data_2ESV # _model_server_result.job_id BYM2_nXtK-IK9Y8osE92gg _model_server_result.datetime_utc '2025-06-23 01:44:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2esv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1005}' # _entry.id 2ESV # _exptl.entry_id 2ESV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 114.66 _cell.angle_gamma 90 _cell.entry_id 2ESV _cell.length_a 235.096 _cell.length_b 41.462 _cell.length_c 112.471 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ESV _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N ? 6 H N N ? 6 I N N ? 6 J N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 100 A CYS 101 1_555 A SG CYS 163 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 A SG CYS 202 A CYS 203 1_555 A SG CYS 258 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf4 D SG CYS 20 D CYS 21 1_555 D SG CYS 86 D CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 D SG CYS 132 D CYS 138 1_555 D SG CYS 182 D CYS 188 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf6 D SG CYS 157 D CYS 163 1_555 E SG CYS 167 E CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf7 E SG CYS 21 E CYS 23 1_555 E SG CYS 90 E CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf8 E SG CYS 141 E CYS 148 1_555 E SG CYS 206 E CYS 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2ESV _atom_sites.fract_transf_matrix[1][1] 0.004254 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001953 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024118 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009783 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 6 IOD B 1 1005 1005 IOD IOD . G 6 IOD D 1 1001 1001 IOD IOD . H 6 IOD E 1 1002 1002 IOD IOD . I 6 IOD E 1 1003 1003 IOD IOD . J 6 IOD E 1 1004 1004 IOD IOD . K 7 HOH A 1 277 4 HOH HOH . K 7 HOH A 2 278 5 HOH HOH . K 7 HOH A 3 279 6 HOH HOH . K 7 HOH A 4 280 7 HOH HOH . K 7 HOH A 5 281 8 HOH HOH . K 7 HOH A 6 282 17 HOH HOH . K 7 HOH A 7 283 18 HOH HOH . K 7 HOH A 8 284 20 HOH HOH . K 7 HOH A 9 285 25 HOH HOH . K 7 HOH A 10 286 32 HOH HOH . K 7 HOH A 11 287 34 HOH HOH . K 7 HOH A 12 288 36 HOH HOH . K 7 HOH A 13 289 46 HOH HOH . K 7 HOH A 14 290 47 HOH HOH . K 7 HOH A 15 291 61 HOH HOH . K 7 HOH A 16 292 66 HOH HOH . K 7 HOH A 17 293 71 HOH HOH . K 7 HOH A 18 294 72 HOH HOH . K 7 HOH A 19 295 74 HOH HOH . K 7 HOH A 20 296 75 HOH HOH . K 7 HOH A 21 297 79 HOH HOH . K 7 HOH A 22 298 82 HOH HOH . K 7 HOH A 23 299 89 HOH HOH . K 7 HOH A 24 300 90 HOH HOH . K 7 HOH A 25 301 91 HOH HOH . K 7 HOH A 26 302 92 HOH HOH . K 7 HOH A 27 303 94 HOH HOH . K 7 HOH A 28 304 95 HOH HOH . K 7 HOH A 29 305 98 HOH HOH . K 7 HOH A 30 306 113 HOH HOH . K 7 HOH A 31 307 114 HOH HOH . K 7 HOH A 32 308 116 HOH HOH . K 7 HOH A 33 309 123 HOH HOH . K 7 HOH A 34 310 142 HOH HOH . K 7 HOH A 35 311 148 HOH HOH . K 7 HOH A 36 312 149 HOH HOH . K 7 HOH A 37 313 162 HOH HOH . K 7 HOH A 38 314 169 HOH HOH . K 7 HOH A 39 315 170 HOH HOH . K 7 HOH A 40 316 175 HOH HOH . K 7 HOH A 41 317 184 HOH HOH . K 7 HOH A 42 318 188 HOH HOH . K 7 HOH A 43 319 193 HOH HOH . K 7 HOH A 44 320 194 HOH HOH . K 7 HOH A 45 321 200 HOH HOH . K 7 HOH A 46 322 205 HOH HOH . K 7 HOH A 47 323 208 HOH HOH . K 7 HOH A 48 324 218 HOH HOH . K 7 HOH A 49 325 222 HOH HOH . K 7 HOH A 50 326 223 HOH HOH . K 7 HOH A 51 327 231 HOH HOH . L 7 HOH B 1 1006 1 HOH HOH . L 7 HOH B 2 1007 13 HOH HOH . L 7 HOH B 3 1008 27 HOH HOH . L 7 HOH B 4 1009 28 HOH HOH . L 7 HOH B 5 1010 38 HOH HOH . L 7 HOH B 6 1011 51 HOH HOH . L 7 HOH B 7 1012 78 HOH HOH . L 7 HOH B 8 1013 83 HOH HOH . L 7 HOH B 9 1014 85 HOH HOH . L 7 HOH B 10 1015 101 HOH HOH . L 7 HOH B 11 1016 115 HOH HOH . L 7 HOH B 12 1017 121 HOH HOH . L 7 HOH B 13 1018 135 HOH HOH . L 7 HOH B 14 1019 139 HOH HOH . L 7 HOH B 15 1020 141 HOH HOH . L 7 HOH B 16 1021 151 HOH HOH . L 7 HOH B 17 1022 154 HOH HOH . L 7 HOH B 18 1023 199 HOH HOH . L 7 HOH B 19 1024 203 HOH HOH . L 7 HOH B 20 1025 226 HOH HOH . L 7 HOH B 21 1026 232 HOH HOH . M 7 HOH P 1 23 23 HOH HOH . M 7 HOH P 2 206 206 HOH HOH . M 7 HOH P 3 212 212 HOH HOH . N 7 HOH D 1 1002 9 HOH HOH . N 7 HOH D 2 1003 12 HOH HOH . N 7 HOH D 3 1004 15 HOH HOH . N 7 HOH D 4 1005 21 HOH HOH . N 7 HOH D 5 1006 22 HOH HOH . N 7 HOH D 6 1007 24 HOH HOH . N 7 HOH D 7 1008 26 HOH HOH . N 7 HOH D 8 1009 35 HOH HOH . N 7 HOH D 9 1010 37 HOH HOH . N 7 HOH D 10 1011 39 HOH HOH . N 7 HOH D 11 1012 40 HOH HOH . N 7 HOH D 12 1013 41 HOH HOH . N 7 HOH D 13 1014 43 HOH HOH . N 7 HOH D 14 1015 44 HOH HOH . N 7 HOH D 15 1016 48 HOH HOH . N 7 HOH D 16 1017 49 HOH HOH . N 7 HOH D 17 1018 52 HOH HOH . N 7 HOH D 18 1019 53 HOH HOH . N 7 HOH D 19 1020 54 HOH HOH . N 7 HOH D 20 1021 57 HOH HOH . N 7 HOH D 21 1022 60 HOH HOH . N 7 HOH D 22 1023 62 HOH HOH . N 7 HOH D 23 1024 64 HOH HOH . N 7 HOH D 24 1025 68 HOH HOH . N 7 HOH D 25 1026 69 HOH HOH . N 7 HOH D 26 1027 76 HOH HOH . N 7 HOH D 27 1028 80 HOH HOH . N 7 HOH D 28 1029 84 HOH HOH . N 7 HOH D 29 1030 93 HOH HOH . N 7 HOH D 30 1031 97 HOH HOH . N 7 HOH D 31 1032 102 HOH HOH . N 7 HOH D 32 1033 104 HOH HOH . N 7 HOH D 33 1034 105 HOH HOH . N 7 HOH D 34 1035 107 HOH HOH . N 7 HOH D 35 1036 109 HOH HOH . N 7 HOH D 36 1037 119 HOH HOH . N 7 HOH D 37 1038 120 HOH HOH . N 7 HOH D 38 1039 124 HOH HOH . N 7 HOH D 39 1040 125 HOH HOH . N 7 HOH D 40 1041 133 HOH HOH . N 7 HOH D 41 1042 136 HOH HOH . N 7 HOH D 42 1043 137 HOH HOH . N 7 HOH D 43 1044 150 HOH HOH . N 7 HOH D 44 1045 161 HOH HOH . N 7 HOH D 45 1046 164 HOH HOH . N 7 HOH D 46 1047 167 HOH HOH . N 7 HOH D 47 1048 176 HOH HOH . N 7 HOH D 48 1049 183 HOH HOH . N 7 HOH D 49 1050 189 HOH HOH . N 7 HOH D 50 1051 191 HOH HOH . N 7 HOH D 51 1052 198 HOH HOH . N 7 HOH D 52 1053 207 HOH HOH . N 7 HOH D 53 1054 209 HOH HOH . O 7 HOH E 1 1005 2 HOH HOH . O 7 HOH E 2 1006 3 HOH HOH . O 7 HOH E 3 1007 10 HOH HOH . O 7 HOH E 4 1008 11 HOH HOH . O 7 HOH E 5 1009 14 HOH HOH . O 7 HOH E 6 1010 16 HOH HOH . O 7 HOH E 7 1011 19 HOH HOH . O 7 HOH E 8 1012 29 HOH HOH . O 7 HOH E 9 1013 30 HOH HOH . O 7 HOH E 10 1014 31 HOH HOH . O 7 HOH E 11 1015 33 HOH HOH . O 7 HOH E 12 1016 42 HOH HOH . O 7 HOH E 13 1017 45 HOH HOH . O 7 HOH E 14 1018 50 HOH HOH . O 7 HOH E 15 1019 55 HOH HOH . O 7 HOH E 16 1020 56 HOH HOH . O 7 HOH E 17 1021 58 HOH HOH . O 7 HOH E 18 1022 59 HOH HOH . O 7 HOH E 19 1023 63 HOH HOH . O 7 HOH E 20 1024 65 HOH HOH . O 7 HOH E 21 1025 67 HOH HOH . O 7 HOH E 22 1026 70 HOH HOH . O 7 HOH E 23 1027 73 HOH HOH . O 7 HOH E 24 1028 77 HOH HOH . O 7 HOH E 25 1029 81 HOH HOH . O 7 HOH E 26 1030 86 HOH HOH . O 7 HOH E 27 1031 87 HOH HOH . O 7 HOH E 28 1032 88 HOH HOH . O 7 HOH E 29 1033 96 HOH HOH . O 7 HOH E 30 1034 99 HOH HOH . O 7 HOH E 31 1035 100 HOH HOH . O 7 HOH E 32 1036 103 HOH HOH . O 7 HOH E 33 1037 106 HOH HOH . O 7 HOH E 34 1038 108 HOH HOH . O 7 HOH E 35 1039 110 HOH HOH . O 7 HOH E 36 1040 111 HOH HOH . O 7 HOH E 37 1041 112 HOH HOH . O 7 HOH E 38 1042 117 HOH HOH . O 7 HOH E 39 1043 118 HOH HOH . O 7 HOH E 40 1044 122 HOH HOH . O 7 HOH E 41 1045 126 HOH HOH . O 7 HOH E 42 1046 134 HOH HOH . O 7 HOH E 43 1047 144 HOH HOH . O 7 HOH E 44 1048 147 HOH HOH . O 7 HOH E 45 1049 153 HOH HOH . O 7 HOH E 46 1050 155 HOH HOH . O 7 HOH E 47 1051 173 HOH HOH . O 7 HOH E 48 1052 178 HOH HOH . O 7 HOH E 49 1053 180 HOH HOH . O 7 HOH E 50 1054 190 HOH HOH . O 7 HOH E 51 1055 195 HOH HOH . O 7 HOH E 52 1056 201 HOH HOH . O 7 HOH E 53 1057 214 HOH HOH . O 7 HOH E 54 1058 217 HOH HOH . O 7 HOH E 55 1059 219 HOH HOH . O 7 HOH E 56 1060 225 HOH HOH . O 7 HOH E 57 1061 230 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x 79.689 _atom_site.Cartn_y 13.807 _atom_site.Cartn_z 31.805 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 30.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 1005 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 44 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #