data_2E74 # _model_server_result.job_id dkZwf58Pumtu91BKBOOBXQ _model_server_result.datetime_utc '2024-11-15 01:22:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1103}' # _entry.id 2E74 # _exptl.entry_id 2E74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.589 _entity.id 11 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description UNDECYL-MALTOSIDE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2E74 _cell.length_a 158.343 _cell.length_b 158.343 _cell.length_c 361.094 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details hexadecameric _pdbx_struct_assembly.oligomeric_count 16 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -79.1715 137.129061 60.182333 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 11 M N N ? 11 N N N ? 11 O N N ? 11 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 D SG CYS 108 D CYS 108 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf2 D SG CYS 113 D CYS 113 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc1 J FE HEM . A HEM 301 1_555 A NE2 HIS 86 A HIS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc2 J FE HEM . A HEM 301 1_555 A NE2 HIS 187 A HIS 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? metalc ? metalc3 K FE HEM . A HEM 302 1_555 A NE2 HIS 100 A HIS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? metalc ? metalc4 K FE HEM . A HEM 302 1_555 A NE2 HIS 202 A HIS 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? covale ? covale1 L CAB HEM . A HEM 303 1_555 A SG CYS 35 A CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc5 T FE HEM . C HEM 301 1_555 C N TYR 1 C TYR 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.925 ? metalc ? metalc6 T FE HEM . C HEM 301 1_555 C NE2 HIS 26 C HIS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? covale ? covale2 T CAC HEM . C HEM 301 1_555 C SG CYS 25 C CYS 25 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? metalc ? metalc7 U FE1 FES . D FES 200 1_555 D SG CYS 108 D CYS 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? metalc ? metalc8 U FE2 FES . D FES 200 1_555 D ND1 HIS 110 D HIS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc9 U FE1 FES . D FES 200 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc10 U FE2 FES . D FES 200 1_555 D ND1 HIS 129 D HIS 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? # _chem_comp.formula 'C23 H44 O11' _chem_comp.formula_weight 496.589 _chem_comp.id UMQ _chem_comp.mon_nstd_flag . _chem_comp.name UNDECYL-MALTOSIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms UNDECYL-BETA-D-MALTOPYRANOSIDE # _atom_sites.entry_id 2E74 _atom_sites.fract_transf_matrix[1][1] 0.006315 _atom_sites.fract_transf_matrix[1][2] 0.003646 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007292 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002769 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 9 CD A 1 1001 1001 CD CD . J 10 HEM A 1 301 301 HEM HEM . K 10 HEM A 1 302 302 HEM HEM . L 10 HEM A 1 303 303 HEM HEM . M 11 UMQ A 1 1101 1101 UMQ UMQ . N 11 UMQ A 1 1102 1102 UMQ UMQ . O 11 UMQ A 1 1103 1103 UMQ UMQ . P 11 UMQ A 1 1104 1104 UMQ UMQ . Q 9 CD B 1 161 4 CD CD . R 12 CLA B 1 201 201 CLA CLA . S 13 OPC B 1 202 1 OPC OPC . T 10 HEM C 1 301 301 HEM HEM . U 14 FES D 1 200 200 FES FES . V 15 SQD D 1 201 11 SQD SQD . W 16 BCR G 1 101 101 BCR BCR . X 13 OPC H 1 1002 1002 OPC OPC . Y 17 HOH A 1 1105 2 HOH HOH . Y 17 HOH A 2 1106 401 HOH HOH . Z 17 HOH B 1 211 211 HOH HOH . Z 17 HOH B 2 212 212 HOH HOH . AA 17 HOH C 1 302 3 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 UMQ . . . O 11 -22.227 102.78 30.415 1 129.99 ? C2 UMQ 1103 A 1 HETATM 2 C C4 UMQ . . . O 11 -23.4 103.499 32.533 1 133.13 ? C4 UMQ 1103 A 1 HETATM 3 C C5 UMQ . . . O 11 -24.715 103.26 31.796 1 132.45 ? C5 UMQ 1103 A 1 HETATM 4 C C6 UMQ . . . O 11 -25.833 104.12 32.364 1 123.3 ? C6 UMQ 1103 A 1 HETATM 5 O O2 UMQ . . . O 11 -21.342 101.797 29.852 1 123.17 ? O2 UMQ 1103 A 1 HETATM 6 O O4 UMQ . . . O 11 -23.575 103.198 33.923 1 129.1 ? O4 UMQ 1103 A 1 HETATM 7 C C1 UMQ . . . O 11 -23.615 102.651 29.772 1 129.97 ? C1 UMQ 1103 A 1 HETATM 8 C C3 UMQ . . . O 11 -22.291 102.63 31.94 1 130.33 ? C3 UMQ 1103 A 1 HETATM 9 O O1 UMQ . . . O 11 -24.085 101.31 29.899 1 115.55 ? O1 UMQ 1103 A 1 HETATM 10 O O3 UMQ . . . O 11 -21.035 102.979 32.54 1 119.2 ? O3 UMQ 1103 A 1 HETATM 11 O O5 UMQ . . . O 11 -24.559 103.53 30.397 1 135.71 ? O5 UMQ 1103 A 1 HETATM 12 O O6 UMQ . . . O 11 -27.042 103.692 31.733 1 117.64 ? O6 UMQ 1103 A 1 HETATM 13 C C1' UMQ . . . O 11 -25.701 98.583 27.276 1 105.95 ? C1' UMQ 1103 A 1 HETATM 14 C C2' UMQ . . . O 11 -24.369 98.741 27.262 1 105.13 ? C2' UMQ 1103 A 1 HETATM 15 C C3' UMQ . . . O 11 -23.698 99.601 28.292 1 102.61 ? C3' UMQ 1103 A 1 HETATM 16 C C4' UMQ . . . O 11 -24.582 100.783 28.675 1 105.34 ? C4' UMQ 1103 A 1 HETATM 17 C C5' UMQ . . . O 11 -26.05 100.418 28.885 1 105.76 ? C5' UMQ 1103 A 1 HETATM 18 C C6' UMQ . . . O 11 -26.849 101.717 29.083 1 108.1 ? C6' UMQ 1103 A 1 HETATM 19 O O1' UMQ . . . O 11 -26.298 97.348 26.755 1 95.27 ? O1' UMQ 1103 A 1 HETATM 20 O O3' UMQ . . . O 11 -22.454 100.087 27.771 1 83.09 ? O3' UMQ 1103 A 1 HETATM 21 O O5' UMQ . . . O 11 -26.571 99.645 27.792 1 108.17 ? O5' UMQ 1103 A 1 HETATM 22 O O6' UMQ . . . O 11 -28.273 101.516 29.135 1 104.98 ? O6' UMQ 1103 A 1 HETATM 23 O O2' UMQ . . . O 11 -23.609 98.141 26.343 1 104.59 ? O2' UMQ 1103 A 1 HETATM 24 C CA UMQ . . . O 11 -27.464 96.762 27.356 1 93.21 ? CA UMQ 1103 A 1 HETATM 25 C CB UMQ . . . O 11 -27.124 95.426 28.036 1 89.04 ? CB UMQ 1103 A 1 HETATM 26 C CC UMQ . . . O 11 -28.355 94.599 28.415 1 76.38 ? CC UMQ 1103 A 1 HETATM 27 C CD UMQ . . . O 11 -28.092 93.099 28.291 1 88.96 ? CD UMQ 1103 A 1 HETATM 28 C CF UMQ . . . O 11 -29.356 92.247 28.453 1 99.2 ? CF UMQ 1103 A 1 HETATM 29 C CG UMQ . . . O 11 -29.03 90.773 28.735 1 112.31 ? CG UMQ 1103 A 1 HETATM 30 C CH UMQ . . . O 11 -30.282 89.913 28.957 1 127.25 ? CH UMQ 1103 A 1 HETATM 31 C CI UMQ . . . O 11 -30.082 88.796 29.995 1 134.07 ? CI UMQ 1103 A 1 HETATM 32 C CJ UMQ . . . O 11 -31.023 87.601 29.78 1 134.07 ? CJ UMQ 1103 A 1 HETATM 33 C CK UMQ . . . O 11 -31.017 86.598 30.942 1 132.68 ? CK UMQ 1103 A 1 HETATM 34 C CL UMQ . . . O 11 -31.773 85.314 30.63 1 117.59 ? CL UMQ 1103 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 34 #