data_2E74 # _model_server_result.job_id y0veqeVbnB_erFzGhEzULg _model_server_result.datetime_utc '2024-11-15 01:42:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":101}' # _entry.id 2E74 # _exptl.entry_id 2E74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 536.873 _entity.id 16 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-CAROTENE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2E74 _cell.length_a 158.343 _cell.length_b 158.343 _cell.length_c 361.094 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -79.1715 137.129061 60.182333 # _struct_asym.details ? _struct_asym.entity_id 16 _struct_asym.id W _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 108 D CYS 108 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf2 D SG CYS 113 D CYS 113 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc1 J FE HEM . A HEM 301 1_555 A NE2 HIS 86 A HIS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc2 J FE HEM . A HEM 301 1_555 A NE2 HIS 187 A HIS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc3 K FE HEM . A HEM 302 1_555 A NE2 HIS 100 A HIS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc4 K FE HEM . A HEM 302 1_555 A NE2 HIS 202 A HIS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? covale ? covale1 L CAB HEM . A HEM 303 1_555 A SG CYS 35 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 T FE HEM . C HEM 301 1_555 C N TYR 1 C TYR 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc6 T FE HEM . C HEM 301 1_555 C NE2 HIS 26 C HIS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? covale ? covale2 T CAC HEM . C HEM 301 1_555 C SG CYS 25 C CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc7 U FE1 FES . D FES 200 1_555 D SG CYS 108 D CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? metalc ? metalc8 U FE2 FES . D FES 200 1_555 D ND1 HIS 110 D HIS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc9 U FE1 FES . D FES 200 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc10 U FE2 FES . D FES 200 1_555 D ND1 HIS 129 D HIS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? # _chem_comp.formula 'C40 H56' _chem_comp.formula_weight 536.873 _chem_comp.id BCR _chem_comp.mon_nstd_flag . _chem_comp.name BETA-CAROTENE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2E74 _atom_sites.fract_transf_matrix[1][1] 0.006315 _atom_sites.fract_transf_matrix[1][2] 0.003646 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007292 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002769 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 CD A 1 1001 1001 CD CD . J 10 HEM A 1 301 301 HEM HEM . K 10 HEM A 1 302 302 HEM HEM . L 10 HEM A 1 303 303 HEM HEM . M 11 UMQ A 1 1101 1101 UMQ UMQ . N 11 UMQ A 1 1102 1102 UMQ UMQ . O 11 UMQ A 1 1103 1103 UMQ UMQ . P 11 UMQ A 1 1104 1104 UMQ UMQ . Q 9 CD B 1 161 4 CD CD . R 12 CLA B 1 201 201 CLA CLA . S 13 OPC B 1 202 1 OPC OPC . T 10 HEM C 1 301 301 HEM HEM . U 14 FES D 1 200 200 FES FES . V 15 SQD D 1 201 11 SQD SQD . W 16 BCR G 1 101 101 BCR BCR . X 13 OPC H 1 1002 1002 OPC OPC . Y 17 HOH A 1 1105 2 HOH HOH . Y 17 HOH A 2 1106 401 HOH HOH . Z 17 HOH B 1 211 211 HOH HOH . Z 17 HOH B 2 212 212 HOH HOH . AA 17 HOH C 1 302 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BCR . . . W 16 -36.698 80.789 4.228 1 42.2 ? C1 BCR 101 G 1 HETATM 2 C C2 BCR . . . W 16 -37.277 81.785 5.25 1 38.82 ? C2 BCR 101 G 1 HETATM 3 C C3 BCR . . . W 16 -38.816 81.837 5.135 1 33.71 ? C3 BCR 101 G 1 HETATM 4 C C4 BCR . . . W 16 -39.375 80.445 5.432 1 33.33 ? C4 BCR 101 G 1 HETATM 5 C C5 BCR . . . W 16 -38.828 79.514 4.417 1 34.35 ? C5 BCR 101 G 1 HETATM 6 C C6 BCR . . . W 16 -37.532 79.508 4.06 1 51.95 ? C6 BCR 101 G 1 HETATM 7 C C7 BCR . . . W 16 -37.04 78.514 3.433 1 37.32 ? C7 BCR 101 G 1 HETATM 8 C C8 BCR . . . W 16 -36.689 77.591 2.766 1 63.73 ? C8 BCR 101 G 1 HETATM 9 C C9 BCR . . . W 16 -36.531 76.573 2.035 1 67.04 ? C9 BCR 101 G 1 HETATM 10 C C10 BCR . . . W 16 -35.875 76.535 0.843 1 69.97 ? C10 BCR 101 G 1 HETATM 11 C C11 BCR . . . W 16 -35.223 77.501 0.174 1 69.56 ? C11 BCR 101 G 1 HETATM 12 C C33 BCR . . . W 16 -39.824 78.686 3.709 1 50.65 ? C33 BCR 101 G 1 HETATM 13 C C31 BCR . . . W 16 -35.25 80.476 4.538 1 36.75 ? C31 BCR 101 G 1 HETATM 14 C C32 BCR . . . W 16 -36.704 81.444 2.853 1 79.13 ? C32 BCR 101 G 1 HETATM 15 C C34 BCR . . . W 16 -37.161 75.29 2.509 1 63.16 ? C34 BCR 101 G 1 HETATM 16 C C12 BCR . . . W 16 -34.655 77.156 -0.998 1 69.18 ? C12 BCR 101 G 1 HETATM 17 C C13 BCR . . . W 16 -33.961 77.955 -1.847 1 65.98 ? C13 BCR 101 G 1 HETATM 18 C C14 BCR . . . W 16 -33.483 77.415 -3 1 70.2 ? C14 BCR 101 G 1 HETATM 19 C C15 BCR . . . W 16 -32.774 78.087 -3.934 1 71.35 ? C15 BCR 101 G 1 HETATM 20 C C16 BCR . . . W 16 -32.299 77.496 -5.063 1 71.23 ? C16 BCR 101 G 1 HETATM 21 C C17 BCR . . . W 16 -31.589 78.178 -5.995 1 70.47 ? C17 BCR 101 G 1 HETATM 22 C C18 BCR . . . W 16 -31.094 77.659 -7.158 1 70.73 ? C18 BCR 101 G 1 HETATM 23 C C19 BCR . . . W 16 -30.399 78.453 -8.014 1 68.03 ? C19 BCR 101 G 1 HETATM 24 C C20 BCR . . . W 16 -29.89 77.948 -9.162 1 72.83 ? C20 BCR 101 G 1 HETATM 25 C C21 BCR . . . W 16 -29.18 78.695 -10.055 1 75.47 ? C21 BCR 101 G 1 HETATM 26 C C22 BCR . . . W 16 -28.636 78.275 -11.258 1 76.27 ? C22 BCR 101 G 1 HETATM 27 C C23 BCR . . . W 16 -27.997 79.099 -11.987 1 74 ? C23 BCR 101 G 1 HETATM 28 C C24 BCR . . . W 16 -27.371 79.905 -12.604 1 113.97 ? C24 BCR 101 G 1 HETATM 29 C C25 BCR . . . W 16 -26.72 80.835 -13.175 1 129.35 ? C25 BCR 101 G 1 HETATM 30 C C26 BCR . . . W 16 -27.062 82.104 -12.836 1 131.45 ? C26 BCR 101 G 1 HETATM 31 C C27 BCR . . . W 16 -26.093 83.264 -13.008 1 135.1 ? C27 BCR 101 G 1 HETATM 32 C C28 BCR . . . W 16 -24.774 82.829 -13.653 1 136.01 ? C28 BCR 101 G 1 HETATM 33 C C29 BCR . . . W 16 -24.995 81.785 -14.745 1 129.7 ? C29 BCR 101 G 1 HETATM 34 C C30 BCR . . . W 16 -25.589 80.504 -14.168 1 130.68 ? C30 BCR 101 G 1 HETATM 35 C C35 BCR . . . W 16 -33.745 79.397 -1.525 1 61.17 ? C35 BCR 101 G 1 HETATM 36 C C36 BCR . . . W 16 -31.291 76.21 -7.533 1 65.71 ? C36 BCR 101 G 1 HETATM 37 C C37 BCR . . . W 16 -28.746 76.853 -11.762 1 71.08 ? C37 BCR 101 G 1 HETATM 38 C C38 BCR . . . W 16 -28.431 82.394 -12.251 1 105.14 ? C38 BCR 101 G 1 HETATM 39 C C39 BCR . . . W 16 -24.473 79.719 -13.473 1 117.03 ? C39 BCR 101 G 1 HETATM 40 C C40 BCR . . . W 16 -26.116 79.671 -15.34 1 122.11 ? C40 BCR 101 G 1 # _model_server_stats.io_time_ms 36 _model_server_stats.parse_time_ms 49 _model_server_stats.create_model_time_ms 83 _model_server_stats.query_time_ms 1507 _model_server_stats.encode_time_ms 29 _model_server_stats.element_count 40 #