data_2EV5 # _model_server_result.job_id x2tUzL3xe2PzvdloRZHhAw _model_server_result.datetime_utc '2024-10-12 21:20:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2ev5 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1151}' # _entry.id 2EV5 # _exptl.entry_id 2EV5 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.76 _cell.angle_gamma 90 _cell.entry_id 2EV5 _cell.length_a 49.69 _cell.length_b 45.77 _cell.length_c 74.73 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EV5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 8 A ASP 8 1_555 D CA CA . A CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.875 ? metalc ? metalc2 A OD2 ASP 8 A ASP 8 1_555 D CA CA . A CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc3 A OE2 GLU 11 A GLU 11 1_555 C CA CA . A CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc4 A OE1 GLU 11 A GLU 11 1_555 C CA CA . A CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc5 A ND1 HIS 77 A HIS 77 1_555 C CA CA . A CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc6 A OE2 GLU 99 A GLU 99 1_555 C CA CA . A CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc7 A O GLU 99 A GLU 99 1_555 D CA CA . A CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? metalc ? metalc8 A OE1 GLU 99 A GLU 99 1_555 D CA CA . A CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? metalc ? metalc9 A OE1 GLU 102 A GLU 102 1_555 C CA CA . A CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc10 A OE2 GLU 102 A GLU 102 1_555 C CA CA . A CA 1150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.581 ? metalc ? metalc11 A OE2 GLU 102 A GLU 102 1_555 D CA CA . A CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc12 A NE2 HIS 103 A HIS 103 1_555 D CA CA . A CA 1151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? metalc ? metalc13 C CA CA . A CA 1150 1_555 G O HOH . A HOH 1152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc14 C CA CA . A CA 1150 1_555 G O HOH . A HOH 1153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc15 D CA CA . A CA 1151 1_555 G O HOH . A HOH 1154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? metalc ? metalc16 B OD1 ASP 8 B ASP 8 1_555 F CA CA . B CA 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc17 B OD2 ASP 8 B ASP 8 1_555 F CA CA . B CA 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? metalc ? metalc18 B OE2 GLU 11 B GLU 11 1_555 E CA CA . B CA 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc19 B OE1 GLU 11 B GLU 11 1_555 E CA CA . B CA 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc20 B ND1 HIS 77 B HIS 77 1_555 E CA CA . B CA 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc21 B OE2 GLU 99 B GLU 99 1_555 E CA CA . B CA 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc22 B O GLU 99 B GLU 99 1_555 F CA CA . B CA 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.649 ? metalc ? metalc23 B OE1 GLU 99 B GLU 99 1_555 F CA CA . B CA 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.458 ? metalc ? metalc24 B OE1 GLU 102 B GLU 102 1_555 E CA CA . B CA 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.431 ? metalc ? metalc25 B OE2 GLU 102 B GLU 102 1_555 E CA CA . B CA 2150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc26 B OE2 GLU 102 B GLU 102 1_555 F CA CA . B CA 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc27 B NE2 HIS 103 B HIS 103 1_555 F CA CA . B CA 2151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc28 E CA CA . B CA 2150 1_555 H O HOH . B HOH 2152 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc29 E CA CA . B CA 2150 1_555 H O HOH . B HOH 2153 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc30 F CA CA . B CA 2151 1_555 H O HOH . B HOH 2154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.498 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 2EV5 _atom_sites.fract_transf_matrix[1][1] 0.020125 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001323 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021848 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01341 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 1150 1150 CA CA . D 2 CA A 1 1151 1151 CA CA . E 2 CA B 1 2150 2150 CA CA . F 2 CA B 1 2151 2151 CA CA . G 3 HOH A 1 1152 1 HOH HOH . G 3 HOH A 2 1153 2 HOH HOH . G 3 HOH A 3 1154 3 HOH HOH . G 3 HOH A 4 1155 8 HOH HOH . G 3 HOH A 5 1156 9 HOH HOH . G 3 HOH A 6 1157 12 HOH HOH . G 3 HOH A 7 1158 15 HOH HOH . G 3 HOH A 8 1159 16 HOH HOH . G 3 HOH A 9 1160 17 HOH HOH . G 3 HOH A 10 1161 18 HOH HOH . G 3 HOH A 11 1162 21 HOH HOH . G 3 HOH A 12 1163 22 HOH HOH . G 3 HOH A 13 1164 23 HOH HOH . G 3 HOH A 14 1165 24 HOH HOH . G 3 HOH A 15 1166 25 HOH HOH . G 3 HOH A 16 1167 27 HOH HOH . G 3 HOH A 17 1168 31 HOH HOH . G 3 HOH A 18 1169 32 HOH HOH . G 3 HOH A 19 1170 35 HOH HOH . G 3 HOH A 20 1171 36 HOH HOH . G 3 HOH A 21 1172 38 HOH HOH . G 3 HOH A 22 1173 39 HOH HOH . G 3 HOH A 23 1174 40 HOH HOH . G 3 HOH A 24 1175 43 HOH HOH . G 3 HOH A 25 1176 50 HOH HOH . G 3 HOH A 26 1177 51 HOH HOH . G 3 HOH A 27 1178 52 HOH HOH . G 3 HOH A 28 1179 53 HOH HOH . G 3 HOH A 29 1180 57 HOH HOH . G 3 HOH A 30 1181 58 HOH HOH . G 3 HOH A 31 1182 59 HOH HOH . G 3 HOH A 32 1183 63 HOH HOH . G 3 HOH A 33 1184 66 HOH HOH . G 3 HOH A 34 1185 67 HOH HOH . G 3 HOH A 35 1186 68 HOH HOH . G 3 HOH A 36 1187 70 HOH HOH . G 3 HOH A 37 1188 72 HOH HOH . G 3 HOH A 38 1189 73 HOH HOH . G 3 HOH A 39 1190 76 HOH HOH . G 3 HOH A 40 1191 79 HOH HOH . G 3 HOH A 41 1192 80 HOH HOH . G 3 HOH A 42 1193 81 HOH HOH . G 3 HOH A 43 1194 83 HOH HOH . G 3 HOH A 44 1195 84 HOH HOH . G 3 HOH A 45 1196 85 HOH HOH . G 3 HOH A 46 1197 88 HOH HOH . H 3 HOH B 1 2152 4 HOH HOH . H 3 HOH B 2 2153 5 HOH HOH . H 3 HOH B 3 2154 6 HOH HOH . H 3 HOH B 4 2155 7 HOH HOH . H 3 HOH B 5 2156 10 HOH HOH . H 3 HOH B 6 2157 11 HOH HOH . H 3 HOH B 7 2158 13 HOH HOH . H 3 HOH B 8 2159 14 HOH HOH . H 3 HOH B 9 2160 19 HOH HOH . H 3 HOH B 10 2161 20 HOH HOH . H 3 HOH B 11 2162 26 HOH HOH . H 3 HOH B 12 2163 28 HOH HOH . H 3 HOH B 13 2164 29 HOH HOH . H 3 HOH B 14 2165 30 HOH HOH . H 3 HOH B 15 2166 33 HOH HOH . H 3 HOH B 16 2167 34 HOH HOH . H 3 HOH B 17 2168 37 HOH HOH . H 3 HOH B 18 2169 41 HOH HOH . H 3 HOH B 19 2170 42 HOH HOH . H 3 HOH B 20 2171 44 HOH HOH . H 3 HOH B 21 2172 45 HOH HOH . H 3 HOH B 22 2173 46 HOH HOH . H 3 HOH B 23 2174 47 HOH HOH . H 3 HOH B 24 2175 48 HOH HOH . H 3 HOH B 25 2176 49 HOH HOH . H 3 HOH B 26 2177 54 HOH HOH . H 3 HOH B 27 2178 55 HOH HOH . H 3 HOH B 28 2179 56 HOH HOH . H 3 HOH B 29 2180 60 HOH HOH . H 3 HOH B 30 2181 61 HOH HOH . H 3 HOH B 31 2182 62 HOH HOH . H 3 HOH B 32 2183 64 HOH HOH . H 3 HOH B 33 2184 65 HOH HOH . H 3 HOH B 34 2185 69 HOH HOH . H 3 HOH B 35 2186 71 HOH HOH . H 3 HOH B 36 2187 74 HOH HOH . H 3 HOH B 37 2188 75 HOH HOH . H 3 HOH B 38 2189 77 HOH HOH . H 3 HOH B 39 2190 78 HOH HOH . H 3 HOH B 40 2191 82 HOH HOH . H 3 HOH B 41 2192 86 HOH HOH . H 3 HOH B 42 2193 87 HOH HOH . H 3 HOH B 43 2194 89 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 27.3 _atom_site.Cartn_y 25.975 _atom_site.Cartn_z 26.73 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 30.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1151 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #