data_2E4Q
#
_model_server_result.job_id            bgqt7N3FimE7Biq-aiyd-g 
_model_server_result.datetime_utc      '2024-11-07 18:39:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2e4q 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1001}' 
#
_entry.id    2E4Q 
#
_exptl.entry_id    2E4Q 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.82 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE2/S2 (INORGANIC) CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2E4Q 
_cell.length_a            49.71 
_cell.length_b            49.71 
_cell.length_c            172.065 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2E4Q 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 43 A CYS 43 1_555 C FE1 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? 
metalc ? metalc2 A ND1 HIS 45 A HIS 45 1_555 C FE2 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? 
metalc ? metalc3 A SG CYS 63 A CYS 63 1_555 C FE1 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc4 A ND1 HIS 66 A HIS 66 1_555 C FE2 FES . A FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? 
metalc ? metalc5 B SG CYS 43 C CYS 43 1_555 D FE1 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? 
metalc ? metalc6 B ND1 HIS 45 C HIS 45 1_555 D FE2 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.129 ? 
metalc ? metalc7 B SG CYS 63 C CYS 63 1_555 D FE1 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc8 B ND1 HIS 66 C HIS 66 1_555 D FE2 FES . C FES 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? 
#
_chem_comp.formula           'Fe2 S2' 
_chem_comp.formula_weight    175.82 
_chem_comp.id                FES 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE2/S2 (INORGANIC) CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S1 FES sing 83 n n 
FE1 S2 FES sing 84 n n 
FE2 S1 FES sing 85 n n 
FE2 S2 FES sing 86 n n 
#
_atom_sites.entry_id                     2E4Q 
_atom_sites.fract_transf_matrix[1][1]    0.020117 
_atom_sites.fract_transf_matrix[1][2]    0.011614 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.023229 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005812 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FES A 1 1001 1001 FES FES . 
D 2 FES C 1 1001 1001 FES FES . 
E 3 HOH A 1 1002 2 HOH HOH . 
E 3 HOH A 2 1003 4 HOH HOH . 
E 3 HOH A 3 1004 7 HOH HOH . 
E 3 HOH A 4 1005 8 HOH HOH . 
E 3 HOH A 5 1006 9 HOH HOH . 
E 3 HOH A 6 1007 13 HOH HOH . 
E 3 HOH A 7 1008 14 HOH HOH . 
E 3 HOH A 8 1009 15 HOH HOH . 
E 3 HOH A 9 1010 17 HOH HOH . 
E 3 HOH A 10 1011 20 HOH HOH . 
E 3 HOH A 11 1012 21 HOH HOH . 
E 3 HOH A 12 1013 22 HOH HOH . 
E 3 HOH A 13 1014 25 HOH HOH . 
E 3 HOH A 14 1015 29 HOH HOH . 
E 3 HOH A 15 1016 30 HOH HOH . 
E 3 HOH A 16 1017 31 HOH HOH . 
E 3 HOH A 17 1018 32 HOH HOH . 
E 3 HOH A 18 1019 33 HOH HOH . 
E 3 HOH A 19 1020 34 HOH HOH . 
E 3 HOH A 20 1021 35 HOH HOH . 
E 3 HOH A 21 1022 36 HOH HOH . 
E 3 HOH A 22 1023 37 HOH HOH . 
E 3 HOH A 23 1024 38 HOH HOH . 
E 3 HOH A 24 1025 39 HOH HOH . 
E 3 HOH A 25 1026 40 HOH HOH . 
E 3 HOH A 26 1027 42 HOH HOH . 
E 3 HOH A 27 1028 43 HOH HOH . 
E 3 HOH A 28 1029 46 HOH HOH . 
E 3 HOH A 29 1030 49 HOH HOH . 
E 3 HOH A 30 1031 50 HOH HOH . 
E 3 HOH A 31 1032 51 HOH HOH . 
E 3 HOH A 32 1033 52 HOH HOH . 
E 3 HOH A 33 1034 53 HOH HOH . 
E 3 HOH A 34 1035 55 HOH HOH . 
E 3 HOH A 35 1036 56 HOH HOH . 
E 3 HOH A 36 1037 57 HOH HOH . 
E 3 HOH A 37 1038 58 HOH HOH . 
E 3 HOH A 38 1039 59 HOH HOH . 
E 3 HOH A 39 1040 61 HOH HOH . 
E 3 HOH A 40 1041 62 HOH HOH . 
E 3 HOH A 41 1042 63 HOH HOH . 
E 3 HOH A 42 1043 64 HOH HOH . 
E 3 HOH A 43 1044 67 HOH HOH . 
E 3 HOH A 44 1045 70 HOH HOH . 
E 3 HOH A 45 1046 73 HOH HOH . 
E 3 HOH A 46 1047 74 HOH HOH . 
E 3 HOH A 47 1048 75 HOH HOH . 
E 3 HOH A 48 1049 76 HOH HOH . 
E 3 HOH A 49 1050 79 HOH HOH . 
E 3 HOH A 50 1051 80 HOH HOH . 
E 3 HOH A 51 1052 81 HOH HOH . 
E 3 HOH A 52 1053 85 HOH HOH . 
E 3 HOH A 53 1054 88 HOH HOH . 
E 3 HOH A 54 1055 89 HOH HOH . 
E 3 HOH A 55 1056 94 HOH HOH . 
E 3 HOH A 56 1057 96 HOH HOH . 
E 3 HOH A 57 1058 98 HOH HOH . 
E 3 HOH A 58 1059 99 HOH HOH . 
E 3 HOH A 59 1060 100 HOH HOH . 
E 3 HOH A 60 1061 104 HOH HOH . 
E 3 HOH A 61 1062 109 HOH HOH . 
E 3 HOH A 62 1063 110 HOH HOH . 
E 3 HOH A 63 1064 112 HOH HOH . 
E 3 HOH A 64 1065 116 HOH HOH . 
E 3 HOH A 65 1066 118 HOH HOH . 
E 3 HOH A 66 1067 119 HOH HOH . 
E 3 HOH A 67 1068 120 HOH HOH . 
E 3 HOH A 68 1069 121 HOH HOH . 
E 3 HOH A 69 1070 122 HOH HOH . 
E 3 HOH A 70 1071 125 HOH HOH . 
E 3 HOH A 71 1072 126 HOH HOH . 
E 3 HOH A 72 1073 131 HOH HOH . 
E 3 HOH A 73 1074 132 HOH HOH . 
E 3 HOH A 74 1075 134 HOH HOH . 
E 3 HOH A 75 1076 136 HOH HOH . 
E 3 HOH A 76 1077 138 HOH HOH . 
E 3 HOH A 77 1078 139 HOH HOH . 
E 3 HOH A 78 1079 146 HOH HOH . 
E 3 HOH A 79 1080 148 HOH HOH . 
E 3 HOH A 80 1081 154 HOH HOH . 
F 3 HOH C 1 1002 1 HOH HOH . 
F 3 HOH C 2 1003 3 HOH HOH . 
F 3 HOH C 3 1004 5 HOH HOH . 
F 3 HOH C 4 1005 6 HOH HOH . 
F 3 HOH C 5 1006 10 HOH HOH . 
F 3 HOH C 6 1007 11 HOH HOH . 
F 3 HOH C 7 1008 12 HOH HOH . 
F 3 HOH C 8 1009 16 HOH HOH . 
F 3 HOH C 9 1010 18 HOH HOH . 
F 3 HOH C 10 1011 19 HOH HOH . 
F 3 HOH C 11 1012 23 HOH HOH . 
F 3 HOH C 12 1013 24 HOH HOH . 
F 3 HOH C 13 1014 26 HOH HOH . 
F 3 HOH C 14 1015 27 HOH HOH . 
F 3 HOH C 15 1016 28 HOH HOH . 
F 3 HOH C 16 1017 44 HOH HOH . 
F 3 HOH C 17 1018 45 HOH HOH . 
F 3 HOH C 18 1019 47 HOH HOH . 
F 3 HOH C 19 1020 60 HOH HOH . 
F 3 HOH C 20 1021 65 HOH HOH . 
F 3 HOH C 21 1022 68 HOH HOH . 
F 3 HOH C 22 1023 71 HOH HOH . 
F 3 HOH C 23 1024 72 HOH HOH . 
F 3 HOH C 24 1025 77 HOH HOH . 
F 3 HOH C 25 1026 78 HOH HOH . 
F 3 HOH C 26 1027 82 HOH HOH . 
F 3 HOH C 27 1028 83 HOH HOH . 
F 3 HOH C 28 1029 84 HOH HOH . 
F 3 HOH C 29 1030 86 HOH HOH . 
F 3 HOH C 30 1031 91 HOH HOH . 
F 3 HOH C 31 1032 92 HOH HOH . 
F 3 HOH C 32 1033 93 HOH HOH . 
F 3 HOH C 33 1034 97 HOH HOH . 
F 3 HOH C 34 1035 101 HOH HOH . 
F 3 HOH C 35 1036 103 HOH HOH . 
F 3 HOH C 36 1037 105 HOH HOH . 
F 3 HOH C 37 1038 106 HOH HOH . 
F 3 HOH C 38 1039 108 HOH HOH . 
F 3 HOH C 39 1040 111 HOH HOH . 
F 3 HOH C 40 1041 113 HOH HOH . 
F 3 HOH C 41 1042 114 HOH HOH . 
F 3 HOH C 42 1043 117 HOH HOH . 
F 3 HOH C 43 1044 123 HOH HOH . 
F 3 HOH C 44 1045 124 HOH HOH . 
F 3 HOH C 45 1046 127 HOH HOH . 
F 3 HOH C 46 1047 128 HOH HOH . 
F 3 HOH C 47 1048 129 HOH HOH . 
F 3 HOH C 48 1049 130 HOH HOH . 
F 3 HOH C 49 1050 133 HOH HOH . 
F 3 HOH C 50 1051 141 HOH HOH . 
F 3 HOH C 51 1052 142 HOH HOH . 
F 3 HOH C 52 1053 145 HOH HOH . 
F 3 HOH C 53 1054 147 HOH HOH . 
F 3 HOH C 54 1055 151 HOH HOH . 
F 3 HOH C 55 1056 152 HOH HOH . 
F 3 HOH C 56 1057 153 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 FES . . . D 2 -68.88 19.012 -15.739 1 19.99 ? FE1 FES 1001 C 1 
HETATM 2 FE FE2 FES . . . D 2 -70.927 19.722 -17.354 1 22.29 ? FE2 FES 1001 C 1 
HETATM 3 S S1 FES . . . D 2 -70.781 19.967 -15.156 1 20.96 ? S1 FES 1001 C 1 
HETATM 4 S S2 FES . . . D 2 -69.079 18.644 -17.905 1 21.62 ? S2 FES 1001 C 1 
#
_model_server_stats.io_time_ms              58 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           331 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#