data_2E76
#
_model_server_result.job_id            JJ1ZV0ByN8xjZzMSbYxyJg 
_model_server_result.datetime_utc      '2024-11-25 07:10:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2e76 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":1103}' 
#
_entry.id    2E76 
#
_exptl.entry_id    2E76 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              496.589 
_entity.id                          12 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            UNDECYL-MALTOSIDE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            2E76 
_cell.length_a            157.227 
_cell.length_b            157.227 
_cell.length_c            363.295 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2E76 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        178 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 61 2 2' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    hexadecameric 
_pdbx_struct_assembly.oligomeric_count      16 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_565 x,x-y+1,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -78.6135 136.162576 60.549167 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 12 N N N 
? 12 O N N 
? 12 P N N 
? 12 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 D SG CYS 108 D CYS 108 1_555 D SG CYS 126 D CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
disulf ? disulf2 D SG CYS 113 D CYS 113 1_555 D SG CYS 128 D CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
covale ? covale1 A SG CYS 35 A CYS 35 1_555 L CAB HEM . A HEM 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? 
covale ? covale2 C SG CYS 25 C CYS 25 1_555 V CAC HEM . C HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? 
metalc ? metalc1 A OE2 GLU 75 A GLU 75 1_555 I CD CD . A CD 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc2 A NE2 HIS 86 A HIS 86 1_555 J FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.73 ? 
metalc ? metalc3 A NE2 HIS 100 A HIS 100 1_555 K FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
metalc ? metalc4 A NE2 HIS 187 A HIS 187 1_555 J FE HEM . A HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? 
metalc ? metalc5 A NE2 HIS 202 A HIS 202 1_555 K FE HEM . A HEM 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.915 ? 
metalc ? metalc6 I CD CD . A CD 216 1_555 C NE2 HIS 143 C HIS 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? 
metalc ? metalc7 I CD CD . A CD 216 1_555 BA O HOH . C HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? 
metalc ? metalc8 L FE HEM . A HEM 303 1_555 Z O HOH . A HOH 1106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? 
metalc ? metalc9 L FE HEM . A HEM 303 1_555 U OBD TDS . B TDS 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.495 ? 
metalc ? metalc10 R MG CLA . B CLA 201 1_555 AA O HOH . B HOH 211 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.898 ? 
metalc ? metalc11 C N TYR 1 C TYR 1 1_555 V FE HEM . C HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc12 C NE2 HIS 26 C HIS 26 1_555 V FE HEM . C HEM 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc13 D SG CYS 108 D CYS 108 1_555 W FE1 FES . D FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
metalc ? metalc14 D ND1 HIS 110 D HIS 110 1_555 W FE2 FES . D FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc15 D SG CYS 126 D CYS 126 1_555 W FE1 FES . D FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc16 D ND1 HIS 129 D HIS 129 1_555 W FE2 FES . D FES 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.748 ? 
#
_chem_comp.formula           'C23 H44 O11' 
_chem_comp.formula_weight    496.589 
_chem_comp.id                UMQ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              UNDECYL-MALTOSIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     UNDECYL-BETA-D-MALTOPYRANOSIDE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 O2 UMQ sing 1028 n n 
C2 C1 UMQ sing 1029 n n 
C2 C3 UMQ sing 1030 n n 
C2 H21 UMQ sing 1031 n n 
C4 C5 UMQ sing 1032 n n 
C4 O4 UMQ sing 1033 n n 
C4 C3 UMQ sing 1034 n n 
C4 H41 UMQ sing 1035 n n 
C5 C6 UMQ sing 1036 n n 
C5 O5 UMQ sing 1037 n n 
C5 H51 UMQ sing 1038 n n 
C6 O6 UMQ sing 1039 n n 
C6 H61 UMQ sing 1040 n n 
C6 H62 UMQ sing 1041 n n 
O2 HO21 UMQ sing 1042 n n 
O4 HO41 UMQ sing 1043 n n 
C1 O1 UMQ sing 1044 n n 
C1 O5 UMQ sing 1045 n n 
C1 H11 UMQ sing 1046 n n 
C3 O3 UMQ sing 1047 n n 
C3 H31 UMQ sing 1048 n n 
O1 C4' UMQ sing 1049 n n 
O3 HO31 UMQ sing 1050 n n 
O6 HO61 UMQ sing 1051 n n 
C1' C2' UMQ sing 1052 n n 
C1' O1' UMQ sing 1053 n n 
C1' O5' UMQ sing 1054 n n 
C1' "H1'1" UMQ sing 1055 n n 
C2' C3' UMQ sing 1056 n n 
C2' O2' UMQ sing 1057 n n 
C2' "H2'1" UMQ sing 1058 n n 
C3' C4' UMQ sing 1059 n n 
C3' O3' UMQ sing 1060 n n 
C3' "H3'1" UMQ sing 1061 n n 
C4' C5' UMQ sing 1062 n n 
C4' "H4'1" UMQ sing 1063 n n 
C5' C6' UMQ sing 1064 n n 
C5' O5' UMQ sing 1065 n n 
C5' "H5'1" UMQ sing 1066 n n 
C6' O6' UMQ sing 1067 n n 
C6' "H6'1" UMQ sing 1068 n n 
C6' "H6'2" UMQ sing 1069 n n 
O1' CA UMQ sing 1070 n n 
O3' HO3' UMQ sing 1071 n n 
O6' HO6' UMQ sing 1072 n n 
O2' HO2' UMQ sing 1073 n n 
CA CB UMQ sing 1074 n n 
CA HA1 UMQ sing 1075 n n 
CA HA2 UMQ sing 1076 n n 
CB CC UMQ sing 1077 n n 
CB HB1 UMQ sing 1078 n n 
CB HB2 UMQ sing 1079 n n 
CC CD UMQ sing 1080 n n 
CC HC1 UMQ sing 1081 n n 
CC HC2 UMQ sing 1082 n n 
CD CF UMQ sing 1083 n n 
CD HD1 UMQ sing 1084 n n 
CD HD2 UMQ sing 1085 n n 
CF CG UMQ sing 1086 n n 
CF HF1 UMQ sing 1087 n n 
CF HF2 UMQ sing 1088 n n 
CG CH UMQ sing 1089 n n 
CG HG1 UMQ sing 1090 n n 
CG HG2 UMQ sing 1091 n n 
CH CI UMQ sing 1092 n n 
CH HH1 UMQ sing 1093 n n 
CH HH2 UMQ sing 1094 n n 
CI CJ UMQ sing 1095 n n 
CI HI1 UMQ sing 1096 n n 
CI HI2 UMQ sing 1097 n n 
CJ CK UMQ sing 1098 n n 
CJ HJ1 UMQ sing 1099 n n 
CJ HJ2 UMQ sing 1100 n n 
CK CL UMQ sing 1101 n n 
CK HK1 UMQ sing 1102 n n 
CK HK2 UMQ sing 1103 n n 
CL HL1 UMQ sing 1104 n n 
CL HL2 UMQ sing 1105 n n 
CL HL3 UMQ sing 1106 n n 
#
_atom_sites.entry_id                     2E76 
_atom_sites.fract_transf_matrix[1][1]    0.00636 
_atom_sites.fract_transf_matrix[1][2]    0.003672 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007344 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002753 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 9 CD A 1 216 1 CD CD . 
J 10 HEM A 1 301 301 HEM HEM . 
K 10 HEM A 1 302 302 HEM HEM . 
L 10 HEM A 1 303 303 HEM HEM . 
M 11 OPC A 1 1002 1002 OPC OPC . 
N 12 UMQ A 1 1101 1101 UMQ UMQ . 
O 12 UMQ A 1 1102 1102 UMQ UMQ . 
P 12 UMQ A 1 1103 1103 UMQ UMQ . 
Q 12 UMQ A 1 1104 1104 UMQ UMQ . 
R 13 CLA B 1 201 201 CLA CLA . 
S 11 OPC B 1 1001 1001 OPC OPC . 
T 14 TDS B 1 1201 1201 TDS TDS . 
U 14 TDS B 1 1202 1202 TDS TDS . 
V 10 HEM C 1 301 301 HEM HEM . 
W 15 FES D 1 200 200 FES FES . 
X 16 SQD D 1 201 11 SQD SQD . 
Y 17 BCR G 1 101 101 BCR BCR . 
Z 18 HOH A 1 1105 3 HOH HOH . 
Z 18 HOH A 2 1106 401 HOH HOH . 
AA 18 HOH B 1 211 211 HOH HOH . 
AA 18 HOH B 2 212 212 HOH HOH . 
BA 18 HOH C 1 302 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C2 UMQ . . . P 12 -21.841 103.124 30.349 1 121.64 ? C2 UMQ 1103 A 1 
HETATM 2 C C4 UMQ . . . P 12 -23.479 104.102 32.109 1 126.45 ? C4 UMQ 1103 A 1 
HETATM 3 C C5 UMQ . . . P 12 -24.691 103.739 31.215 1 133.02 ? C5 UMQ 1103 A 1 
HETATM 4 C C6 UMQ . . . P 12 -25.941 104.644 31.394 1 130.75 ? C6 UMQ 1103 A 1 
HETATM 5 O O2 UMQ . . . P 12 -20.679 102.257 30.094 1 90.5 ? O2 UMQ 1103 A 1 
HETATM 6 O O4 UMQ . . . P 12 -23.783 103.935 33.496 1 101.68 ? O4 UMQ 1103 A 1 
HETATM 7 C C1 UMQ . . . P 12 -23.115 102.836 29.47 1 125.44 ? C1 UMQ 1103 A 1 
HETATM 8 C C3 UMQ . . . P 12 -22.222 103.241 31.85 1 120.61 ? C3 UMQ 1103 A 1 
HETATM 9 O O1 UMQ . . . P 12 -23.514 101.44 29.398 1 100.49 ? O1 UMQ 1103 A 1 
HETATM 10 O O3 UMQ . . . P 12 -21.143 103.729 32.669 1 110.12 ? O3 UMQ 1103 A 1 
HETATM 11 O O5 UMQ . . . P 12 -24.248 103.699 29.835 1 141.17 ? O5 UMQ 1103 A 1 
HETATM 12 O O6 UMQ . . . P 12 -27.18 103.939 31.135 1 113.93 ? O6 UMQ 1103 A 1 
HETATM 13 C C1' UMQ . . . P 12 -24.678 98.243 27.018 1 127.17 ? C1' UMQ 1103 A 1 
HETATM 14 C C2' UMQ . . . P 12 -23.377 98.607 26.972 1 120.44 ? C2' UMQ 1103 A 1 
HETATM 15 C C3' UMQ . . . P 12 -22.928 99.635 28.016 1 109.96 ? C3' UMQ 1103 A 1 
HETATM 16 C C4' UMQ . . . P 12 -23.876 100.856 28.142 1 100.77 ? C4' UMQ 1103 A 1 
HETATM 17 C C5' UMQ . . . P 12 -25.354 100.343 28.22 1 118.27 ? C5' UMQ 1103 A 1 
HETATM 18 C C6' UMQ . . . P 12 -26.496 101.405 28.24 1 115.59 ? C6' UMQ 1103 A 1 
HETATM 19 O O1' UMQ . . . P 12 -25.037 96.782 26.916 1 101.64 ? O1' UMQ 1103 A 1 
HETATM 20 O O3' UMQ . . . P 12 -21.509 99.907 27.955 1 94.26 ? O3' UMQ 1103 A 1 
HETATM 21 O O5' UMQ . . . P 12 -25.66 99.363 27.183 1 135.04 ? O5' UMQ 1103 A 1 
HETATM 22 O O6' UMQ . . . P 12 -27.039 101.772 29.542 1 78.02 ? O6' UMQ 1103 A 1 
HETATM 23 O O2' UMQ . . . P 12 -22.547 98.059 26.06 1 108.87 ? O2' UMQ 1103 A 1 
HETATM 24 C CA UMQ . . . P 12 -26.289 96.117 27.317 1 84.67 ? CA UMQ 1103 A 1 
HETATM 25 C CB UMQ . . . P 12 -26.076 94.71 27.949 1 78.09 ? CB UMQ 1103 A 1 
HETATM 26 C CC UMQ . . . P 12 -27.303 93.77 28.063 1 58.48 ? CC UMQ 1103 A 1 
HETATM 27 C CD UMQ . . . P 12 -26.928 92.268 27.907 1 79.43 ? CD UMQ 1103 A 1 
HETATM 28 C CF UMQ . . . P 12 -27.96 91.159 28.279 1 82.31 ? CF UMQ 1103 A 1 
HETATM 29 C CG UMQ . . . P 12 -27.58 89.658 28.015 1 104.58 ? CG UMQ 1103 A 1 
HETATM 30 C CH UMQ . . . P 12 -28.713 88.651 27.643 1 113.25 ? CH UMQ 1103 A 1 
HETATM 31 C CI UMQ . . . P 12 -29.276 87.791 28.785 1 105.48 ? CI UMQ 1103 A 1 
HETATM 32 C CJ UMQ . . . P 12 -29.095 86.252 28.641 1 128.26 ? CJ UMQ 1103 A 1 
HETATM 33 C CK UMQ . . . P 12 -29.052 85.522 30.029 1 129.28 ? CK UMQ 1103 A 1 
HETATM 34 C CL UMQ . . . P 12 -28.914 83.993 30.07 1 85.85 ? CL UMQ 1103 A 1 
#
_model_server_stats.io_time_ms              61 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           261 
_model_server_stats.encode_time_ms          20 
_model_server_stats.element_count           34 
#