data_2EX3
#
_model_server_result.job_id            OX4a_PE-MYDtG6lGWU4kVg 
_model_server_result.datetime_utc      '2025-02-05 10:51:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          2ex3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":705}' 
#
_entry.id    2EX3 
#
_exptl.entry_id    2EX3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              207.2 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'LEAD (II) ION' 
_entity.pdbx_number_of_molecules    16 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          45.4 
_cell.angle_gamma         90 
_cell.entry_id            2EX3 
_cell.length_a            304.933 
_cell.length_b            220.281 
_cell.length_c            217.165 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 2EX3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
PISA dimeric 2 author_and_software_defined_assembly 5 
PISA dimeric 2 author_and_software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,M,N,O 1 1 
C,D,P,Q,R 2 1 
E,F,S,T,U 3 1 
G,H,V,W,X 4 1 
I,J,Y,Z 5 1 
K,L,AA,BA 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 V N N 
? 3 W N N 
? 3 X N N 
? 3 Y N N 
? 3 Z N N 
? 3 AA N N 
? 3 BA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 14 A GLU 14 1_555 N PB PB . A PB 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.156 ? 
metalc ? metalc2 A OD1 ASP 145 A ASP 145 1_555 N PB PB . A PB 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.466 ? 
metalc ? metalc3 A OH TYR 148 A TYR 148 1_555 N PB PB . A PB 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.44 ? 
metalc ? metalc4 A OD1 ASP 169 A ASP 169 1_555 M PB PB . A PB 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc5 A OD2 ASP 169 A ASP 169 1_555 M PB PB . A PB 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.402 ? 
metalc ? metalc6 A OD2 ASP 169 A ASP 169 1_555 N PB PB . A PB 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.025 ? 
metalc ? metalc7 A OE1 GLU 221 A GLU 221 1_555 O PB PB . A PB 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.163 ? 
metalc ? metalc8 A OE2 GLU 221 A GLU 221 1_555 O PB PB . A PB 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.9 ? 
metalc ? metalc9 C OE2 GLU 14 C GLU 14 1_555 Q PB PB . C PB 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.13 ? 
metalc ? metalc10 C OD1 ASP 169 C ASP 169 1_555 P PB PB . C PB 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? 
metalc ? metalc11 C OD2 ASP 169 C ASP 169 1_555 P PB PB . C PB 704 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.04 ? 
metalc ? metalc12 C OD2 ASP 169 C ASP 169 1_555 Q PB PB . C PB 705 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.08 ? 
metalc ? metalc13 E OE2 GLU 14 E GLU 14 1_555 S PB PB . E PB 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.878 ? 
metalc ? metalc14 E OD1 ASP 169 E ASP 169 1_555 S PB PB . E PB 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.448 ? 
metalc ? metalc15 E OD2 ASP 169 E ASP 169 1_555 S PB PB . E PB 707 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.181 ? 
metalc ? metalc16 E OD1 ASP 169 E ASP 169 1_555 T PB PB . E PB 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? 
metalc ? metalc17 E OD2 ASP 169 E ASP 169 1_555 T PB PB . E PB 708 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.12 ? 
metalc ? metalc18 G OE2 GLU 14 G GLU 14 1_555 W PB PB . G PB 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.302 ? 
metalc ? metalc19 G OD1 ASP 145 G ASP 145 1_555 W PB PB . G PB 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.35 ? 
metalc ? metalc20 G OD2 ASP 169 G ASP 169 1_555 V PB PB . G PB 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.469 ? 
metalc ? metalc21 G OD1 ASP 169 G ASP 169 1_555 V PB PB . G PB 710 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? 
metalc ? metalc22 G OD2 ASP 169 G ASP 169 1_555 W PB PB . G PB 711 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.716 ? 
metalc ? metalc23 G OE2 GLU 221 G GLU 221 1_555 X PB PB . G PB 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.597 ? 
metalc ? metalc24 G OE1 GLU 221 G GLU 221 1_555 X PB PB . G PB 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.228 ? 
metalc ? metalc25 I OE2 GLU 14 I GLU 14 1_555 Z PB PB . I PB 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? 
metalc ? metalc26 I OD1 ASP 169 I ASP 169 1_555 Y PB PB . I PB 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? 
metalc ? metalc27 I OD2 ASP 169 I ASP 169 1_555 Y PB PB . I PB 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.335 ? 
metalc ? metalc28 I OD2 ASP 169 I ASP 169 1_555 Z PB PB . I PB 714 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.578 ? 
metalc ? metalc29 K OE2 GLU 14 K GLU 14 1_555 AA PB PB . K PB 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.754 ? 
metalc ? metalc30 K OD1 ASP 169 K ASP 169 1_555 AA PB PB . K PB 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.439 ? 
metalc ? metalc31 K OD2 ASP 169 K ASP 169 1_555 AA PB PB . K PB 715 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.161 ? 
metalc ? metalc32 K OD2 ASP 169 K ASP 169 1_555 BA PB PB . K PB 716 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.243 ? 
metalc ? metalc33 K OD1 ASP 169 K ASP 169 1_555 BA PB PB . K PB 716 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.642 ? 
#
_chem_comp.formula           'Pb 2' 
_chem_comp.formula_weight    207.2 
_chem_comp.id                PB 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'LEAD (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     2EX3 
_atom_sites.fract_transf_matrix[1][1]    0.00328 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    -0.00323 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00454 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00647 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 3 PB A 1 701 701 PB PB . 
N 3 PB A 1 702 702 PB PB . 
O 3 PB A 1 703 703 PB PB . 
P 3 PB C 1 704 704 PB PB . 
Q 3 PB C 1 705 705 PB PB . 
R 3 PB C 1 706 706 PB PB . 
S 3 PB E 1 707 707 PB PB . 
T 3 PB E 1 708 708 PB PB . 
U 3 PB E 1 709 709 PB PB . 
V 3 PB G 1 710 710 PB PB . 
W 3 PB G 1 711 711 PB PB . 
X 3 PB G 1 712 712 PB PB . 
Y 3 PB I 1 713 713 PB PB . 
Z 3 PB I 1 714 714 PB PB . 
AA 3 PB K 1 715 715 PB PB . 
BA 3 PB K 1 716 716 PB PB . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           PB 
_atom_site.label_atom_id         PB 
_atom_site.label_comp_id         PB 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         Q 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -40.069 
_atom_site.Cartn_y               36.492 
_atom_site.Cartn_z               -127.727 
_atom_site.occupancy             0.4 
_atom_site.B_iso_or_equiv        162.43 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          PB 
_atom_site.auth_comp_id          PB 
_atom_site.auth_seq_id           705 
_atom_site.auth_asym_id          C 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           242 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#