data_2ERX # _model_server_result.job_id tWdiO1ZNMhmWVNf5B7BzKQ _model_server_result.datetime_utc '2025-02-26 21:56:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2erx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 2ERX # _exptl.entry_id 2ERX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2ERX _cell.length_a 55.041 _cell.length_b 74.931 _cell.length_c 85.691 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ERX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 46 B CYS 50 1_555 B SG CYS 51 B CYS 55 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? metalc ? metalc1 A OG SER 17 A SER 21 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc2 A OG1 THR 35 A THR 39 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc3 E O3B GDP . A GDP 401 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc4 C O2 PO4 . A PO4 402 1_555 D MG MG . A MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc5 D MG MG . A MG 403 1_555 I O HOH . A HOH 494 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc6 D MG MG . A MG 403 1_555 I O HOH . A HOH 495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? metalc ? metalc7 B OG SER 17 B SER 21 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc8 B OG1 THR 35 B THR 39 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.112 ? metalc ? metalc9 H O3B GDP . B GDP 401 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.07 ? metalc ? metalc10 F O4 PO4 . B PO4 402 1_555 G MG MG . B MG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc11 G MG MG . B MG 403 1_555 J O HOH . B HOH 477 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc12 G MG MG . B MG 403 1_555 J O HOH . B HOH 483 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 305 n n P O2 PO4 sing 306 n n P O3 PO4 sing 307 n n P O4 PO4 sing 308 n n # _atom_sites.entry_id 2ERX _atom_sites.fract_transf_matrix[1][1] 0.018168 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013346 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01167 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 402 402 PO4 PO4 . D 3 MG A 1 403 403 MG MG . E 4 GDP A 1 401 401 GDP GDP . F 2 PO4 B 1 402 402 PO4 PO4 . G 3 MG B 1 403 403 MG MG . H 4 GDP B 1 401 401 GDP GDP . I 5 HOH A 1 404 3 HOH HOH . I 5 HOH A 2 405 4 HOH HOH . I 5 HOH A 3 406 5 HOH HOH . I 5 HOH A 4 407 6 HOH HOH . I 5 HOH A 5 408 7 HOH HOH . I 5 HOH A 6 409 8 HOH HOH . I 5 HOH A 7 410 9 HOH HOH . I 5 HOH A 8 411 10 HOH HOH . I 5 HOH A 9 412 12 HOH HOH . I 5 HOH A 10 413 14 HOH HOH . I 5 HOH A 11 414 15 HOH HOH . I 5 HOH A 12 415 17 HOH HOH . I 5 HOH A 13 416 25 HOH HOH . I 5 HOH A 14 417 26 HOH HOH . I 5 HOH A 15 418 28 HOH HOH . I 5 HOH A 16 419 29 HOH HOH . I 5 HOH A 17 420 33 HOH HOH . I 5 HOH A 18 421 34 HOH HOH . I 5 HOH A 19 422 35 HOH HOH . I 5 HOH A 20 423 39 HOH HOH . I 5 HOH A 21 424 41 HOH HOH . I 5 HOH A 22 425 42 HOH HOH . I 5 HOH A 23 426 43 HOH HOH . I 5 HOH A 24 427 45 HOH HOH . I 5 HOH A 25 428 47 HOH HOH . I 5 HOH A 26 429 48 HOH HOH . I 5 HOH A 27 430 53 HOH HOH . I 5 HOH A 28 431 59 HOH HOH . I 5 HOH A 29 432 60 HOH HOH . I 5 HOH A 30 433 61 HOH HOH . I 5 HOH A 31 434 63 HOH HOH . I 5 HOH A 32 435 64 HOH HOH . I 5 HOH A 33 436 66 HOH HOH . I 5 HOH A 34 437 67 HOH HOH . I 5 HOH A 35 438 68 HOH HOH . I 5 HOH A 36 439 69 HOH HOH . I 5 HOH A 37 440 71 HOH HOH . I 5 HOH A 38 441 72 HOH HOH . I 5 HOH A 39 442 73 HOH HOH . I 5 HOH A 40 443 75 HOH HOH . I 5 HOH A 41 444 79 HOH HOH . I 5 HOH A 42 445 80 HOH HOH . I 5 HOH A 43 446 81 HOH HOH . I 5 HOH A 44 447 84 HOH HOH . I 5 HOH A 45 448 85 HOH HOH . I 5 HOH A 46 449 86 HOH HOH . I 5 HOH A 47 450 88 HOH HOH . I 5 HOH A 48 451 90 HOH HOH . I 5 HOH A 49 452 94 HOH HOH . I 5 HOH A 50 453 97 HOH HOH . I 5 HOH A 51 454 98 HOH HOH . I 5 HOH A 52 455 99 HOH HOH . I 5 HOH A 53 456 101 HOH HOH . I 5 HOH A 54 457 105 HOH HOH . I 5 HOH A 55 458 107 HOH HOH . I 5 HOH A 56 459 108 HOH HOH . I 5 HOH A 57 460 110 HOH HOH . I 5 HOH A 58 461 118 HOH HOH . I 5 HOH A 59 462 120 HOH HOH . I 5 HOH A 60 463 121 HOH HOH . I 5 HOH A 61 464 122 HOH HOH . I 5 HOH A 62 465 123 HOH HOH . I 5 HOH A 63 466 124 HOH HOH . I 5 HOH A 64 467 126 HOH HOH . I 5 HOH A 65 468 127 HOH HOH . I 5 HOH A 66 469 128 HOH HOH . I 5 HOH A 67 470 129 HOH HOH . I 5 HOH A 68 471 132 HOH HOH . I 5 HOH A 69 472 133 HOH HOH . I 5 HOH A 70 473 136 HOH HOH . I 5 HOH A 71 474 137 HOH HOH . I 5 HOH A 72 475 139 HOH HOH . I 5 HOH A 73 476 142 HOH HOH . I 5 HOH A 74 477 143 HOH HOH . I 5 HOH A 75 478 145 HOH HOH . I 5 HOH A 76 479 147 HOH HOH . I 5 HOH A 77 480 148 HOH HOH . I 5 HOH A 78 481 149 HOH HOH . I 5 HOH A 79 482 151 HOH HOH . I 5 HOH A 80 483 152 HOH HOH . I 5 HOH A 81 484 153 HOH HOH . I 5 HOH A 82 485 154 HOH HOH . I 5 HOH A 83 486 155 HOH HOH . I 5 HOH A 84 487 156 HOH HOH . I 5 HOH A 85 488 159 HOH HOH . I 5 HOH A 86 489 160 HOH HOH . I 5 HOH A 87 490 163 HOH HOH . I 5 HOH A 88 491 167 HOH HOH . I 5 HOH A 89 492 168 HOH HOH . I 5 HOH A 90 493 169 HOH HOH . I 5 HOH A 91 494 170 HOH HOH . I 5 HOH A 92 495 171 HOH HOH . I 5 HOH A 93 496 173 HOH HOH . I 5 HOH A 94 497 176 HOH HOH . I 5 HOH A 95 498 177 HOH HOH . I 5 HOH A 96 499 178 HOH HOH . I 5 HOH A 97 500 179 HOH HOH . I 5 HOH A 98 501 183 HOH HOH . I 5 HOH A 99 502 185 HOH HOH . I 5 HOH A 100 503 187 HOH HOH . I 5 HOH A 101 504 188 HOH HOH . I 5 HOH A 102 505 190 HOH HOH . I 5 HOH A 103 506 191 HOH HOH . I 5 HOH A 104 507 192 HOH HOH . I 5 HOH A 105 508 199 HOH HOH . I 5 HOH A 106 509 203 HOH HOH . J 5 HOH B 1 404 1 HOH HOH . J 5 HOH B 2 405 2 HOH HOH . J 5 HOH B 3 406 11 HOH HOH . J 5 HOH B 4 407 13 HOH HOH . J 5 HOH B 5 408 16 HOH HOH . J 5 HOH B 6 409 18 HOH HOH . J 5 HOH B 7 410 19 HOH HOH . J 5 HOH B 8 411 20 HOH HOH . J 5 HOH B 9 412 21 HOH HOH . J 5 HOH B 10 413 22 HOH HOH . J 5 HOH B 11 414 23 HOH HOH . J 5 HOH B 12 415 24 HOH HOH . J 5 HOH B 13 416 27 HOH HOH . J 5 HOH B 14 417 30 HOH HOH . J 5 HOH B 15 418 31 HOH HOH . J 5 HOH B 16 419 32 HOH HOH . J 5 HOH B 17 420 36 HOH HOH . J 5 HOH B 18 421 37 HOH HOH . J 5 HOH B 19 422 38 HOH HOH . J 5 HOH B 20 423 40 HOH HOH . J 5 HOH B 21 424 44 HOH HOH . J 5 HOH B 22 425 46 HOH HOH . J 5 HOH B 23 426 49 HOH HOH . J 5 HOH B 24 427 50 HOH HOH . J 5 HOH B 25 428 51 HOH HOH . J 5 HOH B 26 429 52 HOH HOH . J 5 HOH B 27 430 54 HOH HOH . J 5 HOH B 28 431 55 HOH HOH . J 5 HOH B 29 432 56 HOH HOH . J 5 HOH B 30 433 57 HOH HOH . J 5 HOH B 31 434 58 HOH HOH . J 5 HOH B 32 435 62 HOH HOH . J 5 HOH B 33 436 65 HOH HOH . J 5 HOH B 34 437 70 HOH HOH . J 5 HOH B 35 438 74 HOH HOH . J 5 HOH B 36 439 76 HOH HOH . J 5 HOH B 37 440 77 HOH HOH . J 5 HOH B 38 441 78 HOH HOH . J 5 HOH B 39 442 82 HOH HOH . J 5 HOH B 40 443 83 HOH HOH . J 5 HOH B 41 444 87 HOH HOH . J 5 HOH B 42 445 89 HOH HOH . J 5 HOH B 43 446 91 HOH HOH . J 5 HOH B 44 447 92 HOH HOH . J 5 HOH B 45 448 93 HOH HOH . J 5 HOH B 46 449 95 HOH HOH . J 5 HOH B 47 450 96 HOH HOH . J 5 HOH B 48 451 100 HOH HOH . J 5 HOH B 49 452 102 HOH HOH . J 5 HOH B 50 453 103 HOH HOH . J 5 HOH B 51 454 104 HOH HOH . J 5 HOH B 52 455 106 HOH HOH . J 5 HOH B 53 456 109 HOH HOH . J 5 HOH B 54 457 111 HOH HOH . J 5 HOH B 55 458 112 HOH HOH . J 5 HOH B 56 459 113 HOH HOH . J 5 HOH B 57 460 114 HOH HOH . J 5 HOH B 58 461 115 HOH HOH . J 5 HOH B 59 462 116 HOH HOH . J 5 HOH B 60 463 117 HOH HOH . J 5 HOH B 61 464 119 HOH HOH . J 5 HOH B 62 465 125 HOH HOH . J 5 HOH B 63 466 130 HOH HOH . J 5 HOH B 64 467 131 HOH HOH . J 5 HOH B 65 468 134 HOH HOH . J 5 HOH B 66 469 135 HOH HOH . J 5 HOH B 67 470 138 HOH HOH . J 5 HOH B 68 471 140 HOH HOH . J 5 HOH B 69 472 141 HOH HOH . J 5 HOH B 70 473 144 HOH HOH . J 5 HOH B 71 474 146 HOH HOH . J 5 HOH B 72 475 150 HOH HOH . J 5 HOH B 73 476 157 HOH HOH . J 5 HOH B 74 477 158 HOH HOH . J 5 HOH B 75 478 161 HOH HOH . J 5 HOH B 76 479 162 HOH HOH . J 5 HOH B 77 480 164 HOH HOH . J 5 HOH B 78 481 165 HOH HOH . J 5 HOH B 79 482 166 HOH HOH . J 5 HOH B 80 483 172 HOH HOH . J 5 HOH B 81 484 174 HOH HOH . J 5 HOH B 82 485 175 HOH HOH . J 5 HOH B 83 486 180 HOH HOH . J 5 HOH B 84 487 181 HOH HOH . J 5 HOH B 85 488 182 HOH HOH . J 5 HOH B 86 489 184 HOH HOH . J 5 HOH B 87 490 186 HOH HOH . J 5 HOH B 88 491 189 HOH HOH . J 5 HOH B 89 492 193 HOH HOH . J 5 HOH B 90 493 194 HOH HOH . J 5 HOH B 91 494 195 HOH HOH . J 5 HOH B 92 495 196 HOH HOH . J 5 HOH B 93 496 197 HOH HOH . J 5 HOH B 94 497 198 HOH HOH . J 5 HOH B 95 498 200 HOH HOH . J 5 HOH B 96 499 201 HOH HOH . J 5 HOH B 97 500 202 HOH HOH . J 5 HOH B 98 501 204 HOH HOH . J 5 HOH B 99 502 205 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . C 2 0.028 15.911 31.9 1 20.9 ? P PO4 402 A 1 HETATM 2 O O1 PO4 . . . C 2 1.102 15.651 30.849 1 23.86 ? O1 PO4 402 A 1 HETATM 3 O O2 PO4 . . . C 2 -1.296 16.245 31.373 1 21.66 ? O2 PO4 402 A 1 HETATM 4 O O3 PO4 . . . C 2 0.007 14.806 32.923 1 19.78 ? O3 PO4 402 A 1 HETATM 5 O O4 PO4 . . . C 2 0.438 17.073 32.799 1 21.99 ? O4 PO4 402 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #