data_2E4A # _model_server_result.job_id dmEKsNRmKC5JlJHwUEUbHQ _model_server_result.datetime_utc '2024-11-24 14:47:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e4a # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":2351}' # _entry.id 2E4A # _exptl.entry_id 2E4A _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2E4A _cell.length_a 151.392 _cell.length_b 185.042 _cell.length_c 51.577 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E4A _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 100 n n PA O2A FAD sing 101 n n PA O5B FAD sing 102 n n PA O3P FAD sing 103 n n O2A HOA2 FAD sing 104 n n O5B C5B FAD sing 105 n n C5B C4B FAD sing 106 n n C5B H51A FAD sing 107 n n C5B H52A FAD sing 108 n n C4B O4B FAD sing 109 n n C4B C3B FAD sing 110 n n C4B H4B FAD sing 111 n n O4B C1B FAD sing 112 n n C3B O3B FAD sing 113 n n C3B C2B FAD sing 114 n n C3B H3B FAD sing 115 n n O3B HO3A FAD sing 116 n n C2B O2B FAD sing 117 n n C2B C1B FAD sing 118 n n C2B H2B FAD sing 119 n n O2B HO2A FAD sing 120 n n C1B N9A FAD sing 121 n n C1B H1B FAD sing 122 n n N9A C8A FAD sing 123 n y N9A C4A FAD sing 124 n y C8A N7A FAD doub 125 n y C8A H8A FAD sing 126 n n N7A C5A FAD sing 127 n y C5A C6A FAD sing 128 n y C5A C4A FAD doub 129 n y C6A N6A FAD sing 130 n n C6A N1A FAD doub 131 n y N6A H61A FAD sing 132 n n N6A H62A FAD sing 133 n n N1A C2A FAD sing 134 n y C2A N3A FAD doub 135 n y C2A H2A FAD sing 136 n n N3A C4A FAD sing 137 n y N1 C2 FAD sing 138 n n N1 C10 FAD doub 139 n n C2 O2 FAD doub 140 n n C2 N3 FAD sing 141 n n N3 C4 FAD sing 142 n n N3 HN3 FAD sing 143 n n C4 O4 FAD doub 144 n n C4 C4X FAD sing 145 n n C4X N5 FAD doub 146 n n C4X C10 FAD sing 147 n n N5 C5X FAD sing 148 n n C5X C6 FAD doub 149 n y C5X C9A FAD sing 150 n y C6 C7 FAD sing 151 n y C6 H6 FAD sing 152 n n C7 C7M FAD sing 153 n n C7 C8 FAD doub 154 n y C7M HM71 FAD sing 155 n n C7M HM72 FAD sing 156 n n C7M HM73 FAD sing 157 n n C8 C8M FAD sing 158 n n C8 C9 FAD sing 159 n y C8M HM81 FAD sing 160 n n C8M HM82 FAD sing 161 n n C8M HM83 FAD sing 162 n n C9 C9A FAD doub 163 n y C9 H9 FAD sing 164 n n C9A N10 FAD sing 165 n n N10 C10 FAD sing 166 n n N10 C1' FAD sing 167 n n C1' C2' FAD sing 168 n n C1' "H1'1" FAD sing 169 n n C1' "H1'2" FAD sing 170 n n C2' O2' FAD sing 171 n n C2' C3' FAD sing 172 n n C2' H2' FAD sing 173 n n O2' HO2' FAD sing 174 n n C3' O3' FAD sing 175 n n C3' C4' FAD sing 176 n n C3' H3' FAD sing 177 n n O3' HO3' FAD sing 178 n n C4' O4' FAD sing 179 n n C4' C5' FAD sing 180 n n C4' H4' FAD sing 181 n n O4' HO4' FAD sing 182 n n C5' O5' FAD sing 183 n n C5' "H5'1" FAD sing 184 n n C5' "H5'2" FAD sing 185 n n O5' P FAD sing 186 n n P O1P FAD doub 187 n n P O2P FAD sing 188 n n P O3P FAD sing 189 n n O2P HOP2 FAD sing 190 n n # _atom_sites.entry_id 2E4A _atom_sites.fract_transf_matrix[1][1] 0.006605 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005404 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019388 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 351 351 FAD FAD . F 3 BE2 A 1 352 352 BE2 BE2 . G 2 FAD B 1 1351 1351 FAD FAD . H 3 BE2 B 1 1352 1352 BE2 BE2 . I 2 FAD C 1 2351 2351 FAD FAD . J 3 BE2 C 1 2352 2352 BE2 BE2 . K 2 FAD D 1 3351 3351 FAD FAD . L 3 BE2 D 1 3352 3352 BE2 BE2 . M 4 HOH A 1 353 1 HOH HOH . M 4 HOH A 2 354 2 HOH HOH . M 4 HOH A 3 355 6 HOH HOH . M 4 HOH A 4 356 14 HOH HOH . M 4 HOH A 5 357 16 HOH HOH . M 4 HOH A 6 358 19 HOH HOH . M 4 HOH A 7 359 20 HOH HOH . M 4 HOH A 8 360 24 HOH HOH . M 4 HOH A 9 361 26 HOH HOH . M 4 HOH A 10 362 35 HOH HOH . M 4 HOH A 11 363 38 HOH HOH . M 4 HOH A 12 364 39 HOH HOH . M 4 HOH A 13 365 40 HOH HOH . M 4 HOH A 14 366 41 HOH HOH . M 4 HOH A 15 367 44 HOH HOH . M 4 HOH A 16 368 45 HOH HOH . M 4 HOH A 17 369 48 HOH HOH . M 4 HOH A 18 370 51 HOH HOH . M 4 HOH A 19 371 53 HOH HOH . M 4 HOH A 20 372 69 HOH HOH . M 4 HOH A 21 373 70 HOH HOH . M 4 HOH A 22 374 71 HOH HOH . M 4 HOH A 23 375 72 HOH HOH . M 4 HOH A 24 376 77 HOH HOH . M 4 HOH A 25 377 79 HOH HOH . M 4 HOH A 26 378 87 HOH HOH . M 4 HOH A 27 379 88 HOH HOH . M 4 HOH A 28 380 94 HOH HOH . M 4 HOH A 29 381 95 HOH HOH . M 4 HOH A 30 382 96 HOH HOH . M 4 HOH A 31 383 103 HOH HOH . M 4 HOH A 32 384 105 HOH HOH . N 4 HOH B 1 3 3 HOH HOH . N 4 HOH B 2 4 4 HOH HOH . N 4 HOH B 3 8 8 HOH HOH . N 4 HOH B 4 10 10 HOH HOH . N 4 HOH B 5 12 12 HOH HOH . N 4 HOH B 6 13 13 HOH HOH . N 4 HOH B 7 17 17 HOH HOH . N 4 HOH B 8 18 18 HOH HOH . N 4 HOH B 9 21 21 HOH HOH . N 4 HOH B 10 25 25 HOH HOH . N 4 HOH B 11 27 27 HOH HOH . N 4 HOH B 12 28 28 HOH HOH . N 4 HOH B 13 31 31 HOH HOH . N 4 HOH B 14 32 32 HOH HOH . N 4 HOH B 15 42 42 HOH HOH . N 4 HOH B 16 47 47 HOH HOH . N 4 HOH B 17 50 50 HOH HOH . N 4 HOH B 18 52 52 HOH HOH . N 4 HOH B 19 55 55 HOH HOH . N 4 HOH B 20 56 56 HOH HOH . N 4 HOH B 21 63 63 HOH HOH . N 4 HOH B 22 64 64 HOH HOH . N 4 HOH B 23 65 65 HOH HOH . N 4 HOH B 24 66 66 HOH HOH . N 4 HOH B 25 73 73 HOH HOH . N 4 HOH B 26 74 74 HOH HOH . N 4 HOH B 27 75 75 HOH HOH . N 4 HOH B 28 83 83 HOH HOH . N 4 HOH B 29 86 86 HOH HOH . N 4 HOH B 30 89 89 HOH HOH . N 4 HOH B 31 98 98 HOH HOH . N 4 HOH B 32 100 100 HOH HOH . N 4 HOH B 33 106 106 HOH HOH . O 4 HOH C 1 9 9 HOH HOH . O 4 HOH C 2 15 15 HOH HOH . O 4 HOH C 3 22 22 HOH HOH . O 4 HOH C 4 29 29 HOH HOH . O 4 HOH C 5 30 30 HOH HOH . O 4 HOH C 6 33 33 HOH HOH . O 4 HOH C 7 46 46 HOH HOH . O 4 HOH C 8 54 54 HOH HOH . O 4 HOH C 9 57 57 HOH HOH . O 4 HOH C 10 59 59 HOH HOH . O 4 HOH C 11 62 62 HOH HOH . O 4 HOH C 12 76 76 HOH HOH . O 4 HOH C 13 78 78 HOH HOH . O 4 HOH C 14 80 80 HOH HOH . O 4 HOH C 15 82 82 HOH HOH . O 4 HOH C 16 91 91 HOH HOH . O 4 HOH C 17 97 97 HOH HOH . O 4 HOH C 18 99 99 HOH HOH . O 4 HOH C 19 104 104 HOH HOH . P 4 HOH D 1 5 5 HOH HOH . P 4 HOH D 2 7 7 HOH HOH . P 4 HOH D 3 11 11 HOH HOH . P 4 HOH D 4 23 23 HOH HOH . P 4 HOH D 5 34 34 HOH HOH . P 4 HOH D 6 36 36 HOH HOH . P 4 HOH D 7 37 37 HOH HOH . P 4 HOH D 8 43 43 HOH HOH . P 4 HOH D 9 49 49 HOH HOH . P 4 HOH D 10 58 58 HOH HOH . P 4 HOH D 11 60 60 HOH HOH . P 4 HOH D 12 61 61 HOH HOH . P 4 HOH D 13 67 67 HOH HOH . P 4 HOH D 14 68 68 HOH HOH . P 4 HOH D 15 81 81 HOH HOH . P 4 HOH D 16 84 84 HOH HOH . P 4 HOH D 17 85 85 HOH HOH . P 4 HOH D 18 90 90 HOH HOH . P 4 HOH D 19 92 92 HOH HOH . P 4 HOH D 20 93 93 HOH HOH . P 4 HOH D 21 101 101 HOH HOH . P 4 HOH D 22 102 102 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . I 2 58.559 14.523 7.764 1 38.32 ? PA FAD 2351 C 1 HETATM 2 O O1A FAD . . . I 2 58.192 15.803 8.435 1 33.86 ? O1A FAD 2351 C 1 HETATM 3 O O2A FAD . . . I 2 58.949 13.406 8.677 1 40.88 ? O2A FAD 2351 C 1 HETATM 4 O O5B FAD . . . I 2 57.382 13.886 6.874 1 38.25 ? O5B FAD 2351 C 1 HETATM 5 C C5B FAD . . . I 2 57.148 12.455 6.906 1 37.94 ? C5B FAD 2351 C 1 HETATM 6 C C4B FAD . . . I 2 55.812 12.188 6.226 1 39.66 ? C4B FAD 2351 C 1 HETATM 7 O O4B FAD . . . I 2 55.818 10.837 5.762 1 39.07 ? O4B FAD 2351 C 1 HETATM 8 C C3B FAD . . . I 2 54.632 12.35 7.173 1 40.24 ? C3B FAD 2351 C 1 HETATM 9 O O3B FAD . . . I 2 53.64 13.073 6.462 1 44.72 ? O3B FAD 2351 C 1 HETATM 10 C C2B FAD . . . I 2 54.091 10.964 7.413 1 40.27 ? C2B FAD 2351 C 1 HETATM 11 O O2B FAD . . . I 2 52.65 10.971 7.502 1 41.46 ? O2B FAD 2351 C 1 HETATM 12 C C1B FAD . . . I 2 54.609 10.201 6.193 1 37.36 ? C1B FAD 2351 C 1 HETATM 13 N N9A FAD . . . I 2 54.804 8.789 6.568 1 35.58 ? N9A FAD 2351 C 1 HETATM 14 C C8A FAD . . . I 2 55.617 8.313 7.51 1 34.88 ? C8A FAD 2351 C 1 HETATM 15 N N7A FAD . . . I 2 55.475 6.976 7.544 1 35.16 ? N7A FAD 2351 C 1 HETATM 16 C C5A FAD . . . I 2 54.553 6.632 6.624 1 35.05 ? C5A FAD 2351 C 1 HETATM 17 C C6A FAD . . . I 2 54 5.43 6.208 1 35.32 ? C6A FAD 2351 C 1 HETATM 18 N N6A FAD . . . I 2 54.391 4.27 6.781 1 35.74 ? N6A FAD 2351 C 1 HETATM 19 N N1A FAD . . . I 2 53.069 5.431 5.228 1 35.36 ? N1A FAD 2351 C 1 HETATM 20 C C2A FAD . . . I 2 52.675 6.571 4.643 1 35.15 ? C2A FAD 2351 C 1 HETATM 21 N N3A FAD . . . I 2 53.198 7.743 5.021 1 35.74 ? N3A FAD 2351 C 1 HETATM 22 C C4A FAD . . . I 2 54.131 7.79 6.012 1 35.51 ? C4A FAD 2351 C 1 HETATM 23 N N1 FAD . . . I 2 65.901 21.54 11.034 1 23.14 ? N1 FAD 2351 C 1 HETATM 24 C C2 FAD . . . I 2 66.575 22.599 10.549 1 23.07 ? C2 FAD 2351 C 1 HETATM 25 O O2 FAD . . . I 2 67.309 22.416 9.565 1 23.86 ? O2 FAD 2351 C 1 HETATM 26 N N3 FAD . . . I 2 66.489 23.841 11.08 1 23.29 ? N3 FAD 2351 C 1 HETATM 27 C C4 FAD . . . I 2 65.708 24.117 12.148 1 22.92 ? C4 FAD 2351 C 1 HETATM 28 O O4 FAD . . . I 2 65.618 25.256 12.666 1 23.03 ? O4 FAD 2351 C 1 HETATM 29 C C4X FAD . . . I 2 64.955 23.007 12.714 1 22.77 ? C4X FAD 2351 C 1 HETATM 30 N N5 FAD . . . I 2 64.172 23.191 13.784 1 23.65 ? N5 FAD 2351 C 1 HETATM 31 C C5X FAD . . . I 2 63.503 22.128 14.277 1 23.22 ? C5X FAD 2351 C 1 HETATM 32 C C6 FAD . . . I 2 62.685 22.328 15.387 1 23.16 ? C6 FAD 2351 C 1 HETATM 33 C C7 FAD . . . I 2 61.97 21.246 15.913 1 23.22 ? C7 FAD 2351 C 1 HETATM 34 C C7M FAD . . . I 2 61.078 21.439 17.116 1 22.79 ? C7M FAD 2351 C 1 HETATM 35 C C8 FAD . . . I 2 62.075 19.998 15.318 1 22.58 ? C8 FAD 2351 C 1 HETATM 36 C C8M FAD . . . I 2 61.306 18.842 15.865 1 22.96 ? C8M FAD 2351 C 1 HETATM 37 C C9 FAD . . . I 2 62.887 19.795 14.217 1 22.63 ? C9 FAD 2351 C 1 HETATM 38 C C9A FAD . . . I 2 63.607 20.856 13.674 1 22.87 ? C9A FAD 2351 C 1 HETATM 39 N N10 FAD . . . I 2 64.387 20.648 12.593 1 23.08 ? N10 FAD 2351 C 1 HETATM 40 C C10 FAD . . . I 2 65.088 21.672 12.093 1 23 ? C10 FAD 2351 C 1 HETATM 41 C C1' FAD . . . I 2 64.518 19.307 11.995 1 23.9 ? C1' FAD 2351 C 1 HETATM 42 C C2' FAD . . . I 2 63.558 19.071 10.831 1 28.64 ? C2' FAD 2351 C 1 HETATM 43 O O2' FAD . . . I 2 62.219 19.492 11.13 1 30.85 ? O2' FAD 2351 C 1 HETATM 44 C C3' FAD . . . I 2 63.464 17.602 10.457 1 29.47 ? C3' FAD 2351 C 1 HETATM 45 O O3' FAD . . . I 2 64.753 16.985 10.506 1 28.9 ? O3' FAD 2351 C 1 HETATM 46 C C4' FAD . . . I 2 62.847 17.516 9.063 1 30.42 ? C4' FAD 2351 C 1 HETATM 47 O O4' FAD . . . I 2 61.495 17.981 9.139 1 29.83 ? O4' FAD 2351 C 1 HETATM 48 C C5' FAD . . . I 2 62.893 16.118 8.471 1 31.45 ? C5' FAD 2351 C 1 HETATM 49 O O5' FAD . . . I 2 62.111 16.031 7.27 1 36.92 ? O5' FAD 2351 C 1 HETATM 50 P P FAD . . . I 2 61.226 14.714 7.255 1 38 ? P FAD 2351 C 1 HETATM 51 O O1P FAD . . . I 2 61.929 13.571 6.569 1 39.64 ? O1P FAD 2351 C 1 HETATM 52 O O2P FAD . . . I 2 60.988 14.718 8.757 1 43.4 ? O2P FAD 2351 C 1 HETATM 53 O O3P FAD . . . I 2 59.742 14.851 6.667 1 40.33 ? O3P FAD 2351 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 63 _model_server_stats.query_time_ms 469 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 53 #