data_2EL9 # _model_server_result.job_id CuMTbRNYnHFQBhJB0XznIg _model_server_result.datetime_utc '2024-11-05 04:38:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2el9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":510}' # _entry.id 2EL9 # _exptl.entry_id 2EL9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 483.459 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "5'-O-[(L-HISTIDYLAMINO)SULFONYL]ADENOSINE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.21 _cell.angle_gamma 90 _cell.entry_id 2EL9 _cell.length_a 60.113 _cell.length_b 108.345 _cell.length_c 193.645 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EL9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,I,J 1 1 C,D,G,H,K,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # _chem_comp.formula 'C16 H21 N9 O7 S' _chem_comp.formula_weight 483.459 _chem_comp.id HSS _chem_comp.mon_nstd_flag . _chem_comp.name "5'-O-[(L-HISTIDYLAMINO)SULFONYL]ADENOSINE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "5'-O-[N-(L-HISTIDYL)SULFAMOYL]ADENOSINE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C5 HSS sing 152 n y C4 N9 HSS sing 153 n y C4 N3 HSS doub 154 n y C5 N7 HSS sing 155 n y C5 C6 HSS doub 156 n y C6 N6 HSS sing 157 n n C6 N1 HSS sing 158 n y C8 N7 HSS doub 159 n y C8 N9 HSS sing 160 n y C8 H8 HSS sing 161 n n N1 C2 HSS doub 162 n y N3 C2 HSS sing 163 n y N11 CE1 HSS sing 164 n y N11 CG HSS sing 165 n y N11 HN11 HSS sing 166 n n CE1 N12 HSS doub 167 n y CE1 HE1 HSS sing 168 n n N12 CD2 HSS sing 169 n y CD2 CG HSS doub 170 n y CD2 HD2 HSS sing 171 n n CG CB HSS sing 172 n n CB CA HSS sing 173 n n CB HB1 HSS sing 174 n n CB HB2 HSS sing 175 n n CA N HSS sing 176 n n CA C HSS sing 177 n n CA HA HSS sing 178 n n N HN1 HSS sing 179 n n N HN2 HSS sing 180 n n C O HSS doub 181 n n C N1S HSS sing 182 n n N1S S HSS sing 183 n n N1S HN1S HSS sing 184 n n S O2S HSS doub 185 n n S O5' HSS sing 186 n n S O3S HSS doub 187 n n O5' C5' HSS sing 188 n n C5' C4' HSS sing 189 n n C5' "H5'1" HSS sing 190 n n C5' "H5'2" HSS sing 191 n n C4' O4' HSS sing 192 n n C4' C3' HSS sing 193 n n C4' H4' HSS sing 194 n n O4' C1' HSS sing 195 n n C3' O3' HSS sing 196 n n C3' C2' HSS sing 197 n n C3' H3' HSS sing 198 n n O3' HO3' HSS sing 199 n n C2' C1' HSS sing 200 n n C2' O2' HSS sing 201 n n C2' H2' HSS sing 202 n n O2' HO2' HSS sing 203 n n C1' N9 HSS sing 204 n n C1' H1' HSS sing 205 n n C2 H2 HSS sing 206 n n N6 HN61 HSS sing 207 n n N6 HN62 HSS sing 208 n n # _atom_sites.entry_id 2EL9 _atom_sites.fract_transf_matrix[1][1] 0.016635 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0024 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005218 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HSS A 1 510 510 HSS DRG . F 2 HSS B 1 610 610 HSS DRG . G 2 HSS C 1 710 710 HSS DRG . H 2 HSS D 1 810 810 HSS DRG . I 3 HOH A 1 511 9 HOH TIP . I 3 HOH A 2 512 29 HOH TIP . I 3 HOH A 3 513 51 HOH TIP . I 3 HOH A 4 514 52 HOH TIP . I 3 HOH A 5 515 53 HOH TIP . I 3 HOH A 6 516 54 HOH TIP . I 3 HOH A 7 517 55 HOH TIP . I 3 HOH A 8 518 56 HOH TIP . I 3 HOH A 9 519 57 HOH TIP . I 3 HOH A 10 520 58 HOH TIP . I 3 HOH A 11 521 59 HOH TIP . I 3 HOH A 12 522 60 HOH TIP . I 3 HOH A 13 523 61 HOH TIP . I 3 HOH A 14 524 62 HOH TIP . I 3 HOH A 15 525 63 HOH TIP . I 3 HOH A 16 526 64 HOH TIP . I 3 HOH A 17 527 65 HOH TIP . I 3 HOH A 18 528 66 HOH TIP . I 3 HOH A 19 529 67 HOH TIP . I 3 HOH A 20 530 68 HOH TIP . I 3 HOH A 21 531 69 HOH TIP . I 3 HOH A 22 532 70 HOH TIP . I 3 HOH A 23 533 71 HOH TIP . I 3 HOH A 24 534 72 HOH TIP . I 3 HOH A 25 535 73 HOH TIP . I 3 HOH A 26 536 74 HOH TIP . I 3 HOH A 27 537 75 HOH TIP . I 3 HOH A 28 538 76 HOH TIP . I 3 HOH A 29 539 77 HOH TIP . I 3 HOH A 30 540 78 HOH TIP . I 3 HOH A 31 541 79 HOH TIP . I 3 HOH A 32 542 80 HOH TIP . I 3 HOH A 33 543 81 HOH TIP . I 3 HOH A 34 544 83 HOH TIP . I 3 HOH A 35 545 84 HOH TIP . I 3 HOH A 36 546 85 HOH TIP . I 3 HOH A 37 547 86 HOH TIP . I 3 HOH A 38 548 87 HOH TIP . I 3 HOH A 39 549 88 HOH TIP . I 3 HOH A 40 550 89 HOH TIP . J 3 HOH B 1 611 1 HOH TIP . J 3 HOH B 2 612 2 HOH TIP . J 3 HOH B 3 613 3 HOH TIP . J 3 HOH B 4 614 4 HOH TIP . J 3 HOH B 5 615 5 HOH TIP . J 3 HOH B 6 616 6 HOH TIP . J 3 HOH B 7 617 7 HOH TIP . J 3 HOH B 8 618 8 HOH TIP . J 3 HOH B 9 619 10 HOH TIP . J 3 HOH B 10 620 11 HOH TIP . J 3 HOH B 11 621 12 HOH TIP . J 3 HOH B 12 622 13 HOH TIP . J 3 HOH B 13 623 14 HOH TIP . J 3 HOH B 14 624 15 HOH TIP . J 3 HOH B 15 625 16 HOH TIP . J 3 HOH B 16 626 17 HOH TIP . J 3 HOH B 17 627 18 HOH TIP . J 3 HOH B 18 628 19 HOH TIP . J 3 HOH B 19 629 20 HOH TIP . J 3 HOH B 20 630 21 HOH TIP . J 3 HOH B 21 631 22 HOH TIP . J 3 HOH B 22 632 23 HOH TIP . J 3 HOH B 23 633 24 HOH TIP . J 3 HOH B 24 634 25 HOH TIP . J 3 HOH B 25 635 26 HOH TIP . J 3 HOH B 26 636 27 HOH TIP . J 3 HOH B 27 637 28 HOH TIP . J 3 HOH B 28 638 30 HOH TIP . J 3 HOH B 29 639 31 HOH TIP . J 3 HOH B 30 640 32 HOH TIP . J 3 HOH B 31 641 33 HOH TIP . J 3 HOH B 32 642 34 HOH TIP . J 3 HOH B 33 643 35 HOH TIP . J 3 HOH B 34 644 36 HOH TIP . J 3 HOH B 35 645 37 HOH TIP . J 3 HOH B 36 646 38 HOH TIP . J 3 HOH B 37 647 39 HOH TIP . J 3 HOH B 38 648 40 HOH TIP . J 3 HOH B 39 649 41 HOH TIP . J 3 HOH B 40 650 42 HOH TIP . J 3 HOH B 41 651 43 HOH TIP . J 3 HOH B 42 652 44 HOH TIP . J 3 HOH B 43 653 45 HOH TIP . J 3 HOH B 44 654 46 HOH TIP . J 3 HOH B 45 655 47 HOH TIP . J 3 HOH B 46 656 48 HOH TIP . J 3 HOH B 47 657 49 HOH TIP . J 3 HOH B 48 658 50 HOH TIP . J 3 HOH B 49 659 82 HOH TIP . K 3 HOH C 1 711 156 HOH TIP . K 3 HOH C 2 712 157 HOH TIP . K 3 HOH C 3 713 158 HOH TIP . K 3 HOH C 4 714 159 HOH TIP . K 3 HOH C 5 715 160 HOH TIP . K 3 HOH C 6 716 161 HOH TIP . K 3 HOH C 7 717 162 HOH TIP . K 3 HOH C 8 718 163 HOH TIP . K 3 HOH C 9 719 164 HOH TIP . K 3 HOH C 10 720 165 HOH TIP . K 3 HOH C 11 721 166 HOH TIP . K 3 HOH C 12 722 167 HOH TIP . K 3 HOH C 13 723 168 HOH TIP . K 3 HOH C 14 724 169 HOH TIP . K 3 HOH C 15 725 170 HOH TIP . K 3 HOH C 16 726 171 HOH TIP . K 3 HOH C 17 727 172 HOH TIP . K 3 HOH C 18 728 173 HOH TIP . K 3 HOH C 19 729 174 HOH TIP . K 3 HOH C 20 730 175 HOH TIP . K 3 HOH C 21 731 176 HOH TIP . K 3 HOH C 22 732 177 HOH TIP . K 3 HOH C 23 733 178 HOH TIP . K 3 HOH C 24 734 179 HOH TIP . K 3 HOH C 25 735 180 HOH TIP . K 3 HOH C 26 736 181 HOH TIP . K 3 HOH C 27 737 182 HOH TIP . K 3 HOH C 28 738 183 HOH TIP . K 3 HOH C 29 739 184 HOH TIP . K 3 HOH C 30 740 185 HOH TIP . K 3 HOH C 31 741 186 HOH TIP . K 3 HOH C 32 742 187 HOH TIP . K 3 HOH C 33 743 188 HOH TIP . K 3 HOH C 34 744 189 HOH TIP . K 3 HOH C 35 745 190 HOH TIP . K 3 HOH C 36 746 191 HOH TIP . K 3 HOH C 37 747 192 HOH TIP . K 3 HOH C 38 748 193 HOH TIP . K 3 HOH C 39 749 194 HOH TIP . K 3 HOH C 40 750 195 HOH TIP . K 3 HOH C 41 751 196 HOH TIP . K 3 HOH C 42 752 197 HOH TIP . K 3 HOH C 43 753 198 HOH TIP . K 3 HOH C 44 754 199 HOH TIP . K 3 HOH C 45 755 200 HOH TIP . L 3 HOH D 1 811 90 HOH TIP . L 3 HOH D 2 812 91 HOH TIP . L 3 HOH D 3 813 92 HOH TIP . L 3 HOH D 4 814 93 HOH TIP . L 3 HOH D 5 815 94 HOH TIP . L 3 HOH D 6 816 95 HOH TIP . L 3 HOH D 7 817 96 HOH TIP . L 3 HOH D 8 818 97 HOH TIP . L 3 HOH D 9 819 98 HOH TIP . L 3 HOH D 10 820 99 HOH TIP . L 3 HOH D 11 821 100 HOH TIP . L 3 HOH D 12 822 101 HOH TIP . L 3 HOH D 13 823 102 HOH TIP . L 3 HOH D 14 824 103 HOH TIP . L 3 HOH D 15 825 104 HOH TIP . L 3 HOH D 16 826 105 HOH TIP . L 3 HOH D 17 827 106 HOH TIP . L 3 HOH D 18 828 107 HOH TIP . L 3 HOH D 19 829 108 HOH TIP . L 3 HOH D 20 830 109 HOH TIP . L 3 HOH D 21 831 110 HOH TIP . L 3 HOH D 22 832 111 HOH TIP . L 3 HOH D 23 833 112 HOH TIP . L 3 HOH D 24 834 113 HOH TIP . L 3 HOH D 25 835 114 HOH TIP . L 3 HOH D 26 836 115 HOH TIP . L 3 HOH D 27 837 116 HOH TIP . L 3 HOH D 28 838 117 HOH TIP . L 3 HOH D 29 839 118 HOH TIP . L 3 HOH D 30 840 119 HOH TIP . L 3 HOH D 31 841 120 HOH TIP . L 3 HOH D 32 842 121 HOH TIP . L 3 HOH D 33 843 122 HOH TIP . L 3 HOH D 34 844 123 HOH TIP . L 3 HOH D 35 845 124 HOH TIP . L 3 HOH D 36 846 125 HOH TIP . L 3 HOH D 37 847 126 HOH TIP . L 3 HOH D 38 848 127 HOH TIP . L 3 HOH D 39 849 128 HOH TIP . L 3 HOH D 40 850 129 HOH TIP . L 3 HOH D 41 851 130 HOH TIP . L 3 HOH D 42 852 131 HOH TIP . L 3 HOH D 43 853 132 HOH TIP . L 3 HOH D 44 854 133 HOH TIP . L 3 HOH D 45 855 134 HOH TIP . L 3 HOH D 46 856 135 HOH TIP . L 3 HOH D 47 857 136 HOH TIP . L 3 HOH D 48 858 137 HOH TIP . L 3 HOH D 49 859 138 HOH TIP . L 3 HOH D 50 860 139 HOH TIP . L 3 HOH D 51 861 140 HOH TIP . L 3 HOH D 52 862 141 HOH TIP . L 3 HOH D 53 863 142 HOH TIP . L 3 HOH D 54 864 143 HOH TIP . L 3 HOH D 55 865 144 HOH TIP . L 3 HOH D 56 866 145 HOH TIP . L 3 HOH D 57 867 146 HOH TIP . L 3 HOH D 58 868 147 HOH TIP . L 3 HOH D 59 869 148 HOH TIP . L 3 HOH D 60 870 149 HOH TIP . L 3 HOH D 61 871 150 HOH TIP . L 3 HOH D 62 872 151 HOH TIP . L 3 HOH D 63 873 152 HOH TIP . L 3 HOH D 64 874 153 HOH TIP . L 3 HOH D 65 875 154 HOH TIP . L 3 HOH D 66 876 155 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 HSS . . . E 2 12.234 66.416 155.627 1 37.52 ? C4 HSS 510 A 1 HETATM 2 C C5 HSS . . . E 2 11.469 66.224 154.485 1 28.97 ? C5 HSS 510 A 1 HETATM 3 C C6 HSS . . . E 2 11.969 65.393 153.493 1 33.15 ? C6 HSS 510 A 1 HETATM 4 C C8 HSS . . . E 2 10.422 67.573 155.794 1 42.83 ? C8 HSS 510 A 1 HETATM 5 N N1 HSS . . . E 2 13.161 64.808 153.675 1 45.66 ? N1 HSS 510 A 1 HETATM 6 N N3 HSS . . . E 2 13.415 65.794 155.746 1 34.92 ? N3 HSS 510 A 1 HETATM 7 N N11 HSS . . . E 2 5.462 72.752 164.247 1 46.23 ? N11 HSS 510 A 1 HETATM 8 C CE1 HSS . . . E 2 4.705 72.589 165.329 1 54.51 ? CE1 HSS 510 A 1 HETATM 9 N N12 HSS . . . E 2 4.807 71.32 165.714 1 53.21 ? N12 HSS 510 A 1 HETATM 10 C CD2 HSS . . . E 2 5.628 70.7 164.872 1 51.59 ? CD2 HSS 510 A 1 HETATM 11 C CG HSS . . . E 2 6.029 71.583 163.962 1 48.07 ? CG HSS 510 A 1 HETATM 12 C CB HSS . . . E 2 6.901 71.275 162.744 1 32.05 ? CB HSS 510 A 1 HETATM 13 C CA HSS . . . E 2 5.994 70.892 161.572 1 37.92 ? CA HSS 510 A 1 HETATM 14 N N HSS . . . E 2 5.159 69.743 161.952 1 23.32 ? N HSS 510 A 1 HETATM 15 C C HSS . . . E 2 6.849 70.508 160.365 1 48.98 ? C HSS 510 A 1 HETATM 16 O O HSS . . . E 2 6.901 69.321 160.047 1 55.28 ? O HSS 510 A 1 HETATM 17 N N1S HSS . . . E 2 7.49 71.475 159.713 1 49.91 ? N1S HSS 510 A 1 HETATM 18 S S HSS . . . E 2 8.412 70.881 158.506 1 54.52 ? S HSS 510 A 1 HETATM 19 O O2S HSS . . . E 2 7.994 71.522 157.217 1 74.86 ? O2S HSS 510 A 1 HETATM 20 O O3S HSS . . . E 2 8.243 69.394 158.397 1 77.79 ? O3S HSS 510 A 1 HETATM 21 O O5' HSS . . . E 2 9.796 71.153 158.745 1 65.55 ? O5' HSS 510 A 1 HETATM 22 C C5' HSS . . . E 2 10.526 70.442 159.75 1 56.36 ? C5' HSS 510 A 1 HETATM 23 C C4' HSS . . . E 2 11.541 69.474 159.138 1 49.88 ? C4' HSS 510 A 1 HETATM 24 O O4' HSS . . . E 2 10.942 68.383 158.428 1 48.36 ? O4' HSS 510 A 1 HETATM 25 C C3' HSS . . . E 2 12.348 70.142 158.026 1 59.36 ? C3' HSS 510 A 1 HETATM 26 O O3' HSS . . . E 2 13.324 71.021 158.59 1 71.82 ? O3' HSS 510 A 1 HETATM 27 C C2' HSS . . . E 2 13.046 68.911 157.446 1 50.17 ? C2' HSS 510 A 1 HETATM 28 O O2' HSS . . . E 2 14.257 68.653 158.163 1 50.69 ? O2' HSS 510 A 1 HETATM 29 C C1' HSS . . . E 2 12.034 67.789 157.704 1 45.46 ? C1' HSS 510 A 1 HETATM 30 N N9 HSS . . . E 2 11.561 67.256 156.408 1 47.1 ? N9 HSS 510 A 1 HETATM 31 N N7 HSS . . . E 2 10.36 66.946 154.621 1 36.95 ? N7 HSS 510 A 1 HETATM 32 C C2 HSS . . . E 2 13.858 65.008 154.781 1 41.72 ? C2 HSS 510 A 1 HETATM 33 N N6 HSS . . . E 2 11.28 65.19 152.374 1 47.41 ? N6 HSS 510 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #