data_2E4P # _model_server_result.job_id 0FiGn8gWuu78bP7fVg_wtg _model_server_result.datetime_utc '2024-11-07 18:57:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e4p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1001}' # _entry.id 2E4P # _exptl.entry_id 2E4P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.82 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE2/S2 (INORGANIC) CLUSTER' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2E4P _cell.length_a 26.294 _cell.length_b 144.113 _cell.length_c 61.176 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E4P _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.comp_id_2 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O1 _pdbx_entity_branch_link.leaving_atom_id_2 HO1 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n C GLC 1 C 1 GLC T 1 TRE 2 n C GLC 2 C 2 GLC T 1 TRE # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 83 A CYS 83 1_555 B SG CYS 83 B CYS 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? covale ? covale1 C C1 GLC . C GLC 1 1_555 C O1 GLC . C GLC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 sing metalc ? metalc1 A SG CYS 43 A CYS 43 1_555 D FE1 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc2 A ND1 HIS 45 A HIS 45 1_555 D FE2 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc3 A SG CYS 63 A CYS 63 1_555 D FE1 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc4 A ND1 HIS 66 A HIS 66 1_555 D FE2 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? metalc ? metalc5 B SG CYS 43 B CYS 43 1_555 F FE1 FES . B FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc6 B ND1 HIS 45 B HIS 45 1_555 F FE2 FES . B FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc7 B SG CYS 63 B CYS 63 1_555 F FE1 FES . B FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc8 B ND1 HIS 66 B HIS 66 1_555 F FE2 FES . B FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? # _chem_comp.formula 'Fe2 S2' _chem_comp.formula_weight 175.82 _chem_comp.id FES _chem_comp.mon_nstd_flag . _chem_comp.name 'FE2/S2 (INORGANIC) CLUSTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag FE1 S1 FES sing 83 n n FE1 S2 FES sing 84 n n FE2 S1 FES sing 85 n n FE2 S2 FES sing 86 n n # _atom_sites.entry_id 2E4P _atom_sites.fract_transf_matrix[1][1] 0.038031 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016346 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 FES A 1 1001 1001 FES FES . E 4 SO4 A 1 2001 1 SO4 SO4 . F 3 FES B 1 1001 1001 FES FES . G 5 HOH A 1 2003 3 HOH HOH . G 5 HOH A 2 2004 5 HOH HOH . G 5 HOH A 3 2005 11 HOH HOH . G 5 HOH A 4 2006 16 HOH HOH . G 5 HOH A 5 2007 19 HOH HOH . G 5 HOH A 6 2008 24 HOH HOH . G 5 HOH A 7 2009 26 HOH HOH . G 5 HOH A 8 2010 28 HOH HOH . G 5 HOH A 9 2011 31 HOH HOH . G 5 HOH A 10 2012 33 HOH HOH . G 5 HOH A 11 2013 35 HOH HOH . G 5 HOH A 12 2014 42 HOH HOH . G 5 HOH A 13 2015 43 HOH HOH . G 5 HOH A 14 2016 45 HOH HOH . G 5 HOH A 15 2017 48 HOH HOH . G 5 HOH A 16 2018 50 HOH HOH . G 5 HOH A 17 2019 51 HOH HOH . G 5 HOH A 18 2020 54 HOH HOH . G 5 HOH A 19 2021 55 HOH HOH . G 5 HOH A 20 2022 56 HOH HOH . G 5 HOH A 21 2023 58 HOH HOH . G 5 HOH A 22 2024 59 HOH HOH . G 5 HOH A 23 2025 60 HOH HOH . G 5 HOH A 24 2026 62 HOH HOH . G 5 HOH A 25 2027 65 HOH HOH . G 5 HOH A 26 2028 66 HOH HOH . G 5 HOH A 27 2029 68 HOH HOH . G 5 HOH A 28 2030 69 HOH HOH . G 5 HOH A 29 2031 70 HOH HOH . G 5 HOH A 30 2032 71 HOH HOH . G 5 HOH A 31 2033 73 HOH HOH . G 5 HOH A 32 2034 76 HOH HOH . G 5 HOH A 33 2035 77 HOH HOH . G 5 HOH A 34 2036 79 HOH HOH . G 5 HOH A 35 2037 82 HOH HOH . G 5 HOH A 36 2038 84 HOH HOH . G 5 HOH A 37 2039 86 HOH HOH . G 5 HOH A 38 2040 87 HOH HOH . G 5 HOH A 39 2041 88 HOH HOH . G 5 HOH A 40 2042 90 HOH HOH . G 5 HOH A 41 2043 91 HOH HOH . G 5 HOH A 42 2044 92 HOH HOH . G 5 HOH A 43 2045 95 HOH HOH . G 5 HOH A 44 2046 98 HOH HOH . G 5 HOH A 45 2047 99 HOH HOH . G 5 HOH A 46 2048 101 HOH HOH . G 5 HOH A 47 2049 103 HOH HOH . G 5 HOH A 48 2050 105 HOH HOH . G 5 HOH A 49 2051 106 HOH HOH . G 5 HOH A 50 2052 107 HOH HOH . G 5 HOH A 51 2053 111 HOH HOH . G 5 HOH A 52 2054 112 HOH HOH . G 5 HOH A 53 2055 114 HOH HOH . G 5 HOH A 54 2056 116 HOH HOH . G 5 HOH A 55 2057 118 HOH HOH . G 5 HOH A 56 2058 119 HOH HOH . G 5 HOH A 57 2059 121 HOH HOH . G 5 HOH A 58 2060 122 HOH HOH . G 5 HOH A 59 2061 123 HOH HOH . G 5 HOH A 60 2062 124 HOH HOH . G 5 HOH A 61 2063 127 HOH HOH . G 5 HOH A 62 2064 128 HOH HOH . G 5 HOH A 63 2065 130 HOH HOH . G 5 HOH A 64 2066 131 HOH HOH . G 5 HOH A 65 2067 132 HOH HOH . G 5 HOH A 66 2068 136 HOH HOH . G 5 HOH A 67 2069 138 HOH HOH . G 5 HOH A 68 2070 140 HOH HOH . G 5 HOH A 69 2071 142 HOH HOH . G 5 HOH A 70 2072 143 HOH HOH . G 5 HOH A 71 2073 145 HOH HOH . G 5 HOH A 72 2074 146 HOH HOH . G 5 HOH A 73 2075 147 HOH HOH . G 5 HOH A 74 2076 148 HOH HOH . G 5 HOH A 75 2077 150 HOH HOH . G 5 HOH A 76 2078 151 HOH HOH . G 5 HOH A 77 2079 153 HOH HOH . G 5 HOH A 78 2080 154 HOH HOH . G 5 HOH A 79 2081 155 HOH HOH . G 5 HOH A 80 2082 156 HOH HOH . G 5 HOH A 81 2083 159 HOH HOH . G 5 HOH A 82 2084 162 HOH HOH . H 5 HOH B 1 1002 2 HOH HOH . H 5 HOH B 2 1003 6 HOH HOH . H 5 HOH B 3 1004 9 HOH HOH . H 5 HOH B 4 1005 13 HOH HOH . H 5 HOH B 5 1006 27 HOH HOH . H 5 HOH B 6 1007 29 HOH HOH . H 5 HOH B 7 1008 32 HOH HOH . H 5 HOH B 8 1009 37 HOH HOH . H 5 HOH B 9 1010 38 HOH HOH . H 5 HOH B 10 1011 39 HOH HOH . H 5 HOH B 11 1012 41 HOH HOH . H 5 HOH B 12 1013 44 HOH HOH . H 5 HOH B 13 1014 46 HOH HOH . H 5 HOH B 14 1015 47 HOH HOH . H 5 HOH B 15 1016 49 HOH HOH . H 5 HOH B 16 1017 57 HOH HOH . H 5 HOH B 17 1018 61 HOH HOH . H 5 HOH B 18 1019 63 HOH HOH . H 5 HOH B 19 1020 64 HOH HOH . H 5 HOH B 20 1021 67 HOH HOH . H 5 HOH B 21 1022 72 HOH HOH . H 5 HOH B 22 1023 74 HOH HOH . H 5 HOH B 23 1024 75 HOH HOH . H 5 HOH B 24 1025 78 HOH HOH . H 5 HOH B 25 1026 80 HOH HOH . H 5 HOH B 26 1027 81 HOH HOH . H 5 HOH B 27 1028 83 HOH HOH . H 5 HOH B 28 1029 89 HOH HOH . H 5 HOH B 29 1030 93 HOH HOH . H 5 HOH B 30 1031 96 HOH HOH . H 5 HOH B 31 1032 97 HOH HOH . H 5 HOH B 32 1033 102 HOH HOH . H 5 HOH B 33 1034 108 HOH HOH . H 5 HOH B 34 1035 109 HOH HOH . H 5 HOH B 35 1036 110 HOH HOH . H 5 HOH B 36 1037 113 HOH HOH . H 5 HOH B 37 1038 115 HOH HOH . H 5 HOH B 38 1039 117 HOH HOH . H 5 HOH B 39 1040 120 HOH HOH . H 5 HOH B 40 1041 125 HOH HOH . H 5 HOH B 41 1042 126 HOH HOH . H 5 HOH B 42 1043 129 HOH HOH . H 5 HOH B 43 1044 133 HOH HOH . H 5 HOH B 44 1045 134 HOH HOH . H 5 HOH B 45 1046 135 HOH HOH . H 5 HOH B 46 1047 137 HOH HOH . H 5 HOH B 47 1048 139 HOH HOH . H 5 HOH B 48 1049 141 HOH HOH . H 5 HOH B 49 1050 144 HOH HOH . H 5 HOH B 50 1051 149 HOH HOH . H 5 HOH B 51 1052 152 HOH HOH . H 5 HOH B 52 1053 157 HOH HOH . H 5 HOH B 53 1054 158 HOH HOH . H 5 HOH B 54 1055 160 HOH HOH . H 5 HOH B 55 1056 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 FE FE1 FES . . . D 3 -14.824 20.355 -20.411 1 13.05 ? FE1 FES 1001 A 1 HETATM 2 FE FE2 FES . . . D 3 -16.299 21.942 -22.118 1 16.7 ? FE2 FES 1001 A 1 HETATM 3 S S1 FES . . . D 3 -16.327 21.871 -19.962 1 15.35 ? S1 FES 1001 A 1 HETATM 4 S S2 FES . . . D 3 -14.913 20.315 -22.59 1 16.07 ? S2 FES 1001 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #