data_2EXC # _model_server_result.job_id 9nN8MkFNEs8LFqbl2A9FNA _model_server_result.datetime_utc '2024-11-04 23:08:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2exc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":600}' # _entry.id 2EXC # _exptl.entry_id 2EXC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 420.479 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N-{2'-[(4-FLUOROPHENYL)AMINO]-4,4'-BIPYRIDIN-2-YL}-4-METHOXYCYCLOHEXANECARBOXAMIDE" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2EXC _cell.length_a 49.578 _cell.length_b 72.231 _cell.length_c 106.155 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EXC _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H25 F N4 O2' _chem_comp.formula_weight 420.479 _chem_comp.id JNK _chem_comp.mon_nstd_flag . _chem_comp.name "N-{2'-[(4-FLUOROPHENYL)AMINO]-4,4'-BIPYRIDIN-2-YL}-4-METHOXYCYCLOHEXANECARBOXAMIDE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "4-METHOXY-CYCLOHEXANECARBOXYLIC ACID [2'-(4-FLUORO-PHENYLAMINO)-[4,4'] BIPYRIDINYL-2-YL]-AMIDE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 JNK sing 173 n y C1 C3 JNK doub 174 n y C1 C4 JNK sing 175 n y C2 C5 JNK sing 176 n y C2 C6 JNK doub 177 n y C3 C7 JNK sing 178 n y C3 H3 JNK sing 179 n n C4 C8 JNK doub 180 n y C4 H4 JNK sing 181 n n C5 C9 JNK doub 182 n y C5 H5 JNK sing 183 n n C6 C10 JNK sing 184 n y C6 H6 JNK sing 185 n n C7 N11 JNK sing 186 n n C7 N12 JNK doub 187 n y C8 N12 JNK sing 188 n y C8 H8 JNK sing 189 n n C9 N13 JNK sing 190 n n C9 N14 JNK sing 191 n y C10 N14 JNK doub 192 n y C10 H10 JNK sing 193 n n N11 C15 JNK sing 194 n n N11 H11 JNK sing 195 n n N13 C16 JNK sing 196 n n N13 H13 JNK sing 197 n n C15 C17 JNK doub 198 n y C15 C18 JNK sing 199 n y C16 C19 JNK sing 200 n n C16 O20 JNK doub 201 n n C17 C21 JNK sing 202 n y C17 H17 JNK sing 203 n n C18 C22 JNK doub 204 n y C18 H18 JNK sing 205 n n C19 C23 JNK sing 206 n n C19 C24 JNK sing 207 n n C19 H19 JNK sing 208 n n C21 C25 JNK doub 209 n y C21 H21 JNK sing 210 n n C22 C25 JNK sing 211 n y C22 H22 JNK sing 212 n n C23 C26 JNK sing 213 n n C23 H231 JNK sing 214 n n C23 H232 JNK sing 215 n n C24 C27 JNK sing 216 n n C24 H241 JNK sing 217 n n C24 H242 JNK sing 218 n n C25 F31 JNK sing 219 n n C26 C28 JNK sing 220 n n C26 H261 JNK sing 221 n n C26 H262 JNK sing 222 n n C27 C28 JNK sing 223 n n C27 H271 JNK sing 224 n n C27 H272 JNK sing 225 n n C28 O29 JNK sing 226 n n C28 H28 JNK sing 227 n n O29 C30 JNK sing 228 n n C30 H301 JNK sing 229 n n C30 H302 JNK sing 230 n n C30 H303 JNK sing 231 n n # _atom_sites.entry_id 2EXC _atom_sites.fract_transf_matrix[1][1] 0.02017 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01384 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00942 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JNK X 1 600 600 JNK JNK . C 3 HOH X 1 501 501 HOH HOH . C 3 HOH X 2 502 502 HOH HOH . C 3 HOH X 3 503 503 HOH HOH . C 3 HOH X 4 504 504 HOH HOH . C 3 HOH X 5 505 505 HOH HOH . C 3 HOH X 6 506 506 HOH HOH . C 3 HOH X 7 507 507 HOH HOH . C 3 HOH X 8 508 508 HOH HOH . C 3 HOH X 9 509 509 HOH HOH . C 3 HOH X 10 510 510 HOH HOH . C 3 HOH X 11 511 511 HOH HOH . C 3 HOH X 12 512 512 HOH HOH . C 3 HOH X 13 513 513 HOH HOH . C 3 HOH X 14 514 514 HOH HOH . C 3 HOH X 15 515 515 HOH HOH . C 3 HOH X 16 516 516 HOH HOH . C 3 HOH X 17 517 517 HOH HOH . C 3 HOH X 18 518 518 HOH HOH . C 3 HOH X 19 519 519 HOH HOH . C 3 HOH X 20 520 520 HOH HOH . C 3 HOH X 21 521 521 HOH HOH . C 3 HOH X 22 522 522 HOH HOH . C 3 HOH X 23 523 523 HOH HOH . C 3 HOH X 24 524 524 HOH HOH . C 3 HOH X 25 525 525 HOH HOH . C 3 HOH X 26 526 526 HOH HOH . C 3 HOH X 27 527 527 HOH HOH . C 3 HOH X 28 528 528 HOH HOH . C 3 HOH X 29 529 529 HOH HOH . C 3 HOH X 30 530 530 HOH HOH . C 3 HOH X 31 531 531 HOH HOH . C 3 HOH X 32 532 532 HOH HOH . C 3 HOH X 33 533 533 HOH HOH . C 3 HOH X 34 534 534 HOH HOH . C 3 HOH X 35 535 535 HOH HOH . C 3 HOH X 36 536 536 HOH HOH . C 3 HOH X 37 537 537 HOH HOH . C 3 HOH X 38 538 538 HOH HOH . C 3 HOH X 39 539 539 HOH HOH . C 3 HOH X 40 540 540 HOH HOH . C 3 HOH X 41 541 541 HOH HOH . C 3 HOH X 42 542 542 HOH HOH . C 3 HOH X 43 543 543 HOH HOH . C 3 HOH X 44 544 544 HOH HOH . C 3 HOH X 45 545 545 HOH HOH . C 3 HOH X 46 546 546 HOH HOH . C 3 HOH X 47 547 547 HOH HOH . C 3 HOH X 48 548 548 HOH HOH . C 3 HOH X 49 549 549 HOH HOH . C 3 HOH X 50 550 550 HOH HOH . C 3 HOH X 51 551 551 HOH HOH . C 3 HOH X 52 552 552 HOH HOH . C 3 HOH X 53 553 553 HOH HOH . C 3 HOH X 54 554 554 HOH HOH . C 3 HOH X 55 555 555 HOH HOH . C 3 HOH X 56 556 556 HOH HOH . C 3 HOH X 57 557 557 HOH HOH . C 3 HOH X 58 558 558 HOH HOH . C 3 HOH X 59 559 559 HOH HOH . C 3 HOH X 60 560 560 HOH HOH . C 3 HOH X 61 561 561 HOH HOH . C 3 HOH X 62 562 562 HOH HOH . C 3 HOH X 63 563 563 HOH HOH . C 3 HOH X 64 564 564 HOH HOH . C 3 HOH X 65 565 565 HOH HOH . C 3 HOH X 66 566 566 HOH HOH . C 3 HOH X 67 567 567 HOH HOH . C 3 HOH X 68 568 568 HOH HOH . C 3 HOH X 69 569 569 HOH HOH . C 3 HOH X 70 570 570 HOH HOH . C 3 HOH X 71 571 571 HOH HOH . C 3 HOH X 72 572 572 HOH HOH . C 3 HOH X 73 573 573 HOH HOH . C 3 HOH X 74 574 574 HOH HOH . C 3 HOH X 75 575 575 HOH HOH . C 3 HOH X 76 576 576 HOH HOH . C 3 HOH X 77 577 577 HOH HOH . C 3 HOH X 78 578 578 HOH HOH . C 3 HOH X 79 579 579 HOH HOH . C 3 HOH X 80 580 580 HOH HOH . C 3 HOH X 81 581 581 HOH HOH . C 3 HOH X 82 582 582 HOH HOH . C 3 HOH X 83 583 583 HOH HOH . C 3 HOH X 84 584 584 HOH HOH . C 3 HOH X 85 585 585 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JNK . . . B 2 20.359 9.819 31.781 1 33.66 ? C1 JNK 600 X 1 HETATM 2 C C2 JNK . . . B 2 19.976 8.376 31.864 1 32.34 ? C2 JNK 600 X 1 HETATM 3 C C3 JNK . . . B 2 19.636 10.823 32.447 1 35.72 ? C3 JNK 600 X 1 HETATM 4 C C4 JNK . . . B 2 21.436 10.213 30.971 1 32.86 ? C4 JNK 600 X 1 HETATM 5 C C5 JNK . . . B 2 20.903 7.394 31.531 1 31.02 ? C5 JNK 600 X 1 HETATM 6 C C6 JNK . . . B 2 18.677 7.966 32.218 1 31.44 ? C6 JNK 600 X 1 HETATM 7 C C7 JNK . . . B 2 20.023 12.158 32.298 1 36.26 ? C7 JNK 600 X 1 HETATM 8 C C8 JNK . . . B 2 21.761 11.542 30.862 1 32.58 ? C8 JNK 600 X 1 HETATM 9 C C9 JNK . . . B 2 20.552 6.06 31.535 1 31.82 ? C9 JNK 600 X 1 HETATM 10 C C10 JNK . . . B 2 18.401 6.615 32.243 1 31.51 ? C10 JNK 600 X 1 HETATM 11 N N11 JNK . . . B 2 19.345 13.213 32.941 1 37.2 ? N11 JNK 600 X 1 HETATM 12 N N12 JNK . . . B 2 21.065 12.452 31.515 1 35.03 ? N12 JNK 600 X 1 HETATM 13 N N13 JNK . . . B 2 21.533 5.081 31.299 1 36.3 ? N13 JNK 600 X 1 HETATM 14 N N14 JNK . . . B 2 19.333 5.729 31.926 1 32.36 ? N14 JNK 600 X 1 HETATM 15 C C15 JNK . . . B 2 18.347 13.067 33.923 1 38.19 ? C15 JNK 600 X 1 HETATM 16 C C16 JNK . . . B 2 22.808 5.319 30.829 1 39.36 ? C16 JNK 600 X 1 HETATM 17 C C17 JNK . . . B 2 17.154 13.809 33.817 1 37.4 ? C17 JNK 600 X 1 HETATM 18 C C18 JNK . . . B 2 18.54 12.201 35.014 1 38.39 ? C18 JNK 600 X 1 HETATM 19 C C19 JNK . . . B 2 23.845 4.221 30.752 1 40.62 ? C19 JNK 600 X 1 HETATM 20 O O20 JNK . . . B 2 23.179 6.435 30.487 1 39.5 ? O20 JNK 600 X 1 HETATM 21 C C21 JNK . . . B 2 16.177 13.651 34.804 1 38.73 ? C21 JNK 600 X 1 HETATM 22 C C22 JNK . . . B 2 17.552 12.049 35.987 1 39.66 ? C22 JNK 600 X 1 HETATM 23 C C23 JNK . . . B 2 23.42 2.963 31.527 1 42.24 ? C23 JNK 600 X 1 HETATM 24 C C24 JNK . . . B 2 24.394 3.874 29.359 1 42.11 ? C24 JNK 600 X 1 HETATM 25 C C25 JNK . . . B 2 16.357 12.772 35.892 1 39.65 ? C25 JNK 600 X 1 HETATM 26 C C26 JNK . . . B 2 24.663 2.083 31.792 1 46.2 ? C26 JNK 600 X 1 HETATM 27 C C27 JNK . . . B 2 25.589 2.894 29.6 1 44.27 ? C27 JNK 600 X 1 HETATM 28 C C28 JNK . . . B 2 25.926 2.467 30.963 1 46.11 ? C28 JNK 600 X 1 HETATM 29 O O29 JNK . . . B 2 26.715 3.467 31.66 1 46.76 ? O29 JNK 600 X 1 HETATM 30 C C30 JNK . . . B 2 28.134 3.199 31.677 1 48.27 ? C30 JNK 600 X 1 HETATM 31 F F31 JNK . . . B 2 15.397 12.624 36.852 1 38.78 ? F31 JNK 600 X 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 31 #