data_2E74 # _model_server_result.job_id wnip25ivkwHNVyndViN9Ag _model_server_result.datetime_utc '2024-11-15 01:40:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":1101}' # _entry.id 2E74 # _exptl.entry_id 2E74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.589 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECYL-MALTOSIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2E74 _cell.length_a 158.343 _cell.length_b 158.343 _cell.length_c 361.094 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -79.1715 137.129061 60.182333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 M N N ? 11 N N N ? 11 O N N ? 11 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 108 D CYS 108 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf2 D SG CYS 113 D CYS 113 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc1 J FE HEM . A HEM 301 1_555 A NE2 HIS 86 A HIS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc2 J FE HEM . A HEM 301 1_555 A NE2 HIS 187 A HIS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc3 K FE HEM . A HEM 302 1_555 A NE2 HIS 100 A HIS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc4 K FE HEM . A HEM 302 1_555 A NE2 HIS 202 A HIS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? covale ? covale1 L CAB HEM . A HEM 303 1_555 A SG CYS 35 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 T FE HEM . C HEM 301 1_555 C N TYR 1 C TYR 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc6 T FE HEM . C HEM 301 1_555 C NE2 HIS 26 C HIS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? covale ? covale2 T CAC HEM . C HEM 301 1_555 C SG CYS 25 C CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc7 U FE1 FES . D FES 200 1_555 D SG CYS 108 D CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? metalc ? metalc8 U FE2 FES . D FES 200 1_555 D ND1 HIS 110 D HIS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc9 U FE1 FES . D FES 200 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc10 U FE2 FES . D FES 200 1_555 D ND1 HIS 129 D HIS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? # _chem_comp.formula 'C23 H44 O11' _chem_comp.formula_weight 496.589 _chem_comp.id UMQ _chem_comp.mon_nstd_flag . _chem_comp.name UNDECYL-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UNDECYL-BETA-D-MALTOPYRANOSIDE # _atom_sites.entry_id 2E74 _atom_sites.fract_transf_matrix[1][1] 0.006315 _atom_sites.fract_transf_matrix[1][2] 0.003646 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007292 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002769 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 CD A 1 1001 1001 CD CD . J 10 HEM A 1 301 301 HEM HEM . K 10 HEM A 1 302 302 HEM HEM . L 10 HEM A 1 303 303 HEM HEM . M 11 UMQ A 1 1101 1101 UMQ UMQ . N 11 UMQ A 1 1102 1102 UMQ UMQ . O 11 UMQ A 1 1103 1103 UMQ UMQ . P 11 UMQ A 1 1104 1104 UMQ UMQ . Q 9 CD B 1 161 4 CD CD . R 12 CLA B 1 201 201 CLA CLA . S 13 OPC B 1 202 1 OPC OPC . T 10 HEM C 1 301 301 HEM HEM . U 14 FES D 1 200 200 FES FES . V 15 SQD D 1 201 11 SQD SQD . W 16 BCR G 1 101 101 BCR BCR . X 13 OPC H 1 1002 1002 OPC OPC . Y 17 HOH A 1 1105 2 HOH HOH . Y 17 HOH A 2 1106 401 HOH HOH . Z 17 HOH B 1 211 211 HOH HOH . Z 17 HOH B 2 212 212 HOH HOH . AA 17 HOH C 1 302 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 UMQ . . . M 11 -68.011 78.908 17.153 1 146.62 ? C2 UMQ 1101 A 1 HETATM 2 C C4 UMQ . . . M 11 -66.582 77.173 18.261 1 143.37 ? C4 UMQ 1101 A 1 HETATM 3 C C5 UMQ . . . M 11 -65.693 77.225 17.009 1 137.95 ? C5 UMQ 1101 A 1 HETATM 4 C C6 UMQ . . . M 11 -64.874 75.965 16.723 1 111.65 ? C6 UMQ 1101 A 1 HETATM 5 O O2 UMQ . . . M 11 -68.593 80.214 17.239 1 146.78 ? O2 UMQ 1101 A 1 HETATM 6 O O4 UMQ . . . M 11 -65.825 76.835 19.432 1 139.31 ? O4 UMQ 1101 A 1 HETATM 7 C C1 UMQ . . . M 11 -67.047 78.858 15.973 1 145.37 ? C1 UMQ 1101 A 1 HETATM 8 C C3 UMQ . . . M 11 -67.262 78.536 18.436 1 145.26 ? C3 UMQ 1101 A 1 HETATM 9 O O1 UMQ . . . M 11 -65.953 79.752 16.2 1 147.16 ? O1 UMQ 1101 A 1 HETATM 10 O O3 UMQ . . . M 11 -68.148 78.539 19.563 1 139.49 ? O3 UMQ 1101 A 1 HETATM 11 O O5 UMQ . . . M 11 -66.524 77.534 15.878 1 149.31 ? O5 UMQ 1101 A 1 HETATM 12 O O6 UMQ . . . M 11 -64.87 75.735 15.304 1 74.49 ? O6 UMQ 1101 A 1 HETATM 13 C C1' UMQ . . . M 11 -64.002 81.877 13.22 1 109.07 ? C1' UMQ 1101 A 1 HETATM 14 C C2' UMQ . . . M 11 -65.249 82.254 13.556 1 113.58 ? C2' UMQ 1101 A 1 HETATM 15 C C3' UMQ . . . M 11 -65.892 81.723 14.802 1 131.39 ? C3' UMQ 1101 A 1 HETATM 16 C C4' UMQ . . . M 11 -65.418 80.268 14.974 1 134.98 ? C4' UMQ 1101 A 1 HETATM 17 C C5' UMQ . . . M 11 -63.872 80.206 14.879 1 114.22 ? C5' UMQ 1101 A 1 HETATM 18 C C6' UMQ . . . M 11 -63.196 78.903 15.311 1 88 ? C6' UMQ 1101 A 1 HETATM 19 O O1' UMQ . . . M 11 -63.114 82.824 12.565 1 96.24 ? O1' UMQ 1101 A 1 HETATM 20 O O3' UMQ . . . M 11 -67.327 81.869 14.713 1 126.61 ? O3' UMQ 1101 A 1 HETATM 21 O O5' UMQ . . . M 11 -63.512 80.53 13.531 1 109.46 ? O5' UMQ 1101 A 1 HETATM 22 O O6' UMQ . . . M 11 -62.793 79.02 16.681 1 60.25 ? O6' UMQ 1101 A 1 HETATM 23 O O2' UMQ . . . M 11 -65.956 83.09 12.812 1 96.23 ? O2' UMQ 1101 A 1 HETATM 24 C CA UMQ . . . M 11 -61.799 83.044 13.07 1 76.74 ? CA UMQ 1101 A 1 HETATM 25 C CB UMQ . . . M 11 -60.83 82.179 12.281 1 62.31 ? CB UMQ 1101 A 1 HETATM 26 C CC UMQ . . . M 11 -59.435 82.25 12.897 1 67.88 ? CC UMQ 1101 A 1 HETATM 27 C CD UMQ . . . M 11 -58.389 82.833 11.954 1 38.04 ? CD UMQ 1101 A 1 HETATM 28 C CF UMQ . . . M 11 -57.359 81.789 11.556 1 47.61 ? CF UMQ 1101 A 1 HETATM 29 C CG UMQ . . . M 11 -56.029 82.427 11.146 1 41.52 ? CG UMQ 1101 A 1 HETATM 30 C CH UMQ . . . M 11 -55.446 83.209 12.314 1 35.8 ? CH UMQ 1101 A 1 HETATM 31 C CI UMQ . . . M 11 -53.93 83.147 12.259 1 44.55 ? CI UMQ 1101 A 1 HETATM 32 C CJ UMQ . . . M 11 -53.322 83.939 13.409 1 52.76 ? CJ UMQ 1101 A 1 HETATM 33 C CK UMQ . . . M 11 -52.321 83.092 14.182 1 54.41 ? CK UMQ 1101 A 1 HETATM 34 C CL UMQ . . . M 11 -53.046 82.183 15.141 1 63.21 ? CL UMQ 1101 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 577 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 34 #