data_2ETJ # _model_server_result.job_id g7bNw_N9tud-FfkO--zEZw _model_server_result.datetime_utc '2024-12-22 06:13:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2etj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":241}' # _entry.id 2ETJ # _exptl.entry_id 2ETJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ETJ _cell.length_a 51.821 _cell.length_b 51.821 _cell.length_c 76.293 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ETJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 13 A MSE 1 1_555 A N GLY 14 A GLY 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C ILE 73 A ILE 61 1_555 A N MSE 74 A MSE 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale3 A C MSE 74 A MSE 62 1_555 A N GLU 75 A GLU 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale4 A C ALA 101 A ALA 89 1_555 A N MSE 102 A MSE 90 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale5 A C MSE 102 A MSE 90 1_555 A N ASN 103 A ASN 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.309 ? covale ? covale6 A C LEU 156 A LEU 144 1_555 A N MSE 157 A MSE 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale7 A C MSE 157 A MSE 145 1_555 A N SER 158 A SER 146 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale8 A C ARG 162 A ARG 150 1_555 A N MSE 163 A MSE 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale9 A C MSE 163 A MSE 151 1_555 A N TYR 164 A TYR 152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? metalc ? metalc1 A OD1 ASP 30 A ASP 18 1_555 B MG MG . A MG 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc2 A OD2 ASP 119 A ASP 107 1_555 B MG MG . A MG 239 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc3 B MG MG . A MG 239 1_555 I O HOH . A HOH 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc4 B MG MG . A MG 239 1_555 I O HOH . A HOH 396 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc5 B MG MG . A MG 239 1_555 I O HOH . A HOH 397 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.884 ? metalc ? metalc6 B MG MG . A MG 239 1_555 I O HOH . A HOH 398 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.929 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 2ETJ _atom_sites.fract_transf_matrix[1][1] 0.0193 _atom_sites.fract_transf_matrix[1][2] 0.01114 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02228 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01311 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG A 1 239 1 MG MG . C 3 CL A 1 240 2 CL CL . D 4 EDO A 1 241 3 EDO EDO . E 4 EDO A 1 242 4 EDO EDO . F 4 EDO A 1 243 5 EDO EDO . G 4 EDO A 1 244 6 EDO EDO . H 4 EDO A 1 245 7 EDO EDO . I 5 HOH A 1 246 8 HOH HOH . I 5 HOH A 2 247 9 HOH HOH . I 5 HOH A 3 248 10 HOH HOH . I 5 HOH A 4 249 11 HOH HOH . I 5 HOH A 5 250 12 HOH HOH . I 5 HOH A 6 251 13 HOH HOH . I 5 HOH A 7 252 14 HOH HOH . I 5 HOH A 8 253 15 HOH HOH . I 5 HOH A 9 254 16 HOH HOH . I 5 HOH A 10 255 17 HOH HOH . I 5 HOH A 11 256 18 HOH HOH . I 5 HOH A 12 257 19 HOH HOH . I 5 HOH A 13 258 20 HOH HOH . I 5 HOH A 14 259 21 HOH HOH . I 5 HOH A 15 260 22 HOH HOH . I 5 HOH A 16 261 23 HOH HOH . I 5 HOH A 17 262 24 HOH HOH . I 5 HOH A 18 263 25 HOH HOH . I 5 HOH A 19 264 26 HOH HOH . I 5 HOH A 20 265 27 HOH HOH . I 5 HOH A 21 266 28 HOH HOH . I 5 HOH A 22 267 29 HOH HOH . I 5 HOH A 23 268 30 HOH HOH . I 5 HOH A 24 269 31 HOH HOH . I 5 HOH A 25 270 32 HOH HOH . I 5 HOH A 26 271 33 HOH HOH . I 5 HOH A 27 272 34 HOH HOH . I 5 HOH A 28 273 35 HOH HOH . I 5 HOH A 29 274 36 HOH HOH . I 5 HOH A 30 275 37 HOH HOH . I 5 HOH A 31 276 38 HOH HOH . I 5 HOH A 32 277 39 HOH HOH . I 5 HOH A 33 278 40 HOH HOH . I 5 HOH A 34 279 41 HOH HOH . I 5 HOH A 35 280 42 HOH HOH . I 5 HOH A 36 281 43 HOH HOH . I 5 HOH A 37 282 44 HOH HOH . I 5 HOH A 38 283 45 HOH HOH . I 5 HOH A 39 284 46 HOH HOH . I 5 HOH A 40 285 47 HOH HOH . I 5 HOH A 41 286 48 HOH HOH . I 5 HOH A 42 287 49 HOH HOH . I 5 HOH A 43 288 50 HOH HOH . I 5 HOH A 44 289 51 HOH HOH . I 5 HOH A 45 290 52 HOH HOH . I 5 HOH A 46 291 53 HOH HOH . I 5 HOH A 47 292 54 HOH HOH . I 5 HOH A 48 293 55 HOH HOH . I 5 HOH A 49 294 56 HOH HOH . I 5 HOH A 50 295 57 HOH HOH . I 5 HOH A 51 296 58 HOH HOH . I 5 HOH A 52 297 59 HOH HOH . I 5 HOH A 53 298 60 HOH HOH . I 5 HOH A 54 299 61 HOH HOH . I 5 HOH A 55 300 62 HOH HOH . I 5 HOH A 56 301 63 HOH HOH . I 5 HOH A 57 302 64 HOH HOH . I 5 HOH A 58 303 65 HOH HOH . I 5 HOH A 59 304 66 HOH HOH . I 5 HOH A 60 305 67 HOH HOH . I 5 HOH A 61 306 68 HOH HOH . I 5 HOH A 62 307 69 HOH HOH . I 5 HOH A 63 308 70 HOH HOH . I 5 HOH A 64 309 71 HOH HOH . I 5 HOH A 65 310 72 HOH HOH . I 5 HOH A 66 311 73 HOH HOH . I 5 HOH A 67 312 74 HOH HOH . I 5 HOH A 68 313 75 HOH HOH . I 5 HOH A 69 314 76 HOH HOH . I 5 HOH A 70 315 77 HOH HOH . I 5 HOH A 71 316 78 HOH HOH . I 5 HOH A 72 317 79 HOH HOH . I 5 HOH A 73 318 80 HOH HOH . I 5 HOH A 74 319 81 HOH HOH . I 5 HOH A 75 320 82 HOH HOH . I 5 HOH A 76 321 83 HOH HOH . I 5 HOH A 77 322 84 HOH HOH . I 5 HOH A 78 323 85 HOH HOH . I 5 HOH A 79 324 86 HOH HOH . I 5 HOH A 80 325 87 HOH HOH . I 5 HOH A 81 326 88 HOH HOH . I 5 HOH A 82 327 89 HOH HOH . I 5 HOH A 83 328 90 HOH HOH . I 5 HOH A 84 329 91 HOH HOH . I 5 HOH A 85 330 92 HOH HOH . I 5 HOH A 86 331 93 HOH HOH . I 5 HOH A 87 332 94 HOH HOH . I 5 HOH A 88 333 95 HOH HOH . I 5 HOH A 89 334 96 HOH HOH . I 5 HOH A 90 335 97 HOH HOH . I 5 HOH A 91 336 98 HOH HOH . I 5 HOH A 92 337 99 HOH HOH . I 5 HOH A 93 338 100 HOH HOH . I 5 HOH A 94 339 101 HOH HOH . I 5 HOH A 95 340 102 HOH HOH . I 5 HOH A 96 341 103 HOH HOH . I 5 HOH A 97 342 104 HOH HOH . I 5 HOH A 98 343 105 HOH HOH . I 5 HOH A 99 344 106 HOH HOH . I 5 HOH A 100 345 107 HOH HOH . I 5 HOH A 101 346 108 HOH HOH . I 5 HOH A 102 347 109 HOH HOH . I 5 HOH A 103 348 110 HOH HOH . I 5 HOH A 104 349 111 HOH HOH . I 5 HOH A 105 350 112 HOH HOH . I 5 HOH A 106 351 113 HOH HOH . I 5 HOH A 107 352 114 HOH HOH . I 5 HOH A 108 353 115 HOH HOH . I 5 HOH A 109 354 116 HOH HOH . I 5 HOH A 110 355 117 HOH HOH . I 5 HOH A 111 356 118 HOH HOH . I 5 HOH A 112 357 119 HOH HOH . I 5 HOH A 113 358 120 HOH HOH . I 5 HOH A 114 359 121 HOH HOH . I 5 HOH A 115 360 122 HOH HOH . I 5 HOH A 116 361 123 HOH HOH . I 5 HOH A 117 362 124 HOH HOH . I 5 HOH A 118 363 125 HOH HOH . I 5 HOH A 119 364 126 HOH HOH . I 5 HOH A 120 365 127 HOH HOH . I 5 HOH A 121 366 128 HOH HOH . I 5 HOH A 122 367 129 HOH HOH . I 5 HOH A 123 368 130 HOH HOH . I 5 HOH A 124 369 131 HOH HOH . I 5 HOH A 125 370 132 HOH HOH . I 5 HOH A 126 371 133 HOH HOH . I 5 HOH A 127 372 134 HOH HOH . I 5 HOH A 128 373 135 HOH HOH . I 5 HOH A 129 374 136 HOH HOH . I 5 HOH A 130 375 137 HOH HOH . I 5 HOH A 131 376 138 HOH HOH . I 5 HOH A 132 377 139 HOH HOH . I 5 HOH A 133 378 140 HOH HOH . I 5 HOH A 134 379 142 HOH HOH . I 5 HOH A 135 380 143 HOH HOH . I 5 HOH A 136 381 144 HOH HOH . I 5 HOH A 137 382 145 HOH HOH . I 5 HOH A 138 383 146 HOH HOH . I 5 HOH A 139 384 147 HOH HOH . I 5 HOH A 140 385 148 HOH HOH . I 5 HOH A 141 386 149 HOH HOH . I 5 HOH A 142 387 150 HOH HOH . I 5 HOH A 143 388 151 HOH HOH . I 5 HOH A 144 389 152 HOH HOH . I 5 HOH A 145 390 153 HOH HOH . I 5 HOH A 146 391 154 HOH HOH . I 5 HOH A 147 392 155 HOH HOH . I 5 HOH A 148 393 156 HOH HOH . I 5 HOH A 149 394 157 HOH HOH . I 5 HOH A 150 395 158 HOH HOH . I 5 HOH A 151 396 159 HOH HOH . I 5 HOH A 152 397 160 HOH HOH . I 5 HOH A 153 398 161 HOH HOH . I 5 HOH A 154 399 162 HOH HOH . I 5 HOH A 155 400 163 HOH HOH . I 5 HOH A 156 401 164 HOH HOH . I 5 HOH A 157 402 165 HOH HOH . I 5 HOH A 158 403 166 HOH HOH . I 5 HOH A 159 404 167 HOH HOH . I 5 HOH A 160 405 168 HOH HOH . I 5 HOH A 161 406 169 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 12.424 12.985 -4.72 1 46.72 ? C1 EDO 241 A 1 HETATM 2 O O1 EDO . . . D 4 13.074 13.597 -5.841 1 47.75 ? O1 EDO 241 A 1 HETATM 3 C C2 EDO . . . D 4 12.705 11.5 -4.584 1 50.75 ? C2 EDO 241 A 1 HETATM 4 O O2 EDO . . . D 4 13.714 11.067 -5.501 1 53.18 ? O2 EDO 241 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 1279 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #