data_2EG2 # _model_server_result.job_id wzIwpcgQUlDZZjiYZL2EIg _model_server_result.datetime_utc '2025-04-09 01:38:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2eg2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 2EG2 # _exptl.entry_id 2EG2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.181 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2EG2 _cell.length_a 81.961 _cell.length_b 81.961 _cell.length_c 81.961 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EG2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PQS dodecameric 12 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D 1 1,2,3 A,B,C,D 2 1,4,5,6,2,7,8,9,3,10,11,12 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 3 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 4 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 5 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 7 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 8 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 9 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ATP doub 54 n n PG O2G ATP sing 55 n n PG O3G ATP sing 56 n n PG O3B ATP sing 57 n n O2G HOG2 ATP sing 58 n n O3G HOG3 ATP sing 59 n n PB O1B ATP doub 60 n n PB O2B ATP sing 61 n n PB O3B ATP sing 62 n n PB O3A ATP sing 63 n n O2B HOB2 ATP sing 64 n n PA O1A ATP doub 65 n n PA O2A ATP sing 66 n n PA O3A ATP sing 67 n n PA O5' ATP sing 68 n n O2A HOA2 ATP sing 69 n n O5' C5' ATP sing 70 n n C5' C4' ATP sing 71 n n C5' "H5'1" ATP sing 72 n n C5' "H5'2" ATP sing 73 n n C4' O4' ATP sing 74 n n C4' C3' ATP sing 75 n n C4' H4' ATP sing 76 n n O4' C1' ATP sing 77 n n C3' O3' ATP sing 78 n n C3' C2' ATP sing 79 n n C3' H3' ATP sing 80 n n O3' HO3' ATP sing 81 n n C2' O2' ATP sing 82 n n C2' C1' ATP sing 83 n n C2' H2' ATP sing 84 n n O2' HO2' ATP sing 85 n n C1' N9 ATP sing 86 n n C1' H1' ATP sing 87 n n N9 C8 ATP sing 88 n y N9 C4 ATP sing 89 n y C8 N7 ATP doub 90 n y C8 H8 ATP sing 91 n n N7 C5 ATP sing 92 n y C5 C6 ATP sing 93 n y C5 C4 ATP doub 94 n y C6 N6 ATP sing 95 n n C6 N1 ATP doub 96 n y N6 HN61 ATP sing 97 n n N6 HN62 ATP sing 98 n n N1 C2 ATP sing 99 n y C2 N3 ATP doub 100 n y C2 H2 ATP sing 101 n n N3 C4 ATP sing 102 n y # _atom_sites.entry_id 2EG2 _atom_sites.fract_transf_matrix[1][1] 0.012201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012201 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012201 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 601 1 CL CL1 . C 3 ATP A 1 501 1 ATP ATP . D 4 HOH A 1 602 1 HOH HOH . D 4 HOH A 2 603 2 HOH HOH . D 4 HOH A 3 604 3 HOH HOH . D 4 HOH A 4 605 4 HOH HOH . D 4 HOH A 5 606 5 HOH HOH . D 4 HOH A 6 607 6 HOH HOH . D 4 HOH A 7 608 7 HOH HOH . D 4 HOH A 8 609 8 HOH HOH . D 4 HOH A 9 610 9 HOH HOH . D 4 HOH A 10 611 10 HOH HOH . D 4 HOH A 11 612 11 HOH HOH . D 4 HOH A 12 613 12 HOH HOH . D 4 HOH A 13 614 13 HOH HOH . D 4 HOH A 14 615 14 HOH HOH . D 4 HOH A 15 616 15 HOH HOH . D 4 HOH A 16 617 16 HOH HOH . D 4 HOH A 17 618 17 HOH HOH . D 4 HOH A 18 619 18 HOH HOH . D 4 HOH A 19 620 19 HOH HOH . D 4 HOH A 20 621 20 HOH HOH . D 4 HOH A 21 622 21 HOH HOH . D 4 HOH A 22 623 22 HOH HOH . D 4 HOH A 23 624 23 HOH HOH . D 4 HOH A 24 625 24 HOH HOH . D 4 HOH A 25 626 25 HOH HOH . D 4 HOH A 26 627 26 HOH HOH . D 4 HOH A 27 628 27 HOH HOH . D 4 HOH A 28 629 28 HOH HOH . D 4 HOH A 29 630 29 HOH HOH . D 4 HOH A 30 631 30 HOH HOH . D 4 HOH A 31 632 31 HOH HOH . D 4 HOH A 32 633 32 HOH HOH . D 4 HOH A 33 634 33 HOH HOH . D 4 HOH A 34 635 34 HOH HOH . D 4 HOH A 35 636 35 HOH HOH . D 4 HOH A 36 637 36 HOH HOH . D 4 HOH A 37 638 37 HOH HOH . D 4 HOH A 38 639 38 HOH HOH . D 4 HOH A 39 640 39 HOH HOH . D 4 HOH A 40 641 40 HOH HOH . D 4 HOH A 41 642 41 HOH HOH . D 4 HOH A 42 643 42 HOH HOH . D 4 HOH A 43 644 43 HOH HOH . D 4 HOH A 44 645 44 HOH HOH . D 4 HOH A 45 646 45 HOH HOH . D 4 HOH A 46 647 46 HOH HOH . D 4 HOH A 47 648 47 HOH HOH . D 4 HOH A 48 649 48 HOH HOH . D 4 HOH A 49 650 49 HOH HOH . D 4 HOH A 50 651 50 HOH HOH . D 4 HOH A 51 652 51 HOH HOH . D 4 HOH A 52 653 52 HOH HOH . D 4 HOH A 53 654 53 HOH HOH . D 4 HOH A 54 655 54 HOH HOH . D 4 HOH A 55 656 55 HOH HOH . D 4 HOH A 56 657 56 HOH HOH . D 4 HOH A 57 658 57 HOH HOH . D 4 HOH A 58 659 58 HOH HOH . D 4 HOH A 59 660 59 HOH HOH . D 4 HOH A 60 661 60 HOH HOH . D 4 HOH A 61 662 61 HOH HOH . D 4 HOH A 62 663 62 HOH HOH . D 4 HOH A 63 664 63 HOH HOH . D 4 HOH A 64 665 64 HOH HOH . D 4 HOH A 65 666 65 HOH HOH . D 4 HOH A 66 667 66 HOH HOH . D 4 HOH A 67 668 67 HOH HOH . D 4 HOH A 68 669 68 HOH HOH . D 4 HOH A 69 670 69 HOH HOH . D 4 HOH A 70 671 70 HOH HOH . D 4 HOH A 71 672 71 HOH HOH . D 4 HOH A 72 673 72 HOH HOH . D 4 HOH A 73 674 73 HOH HOH . D 4 HOH A 74 675 74 HOH HOH . D 4 HOH A 75 676 75 HOH HOH . D 4 HOH A 76 677 76 HOH HOH . D 4 HOH A 77 678 77 HOH HOH . D 4 HOH A 78 679 78 HOH HOH . D 4 HOH A 79 680 79 HOH HOH . D 4 HOH A 80 681 80 HOH HOH . D 4 HOH A 81 682 81 HOH HOH . D 4 HOH A 82 683 82 HOH HOH . D 4 HOH A 83 684 83 HOH HOH . D 4 HOH A 84 685 84 HOH HOH . D 4 HOH A 85 686 85 HOH HOH . D 4 HOH A 86 687 86 HOH HOH . D 4 HOH A 87 688 87 HOH HOH . D 4 HOH A 88 689 88 HOH HOH . D 4 HOH A 89 690 89 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . C 3 13.866 30.856 1.448 1 47.5 ? PG ATP 501 A 1 HETATM 2 O O1G ATP . . . C 3 12.751 31.551 2.129 1 49.62 ? O1G ATP 501 A 1 HETATM 3 O O2G ATP . . . C 3 15.261 31.058 2.227 1 51.14 ? O2G ATP 501 A 1 HETATM 4 O O3G ATP . . . C 3 14.108 31.412 -0.044 1 50.33 ? O3G ATP 501 A 1 HETATM 5 P PB ATP . . . C 3 14.801 28.216 1.606 1 50.53 ? PB ATP 501 A 1 HETATM 6 O O1B ATP . . . C 3 14.762 27.036 0.713 1 50.95 ? O1B ATP 501 A 1 HETATM 7 O O2B ATP . . . C 3 16.197 29.008 1.474 1 52.08 ? O2B ATP 501 A 1 HETATM 8 O O3B ATP . . . C 3 13.626 29.271 1.292 1 49.95 ? O3B ATP 501 A 1 HETATM 9 P PA ATP . . . C 3 15.311 28.686 4.327 1 43.07 ? PA ATP 501 A 1 HETATM 10 O O1A ATP . . . C 3 14.359 29.614 4.976 1 44.5 ? O1A ATP 501 A 1 HETATM 11 O O2A ATP . . . C 3 16.577 29.438 3.675 1 48.6 ? O2A ATP 501 A 1 HETATM 12 O O3A ATP . . . C 3 14.622 27.821 3.157 1 47.78 ? O3A ATP 501 A 1 HETATM 13 O O5' ATP . . . C 3 15.928 27.592 5.334 1 43.02 ? O5' ATP 501 A 1 HETATM 14 C C5' ATP . . . C 3 15.879 27.77 6.752 1 37.91 ? C5' ATP 501 A 1 HETATM 15 C C4' ATP . . . C 3 16.367 26.485 7.422 1 33.19 ? C4' ATP 501 A 1 HETATM 16 O O4' ATP . . . C 3 15.565 25.354 7.045 1 33.45 ? O4' ATP 501 A 1 HETATM 17 C C3' ATP . . . C 3 17.739 26.147 6.843 1 33.6 ? C3' ATP 501 A 1 HETATM 18 O O3' ATP . . . C 3 18.725 26.97 7.474 1 34.81 ? O3' ATP 501 A 1 HETATM 19 C C2' ATP . . . C 3 17.831 24.717 7.37 1 29.6 ? C2' ATP 501 A 1 HETATM 20 O O2' ATP . . . C 3 18.053 24.737 8.781 1 24.11 ? O2' ATP 501 A 1 HETATM 21 C C1' ATP . . . C 3 16.42 24.196 7.079 1 31.76 ? C1' ATP 501 A 1 HETATM 22 N N9 ATP . . . C 3 16.372 23.576 5.735 1 32.17 ? N9 ATP 501 A 1 HETATM 23 C C8 ATP . . . C 3 16.049 24.194 4.601 1 32.57 ? C8 ATP 501 A 1 HETATM 24 N N7 ATP . . . C 3 16.081 23.322 3.596 1 33.27 ? N7 ATP 501 A 1 HETATM 25 C C5 ATP . . . C 3 16.427 22.139 4.094 1 30 ? C5 ATP 501 A 1 HETATM 26 C C6 ATP . . . C 3 16.615 20.877 3.546 1 30.71 ? C6 ATP 501 A 1 HETATM 27 N N6 ATP . . . C 3 16.444 20.677 2.242 1 33.21 ? N6 ATP 501 A 1 HETATM 28 N N1 ATP . . . C 3 16.971 19.867 4.352 1 26.42 ? N1 ATP 501 A 1 HETATM 29 C C2 ATP . . . C 3 17.148 20.059 5.647 1 30.07 ? C2 ATP 501 A 1 HETATM 30 N N3 ATP . . . C 3 16.978 21.245 6.204 1 30.04 ? N3 ATP 501 A 1 HETATM 31 C C4 ATP . . . C 3 16.617 22.3 5.459 1 30.27 ? C4 ATP 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #