data_2EI4 # _model_server_result.job_id GVjYh9scOiTEoNCa2nti3g _model_server_result.datetime_utc '2024-11-28 03:24:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ei4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":281}' # _entry.id 2EI4 # _exptl.entry_id 2EI4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description alpha-D-glucopyranose _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2EI4 _cell.length_a 98.16 _cell.length_b 98.16 _cell.length_c 56.16 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EI4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 150 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 3 2 1' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 98.16 0 0 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 49.08 85.009054 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A NZ LYS 221 A LYS 221 1_555 C C15 RET . A RET 260 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale2 E O3 L2P . A L2P 280 1_555 B C1 GLC . A GLC 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id GLC _chem_comp.mon_nstd_flag . _chem_comp.name alpha-D-glucopyranose _chem_comp.type 'd-saccharide, alpha linking' _chem_comp.pdbx_synonyms alpha-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 GLC sing 199 n n C1 O1 GLC sing 200 n n C1 O5 GLC sing 201 n n C1 H1 GLC sing 202 n n C2 C3 GLC sing 203 n n C2 O2 GLC sing 204 n n C2 H2 GLC sing 205 n n C3 C4 GLC sing 206 n n C3 O3 GLC sing 207 n n C3 H3 GLC sing 208 n n C4 C5 GLC sing 209 n n C4 O4 GLC sing 210 n n C4 H4 GLC sing 211 n n C5 C6 GLC sing 212 n n C5 O5 GLC sing 213 n n C5 H5 GLC sing 214 n n C6 O6 GLC sing 215 n n C6 H61 GLC sing 216 n n C6 H62 GLC sing 217 n n O1 HO1 GLC sing 218 n n O2 HO2 GLC sing 219 n n O3 HO3 GLC sing 220 n n O4 HO4 GLC sing 221 n n O6 HO6 GLC sing 222 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version GLC DGlcpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 GLC a-D-glucopyranose 'COMMON NAME' GMML 1 GLC a-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 GLC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 2EI4 _atom_sites.fract_transf_matrix[1][1] 0.010187 _atom_sites.fract_transf_matrix[1][2] 0.005882 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLC A 1 281 281 GLC GLC . C 3 RET A 1 260 260 RET RET . D 4 22B A 1 270 270 22B 22B . E 5 L2P A 1 280 280 L2P L2P . F 6 HOH A 1 282 1501 HOH HOH . F 6 HOH A 2 283 1502 HOH HOH . F 6 HOH A 3 284 1503 HOH HOH . F 6 HOH A 4 285 1504 HOH HOH . F 6 HOH A 5 286 1505 HOH HOH . F 6 HOH A 6 287 1506 HOH HOH . F 6 HOH A 7 288 1507 HOH HOH . F 6 HOH A 8 289 1508 HOH HOH . F 6 HOH A 9 290 1509 HOH HOH . F 6 HOH A 10 291 1510 HOH HOH . F 6 HOH A 11 292 1511 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GLC . . . B 2 43.169 27.266 11.13 1 108.05 ? C1 GLC 281 A 1 HETATM 2 C C2 GLC . . . B 2 42.034 27.588 10.078 1 108.24 ? C2 GLC 281 A 1 HETATM 3 C C3 GLC . . . B 2 41.608 26.258 9.364 1 108.42 ? C3 GLC 281 A 1 HETATM 4 C C4 GLC . . . B 2 42.859 25.665 8.65 1 108.55 ? C4 GLC 281 A 1 HETATM 5 C C5 GLC . . . B 2 43.964 25.394 9.735 1 108.48 ? C5 GLC 281 A 1 HETATM 6 C C6 GLC . . . B 2 45.284 24.846 9.087 1 108.53 ? C6 GLC 281 A 1 HETATM 7 O O2 GLC . . . B 2 40.918 28.186 10.752 1 108.22 ? O2 GLC 281 A 1 HETATM 8 O O3 GLC . . . B 2 40.59 26.527 8.392 1 108.43 ? O3 GLC 281 A 1 HETATM 9 O O4 GLC . . . B 2 42.525 24.445 7.972 1 108.78 ? O4 GLC 281 A 1 HETATM 10 O O5 GLC . . . B 2 44.274 26.633 10.428 1 108.39 ? O5 GLC 281 A 1 HETATM 11 O O6 GLC . . . B 2 45.854 25.77 8.147 1 108.5 ? O6 GLC 281 A 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #