data_2E82 # _model_server_result.job_id yfStKp4961L2wGLsnHYA0Q _model_server_result.datetime_utc '2024-11-14 17:43:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2e82 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":351}' # _entry.id 2E82 # _exptl.entry_id 2E82 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2E82 _cell.length_a 150.015 _cell.length_b 181.886 _cell.length_c 50.916 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2E82 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA tetrameric 4 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 2E82 _atom_sites.fract_transf_matrix[1][1] 0.006666 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01964 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FAD A 1 351 351 FAD FAD . F 3 IM3 A 1 352 352 IM3 IDP . G 2 FAD B 1 1351 1351 FAD FAD . H 3 IM3 B 1 1352 1352 IM3 IDP . I 2 FAD C 1 2351 2351 FAD FAD . J 3 IM3 C 1 2352 2352 IM3 IDP . K 2 FAD D 1 3351 3351 FAD FAD . L 3 IM3 D 1 3352 3352 IM3 IDP . M 4 HOH A 1 353 3 HOH HOH . M 4 HOH A 2 354 4 HOH HOH . M 4 HOH A 3 355 6 HOH HOH . M 4 HOH A 4 356 9 HOH HOH . M 4 HOH A 5 357 11 HOH HOH . M 4 HOH A 6 358 13 HOH HOH . M 4 HOH A 7 359 14 HOH HOH . M 4 HOH A 8 360 18 HOH HOH . M 4 HOH A 9 361 24 HOH HOH . M 4 HOH A 10 362 27 HOH HOH . M 4 HOH A 11 363 28 HOH HOH . M 4 HOH A 12 364 30 HOH HOH . M 4 HOH A 13 365 35 HOH HOH . M 4 HOH A 14 366 36 HOH HOH . M 4 HOH A 15 367 38 HOH HOH . M 4 HOH A 16 368 41 HOH HOH . M 4 HOH A 17 369 43 HOH HOH . M 4 HOH A 18 370 47 HOH HOH . M 4 HOH A 19 371 49 HOH HOH . M 4 HOH A 20 372 54 HOH HOH . M 4 HOH A 21 373 55 HOH HOH . M 4 HOH A 22 374 60 HOH HOH . M 4 HOH A 23 375 65 HOH HOH . M 4 HOH A 24 376 66 HOH HOH . M 4 HOH A 25 377 68 HOH HOH . M 4 HOH A 26 378 71 HOH HOH . M 4 HOH A 27 379 72 HOH HOH . M 4 HOH A 28 380 75 HOH HOH . M 4 HOH A 29 381 82 HOH HOH . M 4 HOH A 30 382 88 HOH HOH . M 4 HOH A 31 383 90 HOH HOH . M 4 HOH A 32 384 91 HOH HOH . M 4 HOH A 33 385 96 HOH HOH . M 4 HOH A 34 386 101 HOH HOH . M 4 HOH A 35 387 103 HOH HOH . M 4 HOH A 36 388 113 HOH HOH . M 4 HOH A 37 389 114 HOH HOH . M 4 HOH A 38 390 115 HOH HOH . M 4 HOH A 39 391 118 HOH HOH . M 4 HOH A 40 392 119 HOH HOH . M 4 HOH A 41 393 125 HOH HOH . N 4 HOH B 1 2 2 HOH HOH . N 4 HOH B 2 5 5 HOH HOH . N 4 HOH B 3 7 7 HOH HOH . N 4 HOH B 4 16 16 HOH HOH . N 4 HOH B 5 19 19 HOH HOH . N 4 HOH B 6 23 23 HOH HOH . N 4 HOH B 7 25 25 HOH HOH . N 4 HOH B 8 32 32 HOH HOH . N 4 HOH B 9 33 33 HOH HOH . N 4 HOH B 10 39 39 HOH HOH . N 4 HOH B 11 42 42 HOH HOH . N 4 HOH B 12 45 45 HOH HOH . N 4 HOH B 13 50 50 HOH HOH . N 4 HOH B 14 53 53 HOH HOH . N 4 HOH B 15 56 56 HOH HOH . N 4 HOH B 16 57 57 HOH HOH . N 4 HOH B 17 58 58 HOH HOH . N 4 HOH B 18 62 62 HOH HOH . N 4 HOH B 19 63 63 HOH HOH . N 4 HOH B 20 70 70 HOH HOH . N 4 HOH B 21 84 84 HOH HOH . N 4 HOH B 22 86 86 HOH HOH . N 4 HOH B 23 95 95 HOH HOH . N 4 HOH B 24 99 99 HOH HOH . N 4 HOH B 25 100 100 HOH HOH . N 4 HOH B 26 105 105 HOH HOH . N 4 HOH B 27 107 107 HOH HOH . N 4 HOH B 28 111 111 HOH HOH . N 4 HOH B 29 124 124 HOH HOH . O 4 HOH C 1 1 1 HOH HOH . O 4 HOH C 2 10 10 HOH HOH . O 4 HOH C 3 17 17 HOH HOH . O 4 HOH C 4 20 20 HOH HOH . O 4 HOH C 5 21 21 HOH HOH . O 4 HOH C 6 26 26 HOH HOH . O 4 HOH C 7 29 29 HOH HOH . O 4 HOH C 8 37 37 HOH HOH . O 4 HOH C 9 44 44 HOH HOH . O 4 HOH C 10 52 52 HOH HOH . O 4 HOH C 11 67 67 HOH HOH . O 4 HOH C 12 76 76 HOH HOH . O 4 HOH C 13 79 79 HOH HOH . O 4 HOH C 14 81 81 HOH HOH . O 4 HOH C 15 83 83 HOH HOH . O 4 HOH C 16 102 102 HOH HOH . O 4 HOH C 17 108 108 HOH HOH . O 4 HOH C 18 109 109 HOH HOH . O 4 HOH C 19 110 110 HOH HOH . O 4 HOH C 20 112 112 HOH HOH . O 4 HOH C 21 117 117 HOH HOH . O 4 HOH C 22 122 122 HOH HOH . P 4 HOH D 1 8 8 HOH HOH . P 4 HOH D 2 12 12 HOH HOH . P 4 HOH D 3 15 15 HOH HOH . P 4 HOH D 4 22 22 HOH HOH . P 4 HOH D 5 31 31 HOH HOH . P 4 HOH D 6 34 34 HOH HOH . P 4 HOH D 7 40 40 HOH HOH . P 4 HOH D 8 46 46 HOH HOH . P 4 HOH D 9 48 48 HOH HOH . P 4 HOH D 10 51 51 HOH HOH . P 4 HOH D 11 59 59 HOH HOH . P 4 HOH D 12 61 61 HOH HOH . P 4 HOH D 13 64 64 HOH HOH . P 4 HOH D 14 69 69 HOH HOH . P 4 HOH D 15 73 73 HOH HOH . P 4 HOH D 16 74 74 HOH HOH . P 4 HOH D 17 77 77 HOH HOH . P 4 HOH D 18 78 78 HOH HOH . P 4 HOH D 19 80 80 HOH HOH . P 4 HOH D 20 85 85 HOH HOH . P 4 HOH D 21 87 87 HOH HOH . P 4 HOH D 22 89 89 HOH HOH . P 4 HOH D 23 92 92 HOH HOH . P 4 HOH D 24 93 93 HOH HOH . P 4 HOH D 25 94 94 HOH HOH . P 4 HOH D 26 97 97 HOH HOH . P 4 HOH D 27 98 98 HOH HOH . P 4 HOH D 28 104 104 HOH HOH . P 4 HOH D 29 106 106 HOH HOH . P 4 HOH D 30 116 116 HOH HOH . P 4 HOH D 31 120 120 HOH HOH . P 4 HOH D 32 121 121 HOH HOH . P 4 HOH D 33 123 123 HOH HOH . P 4 HOH D 34 126 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . E 2 37.012 -76.385 -7.715 1 33.54 ? PA FAD 351 A 1 HETATM 2 O O1A FAD . . . E 2 37.55 -75.317 -8.656 1 25.3 ? O1A FAD 351 A 1 HETATM 3 O O2A FAD . . . E 2 36.472 -77.633 -8.37 1 32.77 ? O2A FAD 351 A 1 HETATM 4 O O5B FAD . . . E 2 38.047 -76.996 -6.653 1 31.07 ? O5B FAD 351 A 1 HETATM 5 C C5B FAD . . . E 2 38.806 -78.028 -7.264 1 28.83 ? C5B FAD 351 A 1 HETATM 6 C C4B FAD . . . E 2 39.846 -78.502 -6.313 1 26.37 ? C4B FAD 351 A 1 HETATM 7 O O4B FAD . . . E 2 39.49 -79.858 -6.125 1 25 ? O4B FAD 351 A 1 HETATM 8 C C3B FAD . . . E 2 41.09 -78.459 -7.168 1 26.35 ? C3B FAD 351 A 1 HETATM 9 O O3B FAD . . . E 2 42.171 -77.971 -6.379 1 29.82 ? O3B FAD 351 A 1 HETATM 10 C C2B FAD . . . E 2 41.337 -79.885 -7.568 1 24.51 ? C2B FAD 351 A 1 HETATM 11 O O2B FAD . . . E 2 42.746 -80.097 -7.663 1 24.2 ? O2B FAD 351 A 1 HETATM 12 C C1B FAD . . . E 2 40.667 -80.618 -6.404 1 24.13 ? C1B FAD 351 A 1 HETATM 13 N N9A FAD . . . E 2 40.385 -82.041 -6.693 1 22.6 ? N9A FAD 351 A 1 HETATM 14 C C8A FAD . . . E 2 39.465 -82.504 -7.534 1 22.09 ? C8A FAD 351 A 1 HETATM 15 N N7A FAD . . . E 2 39.547 -83.847 -7.513 1 22.58 ? N7A FAD 351 A 1 HETATM 16 C C5A FAD . . . E 2 40.526 -84.212 -6.657 1 22.5 ? C5A FAD 351 A 1 HETATM 17 C C6A FAD . . . E 2 41.056 -85.438 -6.235 1 23.02 ? C6A FAD 351 A 1 HETATM 18 N N6A FAD . . . E 2 40.561 -86.613 -6.706 1 23.66 ? N6A FAD 351 A 1 HETATM 19 N N1A FAD . . . E 2 42.054 -85.463 -5.335 1 21.95 ? N1A FAD 351 A 1 HETATM 20 C C2A FAD . . . E 2 42.557 -84.319 -4.845 1 22.6 ? C2A FAD 351 A 1 HETATM 21 N N3A FAD . . . E 2 42.057 -83.136 -5.231 1 23.89 ? N3A FAD 351 A 1 HETATM 22 C C4A FAD . . . E 2 41.043 -83.059 -6.135 1 22.26 ? C4A FAD 351 A 1 HETATM 23 N N1 FAD . . . E 2 30.671 -68.752 -11.287 1 14.55 ? N1 FAD 351 A 1 HETATM 24 C C2 FAD . . . E 2 30.029 -67.637 -10.795 1 14.62 ? C2 FAD 351 A 1 HETATM 25 O O2 FAD . . . E 2 29.318 -67.704 -9.75 1 14.68 ? O2 FAD 351 A 1 HETATM 26 N N3 FAD . . . E 2 30.146 -66.416 -11.364 1 13.45 ? N3 FAD 351 A 1 HETATM 27 C C4 FAD . . . E 2 30.883 -66.201 -12.453 1 13.49 ? C4 FAD 351 A 1 HETATM 28 O O4 FAD . . . E 2 30.957 -65.066 -12.949 1 13.93 ? O4 FAD 351 A 1 HETATM 29 C C4X FAD . . . E 2 31.592 -67.341 -13.055 1 14.43 ? C4X FAD 351 A 1 HETATM 30 N N5 FAD . . . E 2 32.369 -67.201 -14.163 1 15.07 ? N5 FAD 351 A 1 HETATM 31 C C5X FAD . . . E 2 33.002 -68.277 -14.682 1 14.08 ? C5X FAD 351 A 1 HETATM 32 C C6 FAD . . . E 2 33.781 -68.109 -15.831 1 13.97 ? C6 FAD 351 A 1 HETATM 33 C C7 FAD . . . E 2 34.449 -69.2 -16.394 1 14.12 ? C7 FAD 351 A 1 HETATM 34 C C7M FAD . . . E 2 35.29 -69.057 -17.621 1 13.85 ? C7M FAD 351 A 1 HETATM 35 C C8 FAD . . . E 2 34.348 -70.435 -15.79 1 14.41 ? C8 FAD 351 A 1 HETATM 36 C C8M FAD . . . E 2 35.068 -71.61 -16.391 1 14.59 ? C8M FAD 351 A 1 HETATM 37 C C9 FAD . . . E 2 33.574 -70.605 -14.634 1 14.26 ? C9 FAD 351 A 1 HETATM 38 C C9A FAD . . . E 2 32.878 -69.535 -14.058 1 14.16 ? C9A FAD 351 A 1 HETATM 39 N N10 FAD . . . E 2 32.11 -69.715 -12.936 1 14.52 ? N10 FAD 351 A 1 HETATM 40 C C10 FAD . . . E 2 31.446 -68.672 -12.399 1 14.72 ? C10 FAD 351 A 1 HETATM 41 C C1' FAD . . . E 2 31.968 -71.05 -12.355 1 14.76 ? C1' FAD 351 A 1 HETATM 42 C C2' FAD . . . E 2 32.528 -71.202 -10.973 1 19 ? C2' FAD 351 A 1 HETATM 43 O O2' FAD . . . E 2 33.888 -70.785 -11.11 1 21.57 ? O2' FAD 351 A 1 HETATM 44 C C3' FAD . . . E 2 32.501 -72.684 -10.564 1 20.5 ? C3' FAD 351 A 1 HETATM 45 O O3' FAD . . . E 2 31.188 -73.25 -10.637 1 15.21 ? O3' FAD 351 A 1 HETATM 46 C C4' FAD . . . E 2 33.08 -72.837 -9.159 1 22.94 ? C4' FAD 351 A 1 HETATM 47 O O4' FAD . . . E 2 34.458 -72.418 -9.14 1 26.6 ? O4' FAD 351 A 1 HETATM 48 C C5' FAD . . . E 2 33.064 -74.27 -8.687 1 22.21 ? C5' FAD 351 A 1 HETATM 49 O O5' FAD . . . E 2 33.843 -74.375 -7.483 1 25.95 ? O5' FAD 351 A 1 HETATM 50 P P FAD . . . E 2 34.635 -75.736 -7.524 1 26.99 ? P FAD 351 A 1 HETATM 51 O O1P FAD . . . E 2 33.758 -76.907 -7.197 1 26.19 ? O1P FAD 351 A 1 HETATM 52 O O2P FAD . . . E 2 35.345 -75.631 -8.882 1 29.98 ? O2P FAD 351 A 1 HETATM 53 O O3P FAD . . . E 2 35.923 -75.762 -6.649 1 31.09 ? O3P FAD 351 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 407 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 53 #