data_2EB8 # _model_server_result.job_id QBu3qfkMJ_WJdzDIoJUUkA _model_server_result.datetime_utc '2024-10-10 17:19:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2eb8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1001}' # _entry.id 2EB8 # _exptl.entry_id 2EB8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 330.825 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (N-SALICYLIDEN-L-PHENYLALANATO)-COPPER(II) _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2EB8 _cell.length_a 32.691 _cell.length_b 59.132 _cell.length_c 74.188 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EB8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H13 Cu N O3' _chem_comp.formula_weight 330.825 _chem_comp.id CUP _chem_comp.mon_nstd_flag . _chem_comp.name (N-SALICYLIDEN-L-PHENYLALANATO)-COPPER(II) _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O3 C8 CUP doub 70 n n C8 C9 CUP sing 71 n n C8 O2 CUP sing 72 n n O2 CU1 CUP sing 73 n n C9 C10 CUP sing 74 n n C9 H9 CUP sing 75 n n C9 N1 CUP sing 76 n n C10 C11 CUP sing 77 n n C10 H101 CUP sing 78 n n C10 H102 CUP sing 79 n n C11 C12 CUP sing 80 n y C11 C16 CUP doub 81 n y C16 H16 CUP sing 82 n n C16 C15 CUP sing 83 n y C15 C14 CUP doub 84 n y C15 H15 CUP sing 85 n n C14 H14 CUP sing 86 n n C14 C13 CUP sing 87 n y C13 H13 CUP sing 88 n n C13 C12 CUP doub 89 n y C12 H12 CUP sing 90 n n N1 C1 CUP doub 91 n n N1 CU1 CUP sing 92 n n CU1 O1 CUP sing 93 n n C1 C2 CUP sing 94 n n C1 H1 CUP sing 95 n n C2 C3 CUP doub 96 n y C2 C7 CUP sing 97 n y C7 O1 CUP sing 98 n n C7 C6 CUP doub 99 n y C6 H6 CUP sing 100 n n C6 C5 CUP sing 101 n y C5 H5 CUP sing 102 n n C5 C4 CUP doub 103 n y C4 H4 CUP sing 104 n n C4 C3 CUP sing 105 n y C3 H3 CUP sing 106 n n # _atom_sites.entry_id 2EB8 _atom_sites.fract_transf_matrix[1][1] 0.030589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016911 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013479 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 2001 1 PO4 PO4 . C 2 PO4 A 1 2002 2 PO4 PO4 . D 2 PO4 A 1 2003 3 PO4 PO4 . E 2 PO4 A 1 2004 4 PO4 PO4 . F 2 PO4 A 1 2005 5 PO4 PO4 . G 3 CUP A 1 1001 1 CUP CUP . H 4 HOH A 1 2006 1 HOH HOH . H 4 HOH A 2 2007 2 HOH HOH . H 4 HOH A 3 2008 3 HOH HOH . H 4 HOH A 4 2009 4 HOH HOH . H 4 HOH A 5 2010 5 HOH HOH . H 4 HOH A 6 2011 6 HOH HOH . H 4 HOH A 7 2012 7 HOH HOH . H 4 HOH A 8 2013 8 HOH HOH . H 4 HOH A 9 2014 9 HOH HOH . H 4 HOH A 10 2015 10 HOH HOH . H 4 HOH A 11 2016 11 HOH HOH . H 4 HOH A 12 2017 12 HOH HOH . H 4 HOH A 13 2018 13 HOH HOH . H 4 HOH A 14 2019 14 HOH HOH . H 4 HOH A 15 2020 15 HOH HOH . H 4 HOH A 16 2021 16 HOH HOH . H 4 HOH A 17 2022 17 HOH HOH . H 4 HOH A 18 2023 18 HOH HOH . H 4 HOH A 19 2024 19 HOH HOH . H 4 HOH A 20 2025 20 HOH HOH . H 4 HOH A 21 2026 21 HOH HOH . H 4 HOH A 22 2027 22 HOH HOH . H 4 HOH A 23 2028 23 HOH HOH . H 4 HOH A 24 2029 24 HOH HOH . H 4 HOH A 25 2030 25 HOH HOH . H 4 HOH A 26 2031 26 HOH HOH . H 4 HOH A 27 2032 27 HOH HOH . H 4 HOH A 28 2033 28 HOH HOH . H 4 HOH A 29 2034 29 HOH HOH . H 4 HOH A 30 2035 30 HOH HOH . H 4 HOH A 31 2036 31 HOH HOH . H 4 HOH A 32 2037 32 HOH HOH . H 4 HOH A 33 2038 33 HOH HOH . H 4 HOH A 34 2039 34 HOH HOH . H 4 HOH A 35 2040 35 HOH HOH . H 4 HOH A 36 2041 36 HOH HOH . H 4 HOH A 37 2042 37 HOH HOH . H 4 HOH A 38 2043 38 HOH HOH . H 4 HOH A 39 2044 39 HOH HOH . H 4 HOH A 40 2045 40 HOH HOH . H 4 HOH A 41 2046 41 HOH HOH . H 4 HOH A 42 2047 42 HOH HOH . H 4 HOH A 43 2048 43 HOH HOH . H 4 HOH A 44 2049 44 HOH HOH . H 4 HOH A 45 2050 45 HOH HOH . H 4 HOH A 46 2051 46 HOH HOH . H 4 HOH A 47 2052 47 HOH HOH . H 4 HOH A 48 2053 48 HOH HOH . H 4 HOH A 49 2054 49 HOH HOH . H 4 HOH A 50 2055 50 HOH HOH . H 4 HOH A 51 2056 51 HOH HOH . H 4 HOH A 52 2057 52 HOH HOH . H 4 HOH A 53 2058 53 HOH HOH . H 4 HOH A 54 2059 54 HOH HOH . H 4 HOH A 55 2060 55 HOH HOH . H 4 HOH A 56 2061 56 HOH HOH . H 4 HOH A 57 2062 57 HOH HOH . H 4 HOH A 58 2063 58 HOH HOH . H 4 HOH A 59 2064 59 HOH HOH . H 4 HOH A 60 2065 60 HOH HOH . H 4 HOH A 61 2066 61 HOH HOH . H 4 HOH A 62 2067 62 HOH HOH . H 4 HOH A 63 2068 63 HOH HOH . H 4 HOH A 64 2069 64 HOH HOH . H 4 HOH A 65 2070 65 HOH HOH . H 4 HOH A 66 2071 66 HOH HOH . H 4 HOH A 67 2072 67 HOH HOH . H 4 HOH A 68 2073 68 HOH HOH . H 4 HOH A 69 2074 69 HOH HOH . H 4 HOH A 70 2075 70 HOH HOH . H 4 HOH A 71 2076 71 HOH HOH . H 4 HOH A 72 2077 72 HOH HOH . H 4 HOH A 73 2078 73 HOH HOH . H 4 HOH A 74 2079 74 HOH HOH . H 4 HOH A 75 2080 75 HOH HOH . H 4 HOH A 76 2081 76 HOH HOH . H 4 HOH A 77 2082 77 HOH HOH . H 4 HOH A 78 2083 78 HOH HOH . H 4 HOH A 79 2084 79 HOH HOH . H 4 HOH A 80 2085 80 HOH HOH . H 4 HOH A 81 2086 81 HOH HOH . H 4 HOH A 82 2087 82 HOH HOH . H 4 HOH A 83 2088 83 HOH HOH . H 4 HOH A 84 2089 84 HOH HOH . H 4 HOH A 85 2090 85 HOH HOH . H 4 HOH A 86 2091 86 HOH HOH . H 4 HOH A 87 2092 87 HOH HOH . H 4 HOH A 88 2093 88 HOH HOH . H 4 HOH A 89 2094 89 HOH HOH . H 4 HOH A 90 2095 90 HOH HOH . H 4 HOH A 91 2096 91 HOH HOH . H 4 HOH A 92 2097 92 HOH HOH . H 4 HOH A 93 2098 93 HOH HOH . H 4 HOH A 94 2099 94 HOH HOH . H 4 HOH A 95 2100 95 HOH HOH . H 4 HOH A 96 2101 96 HOH HOH . H 4 HOH A 97 2102 97 HOH HOH . H 4 HOH A 98 2103 98 HOH HOH . H 4 HOH A 99 2104 99 HOH HOH . H 4 HOH A 100 2105 100 HOH HOH . H 4 HOH A 101 2106 101 HOH HOH . H 4 HOH A 102 2107 102 HOH HOH . H 4 HOH A 103 2108 103 HOH HOH . H 4 HOH A 104 2109 104 HOH HOH . H 4 HOH A 105 2110 105 HOH HOH . H 4 HOH A 106 2111 106 HOH HOH . H 4 HOH A 107 2112 107 HOH HOH . H 4 HOH A 108 2113 108 HOH HOH . H 4 HOH A 109 2114 109 HOH HOH . H 4 HOH A 110 2115 110 HOH HOH . H 4 HOH A 111 2116 111 HOH HOH . H 4 HOH A 112 2117 112 HOH HOH . H 4 HOH A 113 2118 113 HOH HOH . H 4 HOH A 114 2119 114 HOH HOH . H 4 HOH A 115 2120 115 HOH HOH . H 4 HOH A 116 2121 116 HOH HOH . H 4 HOH A 117 2122 117 HOH HOH . H 4 HOH A 118 2123 118 HOH HOH . H 4 HOH A 119 2124 119 HOH HOH . H 4 HOH A 120 2125 120 HOH HOH . H 4 HOH A 121 2126 121 HOH HOH . H 4 HOH A 122 2127 122 HOH HOH . H 4 HOH A 123 2128 123 HOH HOH . H 4 HOH A 124 2129 124 HOH HOH . H 4 HOH A 125 2130 125 HOH HOH . H 4 HOH A 126 2131 126 HOH HOH . H 4 HOH A 127 2132 127 HOH HOH . H 4 HOH A 128 2133 128 HOH HOH . H 4 HOH A 129 2134 129 HOH HOH . H 4 HOH A 130 2135 130 HOH HOH . H 4 HOH A 131 2136 131 HOH HOH . H 4 HOH A 132 2137 132 HOH HOH . H 4 HOH A 133 2138 133 HOH HOH . H 4 HOH A 134 2139 134 HOH HOH . H 4 HOH A 135 2140 135 HOH HOH . H 4 HOH A 136 2141 136 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 CUP . . . G 3 -0.406 6.204 -1.791 1 22.26 ? O3 CUP 1001 A 1 HETATM 2 C C8 CUP . . . G 3 0.133 5.598 -0.87 1 19.7 ? C8 CUP 1001 A 1 HETATM 3 O O2 CUP . . . G 3 1.207 4.661 -1.081 1 20.41 ? O2 CUP 1001 A 1 HETATM 4 C C9 CUP . . . G 3 -0.226 5.806 0.574 1 19.6 ? C9 CUP 1001 A 1 HETATM 5 C C10 CUP . . . G 3 0.724 6.921 1.042 1 22.36 ? C10 CUP 1001 A 1 HETATM 6 C C11 CUP . . . G 3 0.517 7.405 2.456 1 25.36 ? C11 CUP 1001 A 1 HETATM 7 C C16 CUP . . . G 3 -0.623 8.149 2.79 1 26.37 ? C16 CUP 1001 A 1 HETATM 8 C C15 CUP . . . G 3 -0.806 8.592 4.109 1 28.24 ? C15 CUP 1001 A 1 HETATM 9 C C14 CUP . . . G 3 0.164 8.293 5.071 1 27.34 ? C14 CUP 1001 A 1 HETATM 10 C C13 CUP . . . G 3 1.299 7.542 4.748 1 27.75 ? C13 CUP 1001 A 1 HETATM 11 C C12 CUP . . . G 3 1.487 7.105 3.421 1 26.05 ? C12 CUP 1001 A 1 HETATM 12 N N1 CUP . . . G 3 0.078 4.627 1.407 1 18.13 ? N1 CUP 1001 A 1 HETATM 13 CU CU1 CUP . . . G 3 1.52 3.489 0.872 1 20.14 ? CU1 CUP 1001 A 1 HETATM 14 C C1 CUP . . . G 3 -0.608 4.422 2.457 1 19.3 ? C1 CUP 1001 A 1 HETATM 15 C C2 CUP . . . G 3 -0.561 3.275 3.398 1 17.34 ? C2 CUP 1001 A 1 HETATM 16 C C7 CUP . . . G 3 0.34 2.213 3.349 1 17.95 ? C7 CUP 1001 A 1 HETATM 17 O O1 CUP . . . G 3 1.347 2.126 2.439 1 20.96 ? O1 CUP 1001 A 1 HETATM 18 C C6 CUP . . . G 3 0.251 1.192 4.31 1 17.78 ? C6 CUP 1001 A 1 HETATM 19 C C5 CUP . . . G 3 -0.735 1.215 5.28 1 19.17 ? C5 CUP 1001 A 1 HETATM 20 C C4 CUP . . . G 3 -1.63 2.271 5.325 1 19.59 ? C4 CUP 1001 A 1 HETATM 21 C C3 CUP . . . G 3 -1.545 3.292 4.394 1 19.36 ? C3 CUP 1001 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #