data_2EI3 # _model_server_result.job_id x84T3t0Fq_dUOK27OWugLQ _model_server_result.datetime_utc '2024-10-11 00:30:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ei3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":901}' # _entry.id 2EI3 # _exptl.entry_id 2EI3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2EI3 _cell.length_a 117.785 _cell.length_b 117.785 _cell.length_c 121.528 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EI3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 5 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 6 'crystal symmetry operation' 6_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 7 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 8 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 G N N ? 5 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 152 A HIS 152 1_555 C FE FE2 . A FE2 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc2 A NE2 HIS 215 A HIS 215 1_555 C FE FE2 . A FE2 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc3 A OE1 GLU 266 A GLU 266 1_555 C FE FE2 . A FE2 399 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc4 D OK1 BPY . A BPY 350 1_555 C FE FE2 . A FE2 399 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc5 D OK2 BPY . A BPY 350 1_555 C FE FE2 . A FE2 399 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc6 C FE FE2 . A FE2 399 1_555 I O HOH . A HOH 903 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.247 ? metalc ? metalc7 C FE FE2 . A FE2 399 1_555 I O HOH . A HOH 904 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.169 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 154 n n C1 C2 GOL sing 155 n n C1 H11 GOL sing 156 n n C1 H12 GOL sing 157 n n O1 HO1 GOL sing 158 n n C2 O2 GOL sing 159 n n C2 C3 GOL sing 160 n n C2 H2 GOL sing 161 n n O2 HO2 GOL sing 162 n n C3 O3 GOL sing 163 n n C3 H31 GOL sing 164 n n C3 H32 GOL sing 165 n n O3 HO3 GOL sing 166 n n # _atom_sites.entry_id 2EI3 _atom_sites.fract_transf_matrix[1][1] 0.00849 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00849 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 398 398 MG MG . C 3 FE2 A 1 399 399 FE2 FE2 . D 4 BPY A 1 350 350 BPY BPY . E 4 BPY A 1 351 351 BPY BPY . F 4 BPY A 1 352 352 BPY BPY . G 5 GOL A 1 901 901 GOL GOL . H 5 GOL A 1 902 902 GOL GOL . I 6 HOH A 1 903 800 HOH HOH . I 6 HOH A 2 904 801 HOH HOH . I 6 HOH A 3 905 802 HOH HOH . I 6 HOH A 4 906 414 HOH HOH . I 6 HOH A 5 907 416 HOH HOH . I 6 HOH A 6 908 420 HOH HOH . I 6 HOH A 7 909 425 HOH HOH . I 6 HOH A 8 910 431 HOH HOH . I 6 HOH A 9 911 400 HOH HOH . I 6 HOH A 10 912 401 HOH HOH . I 6 HOH A 11 913 402 HOH HOH . I 6 HOH A 12 914 403 HOH HOH . I 6 HOH A 13 915 404 HOH HOH . I 6 HOH A 14 916 405 HOH HOH . I 6 HOH A 15 917 406 HOH HOH . I 6 HOH A 16 918 407 HOH HOH . I 6 HOH A 17 919 408 HOH HOH . I 6 HOH A 18 920 409 HOH HOH . I 6 HOH A 19 921 410 HOH HOH . I 6 HOH A 20 922 411 HOH HOH . I 6 HOH A 21 923 412 HOH HOH . I 6 HOH A 22 924 413 HOH HOH . I 6 HOH A 23 925 415 HOH HOH . I 6 HOH A 24 926 417 HOH HOH . I 6 HOH A 25 927 418 HOH HOH . I 6 HOH A 26 928 419 HOH HOH . I 6 HOH A 27 929 421 HOH HOH . I 6 HOH A 28 930 422 HOH HOH . I 6 HOH A 29 931 423 HOH HOH . I 6 HOH A 30 932 424 HOH HOH . I 6 HOH A 31 933 426 HOH HOH . I 6 HOH A 32 934 427 HOH HOH . I 6 HOH A 33 935 428 HOH HOH . I 6 HOH A 34 936 429 HOH HOH . I 6 HOH A 35 937 430 HOH HOH . I 6 HOH A 36 938 432 HOH HOH . I 6 HOH A 37 939 433 HOH HOH . I 6 HOH A 38 940 434 HOH HOH . I 6 HOH A 39 941 435 HOH HOH . I 6 HOH A 40 942 436 HOH HOH . I 6 HOH A 41 943 437 HOH HOH . I 6 HOH A 42 944 438 HOH HOH . I 6 HOH A 43 945 439 HOH HOH . I 6 HOH A 44 946 440 HOH HOH . I 6 HOH A 45 947 441 HOH HOH . I 6 HOH A 46 948 442 HOH HOH . I 6 HOH A 47 949 443 HOH HOH . I 6 HOH A 48 950 444 HOH HOH . I 6 HOH A 49 951 445 HOH HOH . I 6 HOH A 50 952 446 HOH HOH . I 6 HOH A 51 953 447 HOH HOH . I 6 HOH A 52 954 448 HOH HOH . I 6 HOH A 53 955 449 HOH HOH . I 6 HOH A 54 956 450 HOH HOH . I 6 HOH A 55 957 451 HOH HOH . I 6 HOH A 56 958 452 HOH HOH . I 6 HOH A 57 959 453 HOH HOH . I 6 HOH A 58 960 454 HOH HOH . I 6 HOH A 59 961 455 HOH HOH . I 6 HOH A 60 962 456 HOH HOH . I 6 HOH A 61 963 457 HOH HOH . I 6 HOH A 62 964 458 HOH HOH . I 6 HOH A 63 965 459 HOH HOH . I 6 HOH A 64 966 460 HOH HOH . I 6 HOH A 65 967 461 HOH HOH . I 6 HOH A 66 968 462 HOH HOH . I 6 HOH A 67 969 463 HOH HOH . I 6 HOH A 68 970 464 HOH HOH . I 6 HOH A 69 971 465 HOH HOH . I 6 HOH A 70 972 466 HOH HOH . I 6 HOH A 71 973 467 HOH HOH . I 6 HOH A 72 974 468 HOH HOH . I 6 HOH A 73 975 469 HOH HOH . I 6 HOH A 74 976 470 HOH HOH . I 6 HOH A 75 977 471 HOH HOH . I 6 HOH A 76 978 472 HOH HOH . I 6 HOH A 77 979 473 HOH HOH . I 6 HOH A 78 980 474 HOH HOH . I 6 HOH A 79 981 475 HOH HOH . I 6 HOH A 80 982 476 HOH HOH . I 6 HOH A 81 983 477 HOH HOH . I 6 HOH A 82 984 478 HOH HOH . I 6 HOH A 83 985 479 HOH HOH . I 6 HOH A 84 986 480 HOH HOH . I 6 HOH A 85 987 481 HOH HOH . I 6 HOH A 86 988 482 HOH HOH . I 6 HOH A 87 989 483 HOH HOH . I 6 HOH A 88 990 484 HOH HOH . I 6 HOH A 89 991 485 HOH HOH . I 6 HOH A 90 992 486 HOH HOH . I 6 HOH A 91 993 487 HOH HOH . I 6 HOH A 92 994 488 HOH HOH . I 6 HOH A 93 995 489 HOH HOH . I 6 HOH A 94 996 490 HOH HOH . I 6 HOH A 95 997 491 HOH HOH . I 6 HOH A 96 998 492 HOH HOH . I 6 HOH A 97 999 493 HOH HOH . I 6 HOH A 98 1000 494 HOH HOH . I 6 HOH A 99 1001 495 HOH HOH . I 6 HOH A 100 1002 496 HOH HOH . I 6 HOH A 101 1003 497 HOH HOH . I 6 HOH A 102 1004 498 HOH HOH . I 6 HOH A 103 1005 499 HOH HOH . I 6 HOH A 104 1006 500 HOH HOH . I 6 HOH A 105 1007 501 HOH HOH . I 6 HOH A 106 1008 502 HOH HOH . I 6 HOH A 107 1009 503 HOH HOH . I 6 HOH A 108 1010 504 HOH HOH . I 6 HOH A 109 1011 505 HOH HOH . I 6 HOH A 110 1012 506 HOH HOH . I 6 HOH A 111 1013 507 HOH HOH . I 6 HOH A 112 1014 508 HOH HOH . I 6 HOH A 113 1015 509 HOH HOH . I 6 HOH A 114 1016 510 HOH HOH . I 6 HOH A 115 1017 511 HOH HOH . I 6 HOH A 116 1018 512 HOH HOH . I 6 HOH A 117 1019 513 HOH HOH . I 6 HOH A 118 1020 514 HOH HOH . I 6 HOH A 119 1021 515 HOH HOH . I 6 HOH A 120 1022 516 HOH HOH . I 6 HOH A 121 1023 517 HOH HOH . I 6 HOH A 122 1024 518 HOH HOH . I 6 HOH A 123 1025 519 HOH HOH . I 6 HOH A 124 1026 520 HOH HOH . I 6 HOH A 125 1027 521 HOH HOH . I 6 HOH A 126 1028 522 HOH HOH . I 6 HOH A 127 1029 523 HOH HOH . I 6 HOH A 128 1030 524 HOH HOH . I 6 HOH A 129 1031 525 HOH HOH . I 6 HOH A 130 1032 526 HOH HOH . I 6 HOH A 131 1033 527 HOH HOH . I 6 HOH A 132 1034 528 HOH HOH . I 6 HOH A 133 1035 529 HOH HOH . I 6 HOH A 134 1036 530 HOH HOH . I 6 HOH A 135 1037 531 HOH HOH . I 6 HOH A 136 1038 532 HOH HOH . I 6 HOH A 137 1039 533 HOH HOH . I 6 HOH A 138 1040 534 HOH HOH . I 6 HOH A 139 1041 535 HOH HOH . I 6 HOH A 140 1042 536 HOH HOH . I 6 HOH A 141 1043 537 HOH HOH . I 6 HOH A 142 1044 538 HOH HOH . I 6 HOH A 143 1045 539 HOH HOH . I 6 HOH A 144 1046 540 HOH HOH . I 6 HOH A 145 1047 541 HOH HOH . I 6 HOH A 146 1048 542 HOH HOH . I 6 HOH A 147 1049 543 HOH HOH . I 6 HOH A 148 1050 544 HOH HOH . I 6 HOH A 149 1051 545 HOH HOH . I 6 HOH A 150 1052 546 HOH HOH . I 6 HOH A 151 1053 547 HOH HOH . I 6 HOH A 152 1054 548 HOH HOH . I 6 HOH A 153 1055 549 HOH HOH . I 6 HOH A 154 1056 550 HOH HOH . I 6 HOH A 155 1057 551 HOH HOH . I 6 HOH A 156 1058 552 HOH HOH . I 6 HOH A 157 1059 553 HOH HOH . I 6 HOH A 158 1060 554 HOH HOH . I 6 HOH A 159 1061 555 HOH HOH . I 6 HOH A 160 1062 556 HOH HOH . I 6 HOH A 161 1063 557 HOH HOH . I 6 HOH A 162 1064 558 HOH HOH . I 6 HOH A 163 1065 559 HOH HOH . I 6 HOH A 164 1066 560 HOH HOH . I 6 HOH A 165 1067 561 HOH HOH . I 6 HOH A 166 1068 562 HOH HOH . I 6 HOH A 167 1069 563 HOH HOH . I 6 HOH A 168 1070 564 HOH HOH . I 6 HOH A 169 1071 565 HOH HOH . I 6 HOH A 170 1072 566 HOH HOH . I 6 HOH A 171 1073 567 HOH HOH . I 6 HOH A 172 1074 568 HOH HOH . I 6 HOH A 173 1075 569 HOH HOH . I 6 HOH A 174 1076 570 HOH HOH . I 6 HOH A 175 1077 571 HOH HOH . I 6 HOH A 176 1078 572 HOH HOH . I 6 HOH A 177 1079 573 HOH HOH . I 6 HOH A 178 1080 574 HOH HOH . I 6 HOH A 179 1081 575 HOH HOH . I 6 HOH A 180 1082 576 HOH HOH . I 6 HOH A 181 1083 577 HOH HOH . I 6 HOH A 182 1084 578 HOH HOH . I 6 HOH A 183 1085 579 HOH HOH . I 6 HOH A 184 1086 580 HOH HOH . I 6 HOH A 185 1087 581 HOH HOH . I 6 HOH A 186 1088 582 HOH HOH . I 6 HOH A 187 1089 583 HOH HOH . I 6 HOH A 188 1090 584 HOH HOH . I 6 HOH A 189 1091 585 HOH HOH . I 6 HOH A 190 1092 586 HOH HOH . I 6 HOH A 191 1093 587 HOH HOH . I 6 HOH A 192 1094 588 HOH HOH . I 6 HOH A 193 1095 589 HOH HOH . I 6 HOH A 194 1096 590 HOH HOH . I 6 HOH A 195 1097 591 HOH HOH . I 6 HOH A 196 1098 592 HOH HOH . I 6 HOH A 197 1099 593 HOH HOH . I 6 HOH A 198 1100 594 HOH HOH . I 6 HOH A 199 1101 595 HOH HOH . I 6 HOH A 200 1102 596 HOH HOH . I 6 HOH A 201 1103 597 HOH HOH . I 6 HOH A 202 1104 598 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 5 -0.925 29.833 21.143 1 29.24 ? C1 GOL 901 A 1 HETATM 2 O O1 GOL . . . G 5 0.242 30.265 20.468 1 26.6 ? O1 GOL 901 A 1 HETATM 3 C C2 GOL . . . G 5 -2.054 30.849 21.071 1 25.64 ? C2 GOL 901 A 1 HETATM 4 O O2 GOL . . . G 5 -3.227 30.241 21.543 1 28.69 ? O2 GOL 901 A 1 HETATM 5 C C3 GOL . . . G 5 -2.279 31.42 19.645 1 28.5 ? C3 GOL 901 A 1 HETATM 6 O O3 GOL . . . G 5 -2.568 30.442 18.673 1 20.61 ? O3 GOL 901 A 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #