 351 A 1 HETATM 43 O O2' FAD . . . E 2 -33.384 -70.567 10.76 1 19.63 ? O2' FAD 351 A 1 HETATM 44 C C3' FAD . . . E 2 -32.465 -72.808 10.635 1 20.32 ? C3' FAD 351 A 1 HETATM 45 O O3' FAD . . . E 2 -31.245 -73.535 10.738 1 17.95 ? O3' FAD 351 A 1 HETATM 46 C C4' FAD . . . E 2 -32.903 -72.886 9.18 1 23.27 ? C4' FAD 351 A 1 HETATM 47 O O4' FAD . . . E 2 -34.262 -72.465 9.038 1 24.58 ? O4' FAD 351 A 1 HETATM 48 C C5' FAD . . . E 2 -32.676 -74.241 8.524 1 24.98 ? C5' FAD 351 A 1 HETATM 49 O O5' FAD . . . E 2 -33.589 -74.469 7.43 1 28.95 ? O5' FAD 351 A 1 HETATM 50 P P FAD . . . E 2 -34.387 -75.807 7.713 1 30.13 ? P FAD 351 A 1 HETATM 51 O O1P FAD . . . E 2 -33.479 -76.976 7.423 1 29.12 ? O1P FAD 351 A 1 HETATM 52 O O2P FAD . . . E 2 -34.922 -75.508 9.113 1 33.69 ? O2P FAD 351 A 1 HETATM 53 O O3P FAD . . . E 2 -35.747 -76.006 6.918 1 30.08 ? O3P FAD 351 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 53 #