data_2ETR # _model_server_result.job_id dxSwdPtZLsBhdgNE8HpzBA _model_server_result.datetime_utc '2024-11-23 22:03:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2etr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":416}' # _entry.id 2ETR # _exptl.entry_id 2ETR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 247.336 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(R)-TRANS-4-(1-AMINOETHYL)-N-(4-PYRIDYL) CYCLOHEXANECARBOXAMIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2ETR _cell.length_a 180.865 _cell.length_b 180.865 _cell.length_c 91.456 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2ETR _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H21 N3 O' _chem_comp.formula_weight 247.336 _chem_comp.id Y27 _chem_comp.mon_nstd_flag . _chem_comp.name '(R)-TRANS-4-(1-AMINOETHYL)-N-(4-PYRIDYL) CYCLOHEXANECARBOXAMIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O23 C22 Y27 doub 376 n n C22 C31 Y27 sing 377 n n C22 N21 Y27 sing 378 n n C31 C36 Y27 sing 379 n n C31 C32 Y27 sing 380 n n C31 H31 Y27 sing 381 n n C36 C35 Y27 sing 382 n n C36 H361 Y27 sing 383 n n C36 H362 Y27 sing 384 n n C35 C34 Y27 sing 385 n n C35 H351 Y27 sing 386 n n C35 H352 Y27 sing 387 n n C34 C33 Y27 sing 388 n n C34 C41 Y27 sing 389 n n C34 H34 Y27 sing 390 n n C33 C32 Y27 sing 391 n n C33 H331 Y27 sing 392 n n C33 H332 Y27 sing 393 n n C32 H321 Y27 sing 394 n n C32 H322 Y27 sing 395 n n C41 C42 Y27 sing 396 n n C41 N43 Y27 sing 397 n n C41 H41 Y27 sing 398 n n C42 H421 Y27 sing 399 n n C42 H422 Y27 sing 400 n n C42 H423 Y27 sing 401 n n N43 H431 Y27 sing 402 n n N43 H432 Y27 sing 403 n n N21 C14 Y27 sing 404 n n N21 H21 Y27 sing 405 n n C14 C15 Y27 doub 406 n y C14 C13 Y27 sing 407 n y C15 C16 Y27 sing 408 n y C15 H15 Y27 sing 409 n n C16 N11 Y27 doub 410 n y C16 H16 Y27 sing 411 n n N11 C12 Y27 sing 412 n y C12 C13 Y27 doub 413 n y C12 H12 Y27 sing 414 n n C13 H13 Y27 sing 415 n n # _atom_sites.entry_id 2ETR _atom_sites.fract_transf_matrix[1][1] 0.005529 _atom_sites.fract_transf_matrix[1][2] 0.003192 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006384 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010934 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Y27 A 1 416 201 Y27 Y27 . D 2 Y27 B 1 416 202 Y27 Y27 . E 3 HOH A 1 417 2 HOH HOH . E 3 HOH A 2 418 3 HOH HOH . E 3 HOH A 3 419 4 HOH HOH . E 3 HOH A 4 420 5 HOH HOH . E 3 HOH A 5 421 6 HOH HOH . E 3 HOH A 6 422 8 HOH HOH . E 3 HOH A 7 423 13 HOH HOH . E 3 HOH A 8 424 15 HOH HOH . E 3 HOH A 9 425 16 HOH HOH . E 3 HOH A 10 426 21 HOH HOH . E 3 HOH A 11 427 24 HOH HOH . E 3 HOH A 12 428 25 HOH HOH . E 3 HOH A 13 429 26 HOH HOH . E 3 HOH A 14 430 27 HOH HOH . E 3 HOH A 15 431 30 HOH HOH . E 3 HOH A 16 432 32 HOH HOH . E 3 HOH A 17 433 33 HOH HOH . E 3 HOH A 18 434 36 HOH HOH . E 3 HOH A 19 435 38 HOH HOH . E 3 HOH A 20 436 39 HOH HOH . E 3 HOH A 21 437 40 HOH HOH . E 3 HOH A 22 438 42 HOH HOH . E 3 HOH A 23 439 46 HOH HOH . E 3 HOH A 24 440 47 HOH HOH . E 3 HOH A 25 441 48 HOH HOH . E 3 HOH A 26 442 50 HOH HOH . E 3 HOH A 27 443 52 HOH HOH . E 3 HOH A 28 444 53 HOH HOH . E 3 HOH A 29 445 60 HOH HOH . E 3 HOH A 30 446 63 HOH HOH . E 3 HOH A 31 447 65 HOH HOH . E 3 HOH A 32 448 66 HOH HOH . E 3 HOH A 33 449 67 HOH HOH . E 3 HOH A 34 450 71 HOH HOH . E 3 HOH A 35 451 72 HOH HOH . E 3 HOH A 36 452 75 HOH HOH . E 3 HOH A 37 453 76 HOH HOH . E 3 HOH A 38 454 77 HOH HOH . E 3 HOH A 39 455 78 HOH HOH . E 3 HOH A 40 456 79 HOH HOH . E 3 HOH A 41 457 80 HOH HOH . E 3 HOH A 42 458 85 HOH HOH . E 3 HOH A 43 459 87 HOH HOH . E 3 HOH A 44 460 90 HOH HOH . E 3 HOH A 45 461 92 HOH HOH . E 3 HOH A 46 462 93 HOH HOH . E 3 HOH A 47 463 95 HOH HOH . E 3 HOH A 48 464 101 HOH HOH . E 3 HOH A 49 465 102 HOH HOH . E 3 HOH A 50 466 103 HOH HOH . E 3 HOH A 51 467 104 HOH HOH . E 3 HOH A 52 468 105 HOH HOH . E 3 HOH A 53 469 108 HOH HOH . E 3 HOH A 54 470 114 HOH HOH . E 3 HOH A 55 471 116 HOH HOH . E 3 HOH A 56 472 122 HOH HOH . F 3 HOH B 1 417 1 HOH HOH . F 3 HOH B 2 418 7 HOH HOH . F 3 HOH B 3 419 9 HOH HOH . F 3 HOH B 4 420 10 HOH HOH . F 3 HOH B 5 421 11 HOH HOH . F 3 HOH B 6 422 12 HOH HOH . F 3 HOH B 7 423 17 HOH HOH . F 3 HOH B 8 424 18 HOH HOH . F 3 HOH B 9 425 19 HOH HOH . F 3 HOH B 10 426 22 HOH HOH . F 3 HOH B 11 427 23 HOH HOH . F 3 HOH B 12 428 28 HOH HOH . F 3 HOH B 13 429 29 HOH HOH . F 3 HOH B 14 430 31 HOH HOH . F 3 HOH B 15 431 34 HOH HOH . F 3 HOH B 16 432 35 HOH HOH . F 3 HOH B 17 433 37 HOH HOH . F 3 HOH B 18 434 41 HOH HOH . F 3 HOH B 19 435 43 HOH HOH . F 3 HOH B 20 436 44 HOH HOH . F 3 HOH B 21 437 45 HOH HOH . F 3 HOH B 22 438 49 HOH HOH . F 3 HOH B 23 439 51 HOH HOH . F 3 HOH B 24 440 58 HOH HOH . F 3 HOH B 25 441 62 HOH HOH . F 3 HOH B 26 442 64 HOH HOH . F 3 HOH B 27 443 68 HOH HOH . F 3 HOH B 28 444 69 HOH HOH . F 3 HOH B 29 445 70 HOH HOH . F 3 HOH B 30 446 73 HOH HOH . F 3 HOH B 31 447 74 HOH HOH . F 3 HOH B 32 448 81 HOH HOH . F 3 HOH B 33 449 82 HOH HOH . F 3 HOH B 34 450 83 HOH HOH . F 3 HOH B 35 451 84 HOH HOH . F 3 HOH B 36 452 86 HOH HOH . F 3 HOH B 37 453 88 HOH HOH . F 3 HOH B 38 454 91 HOH HOH . F 3 HOH B 39 455 94 HOH HOH . F 3 HOH B 40 456 96 HOH HOH . F 3 HOH B 41 457 97 HOH HOH . F 3 HOH B 42 458 98 HOH HOH . F 3 HOH B 43 459 99 HOH HOH . F 3 HOH B 44 460 100 HOH HOH . F 3 HOH B 45 461 107 HOH HOH . F 3 HOH B 46 462 109 HOH HOH . F 3 HOH B 47 463 110 HOH HOH . F 3 HOH B 48 464 111 HOH HOH . F 3 HOH B 49 465 112 HOH HOH . F 3 HOH B 50 466 113 HOH HOH . F 3 HOH B 51 467 115 HOH HOH . F 3 HOH B 52 468 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O23 Y27 . . . D 2 0.539 134.145 19.988 1 51.26 ? O23 Y27 416 B 1 HETATM 2 C C22 Y27 . . . D 2 -0.405 134.91 20.129 1 47.46 ? C22 Y27 416 B 1 HETATM 3 C C31 Y27 . . . D 2 -1.189 134.947 21.416 1 45.31 ? C31 Y27 416 B 1 HETATM 4 C C36 Y27 . . . D 2 -2.301 133.895 21.407 1 44.22 ? C36 Y27 416 B 1 HETATM 5 C C35 Y27 . . . D 2 -3.129 133.96 22.694 1 47.69 ? C35 Y27 416 B 1 HETATM 6 C C34 Y27 . . . D 2 -2.261 133.818 23.957 1 50.47 ? C34 Y27 416 B 1 HETATM 7 C C33 Y27 . . . D 2 -1.104 134.825 23.932 1 46.16 ? C33 Y27 416 B 1 HETATM 8 C C32 Y27 . . . D 2 -0.298 134.71 22.639 1 44.98 ? C32 Y27 416 B 1 HETATM 9 C C41 Y27 . . . D 2 -3.061 133.896 25.267 1 51.68 ? C41 Y27 416 B 1 HETATM 10 C C42 Y27 . . . D 2 -3.843 135.199 25.447 1 53.42 ? C42 Y27 416 B 1 HETATM 11 N N43 Y27 . . . D 2 -3.983 132.778 25.359 1 52.04 ? N43 Y27 416 B 1 HETATM 12 N N21 Y27 . . . D 2 -0.837 135.769 19.197 1 50.1 ? N21 Y27 416 B 1 HETATM 13 C C14 Y27 . . . D 2 -0.35 135.93 17.937 1 51.34 ? C14 Y27 416 B 1 HETATM 14 C C15 Y27 . . . D 2 -0.477 137.181 17.334 1 49.46 ? C15 Y27 416 B 1 HETATM 15 C C16 Y27 . . . D 2 0.002 137.376 16.039 1 52.04 ? C16 Y27 416 B 1 HETATM 16 N N11 Y27 . . . D 2 0.582 136.368 15.369 1 54.52 ? N11 Y27 416 B 1 HETATM 17 C C12 Y27 . . . D 2 0.716 135.149 15.919 1 56.27 ? C12 Y27 416 B 1 HETATM 18 C C13 Y27 . . . D 2 0.251 134.899 17.211 1 55.31 ? C13 Y27 416 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #