data_2EXL # _model_server_result.job_id r6YRwBfAJgdmI3T01PPOow _model_server_result.datetime_utc '2024-11-16 13:23:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2exl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":501}' # _entry.id 2EXL # _exptl.entry_id 2EXL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2EXL _cell.length_a 65.82 _cell.length_b 84.36 _cell.length_c 95.63 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EXL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 355 n n O1 HO1 PG4 sing 356 n n C1 C2 PG4 sing 357 n n C1 H11 PG4 sing 358 n n C1 H12 PG4 sing 359 n n C2 O2 PG4 sing 360 n n C2 H21 PG4 sing 361 n n C2 H22 PG4 sing 362 n n O2 C3 PG4 sing 363 n n C3 C4 PG4 sing 364 n n C3 H31 PG4 sing 365 n n C3 H32 PG4 sing 366 n n C4 O3 PG4 sing 367 n n C4 H41 PG4 sing 368 n n C4 H42 PG4 sing 369 n n O3 C5 PG4 sing 370 n n C5 C6 PG4 sing 371 n n C5 H51 PG4 sing 372 n n C5 H52 PG4 sing 373 n n C6 O4 PG4 sing 374 n n C6 H61 PG4 sing 375 n n C6 H62 PG4 sing 376 n n O4 C7 PG4 sing 377 n n C7 C8 PG4 sing 378 n n C7 H71 PG4 sing 379 n n C7 H72 PG4 sing 380 n n C8 O5 PG4 sing 381 n n C8 H81 PG4 sing 382 n n C8 H82 PG4 sing 383 n n O5 HO5 PG4 sing 384 n n # _atom_sites.entry_id 2EXL _atom_sites.fract_transf_matrix[1][1] 0.015193 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011854 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010457 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GDM A 1 301 1 GDM GMY . D 3 PG4 A 1 501 501 PG4 PG4 . E 3 PG4 A 1 502 502 PG4 PG4 . F 4 1PE A 1 409 409 1PE 1PE . G 2 GDM B 1 302 2 GDM GMY . H 3 PG4 B 1 508 508 PG4 PG4 . I 3 PG4 B 1 406 406 PG4 PG4 . J 5 HOH A 1 503 2 HOH HOH . J 5 HOH A 2 504 3 HOH HOH . J 5 HOH A 3 505 4 HOH HOH . J 5 HOH A 4 506 6 HOH HOH . J 5 HOH A 5 507 9 HOH HOH . J 5 HOH A 6 508 10 HOH HOH . J 5 HOH A 7 509 13 HOH HOH . J 5 HOH A 8 510 14 HOH HOH . J 5 HOH A 9 511 16 HOH HOH . J 5 HOH A 10 512 17 HOH HOH . J 5 HOH A 11 513 20 HOH HOH . J 5 HOH A 12 514 23 HOH HOH . J 5 HOH A 13 515 26 HOH HOH . J 5 HOH A 14 516 29 HOH HOH . J 5 HOH A 15 517 31 HOH HOH . J 5 HOH A 16 518 33 HOH HOH . J 5 HOH A 17 519 40 HOH HOH . J 5 HOH A 18 520 41 HOH HOH . J 5 HOH A 19 521 42 HOH HOH . J 5 HOH A 20 522 43 HOH HOH . J 5 HOH A 21 523 47 HOH HOH . J 5 HOH A 22 524 48 HOH HOH . J 5 HOH A 23 525 50 HOH HOH . J 5 HOH A 24 526 52 HOH HOH . J 5 HOH A 25 527 53 HOH HOH . J 5 HOH A 26 528 55 HOH HOH . J 5 HOH A 27 529 59 HOH HOH . J 5 HOH A 28 530 61 HOH HOH . J 5 HOH A 29 531 62 HOH HOH . J 5 HOH A 30 532 65 HOH HOH . J 5 HOH A 31 533 66 HOH HOH . J 5 HOH A 32 534 67 HOH HOH . J 5 HOH A 33 535 68 HOH HOH . J 5 HOH A 34 536 72 HOH HOH . J 5 HOH A 35 537 74 HOH HOH . J 5 HOH A 36 538 77 HOH HOH . J 5 HOH A 37 539 79 HOH HOH . J 5 HOH A 38 540 80 HOH HOH . J 5 HOH A 39 541 82 HOH HOH . J 5 HOH A 40 542 83 HOH HOH . J 5 HOH A 41 543 85 HOH HOH . J 5 HOH A 42 544 88 HOH HOH . J 5 HOH A 43 545 89 HOH HOH . J 5 HOH A 44 546 90 HOH HOH . J 5 HOH A 45 547 91 HOH HOH . J 5 HOH A 46 548 93 HOH HOH . J 5 HOH A 47 549 94 HOH HOH . J 5 HOH A 48 550 95 HOH HOH . J 5 HOH A 49 551 97 HOH HOH . J 5 HOH A 50 552 98 HOH HOH . J 5 HOH A 51 553 103 HOH HOH . J 5 HOH A 52 554 104 HOH HOH . J 5 HOH A 53 555 105 HOH HOH . J 5 HOH A 54 556 106 HOH HOH . J 5 HOH A 55 557 113 HOH HOH . J 5 HOH A 56 558 120 HOH HOH . J 5 HOH A 57 559 121 HOH HOH . J 5 HOH A 58 560 122 HOH HOH . J 5 HOH A 59 561 124 HOH HOH . J 5 HOH A 60 562 126 HOH HOH . J 5 HOH A 61 563 129 HOH HOH . J 5 HOH A 62 564 131 HOH HOH . J 5 HOH A 63 565 137 HOH HOH . J 5 HOH A 64 566 138 HOH HOH . J 5 HOH A 65 567 140 HOH HOH . J 5 HOH A 66 568 144 HOH HOH . J 5 HOH A 67 569 147 HOH HOH . J 5 HOH A 68 570 148 HOH HOH . J 5 HOH A 69 571 149 HOH HOH . J 5 HOH A 70 572 151 HOH HOH . J 5 HOH A 71 573 153 HOH HOH . J 5 HOH A 72 574 155 HOH HOH . J 5 HOH A 73 575 156 HOH HOH . J 5 HOH A 74 576 157 HOH HOH . J 5 HOH A 75 577 158 HOH HOH . J 5 HOH A 76 578 160 HOH HOH . J 5 HOH A 77 579 165 HOH HOH . J 5 HOH A 78 580 170 HOH HOH . J 5 HOH A 79 581 171 HOH HOH . J 5 HOH A 80 582 176 HOH HOH . J 5 HOH A 81 583 177 HOH HOH . J 5 HOH A 82 584 179 HOH HOH . J 5 HOH A 83 585 181 HOH HOH . J 5 HOH A 84 586 182 HOH HOH . J 5 HOH A 85 587 184 HOH HOH . J 5 HOH A 86 588 186 HOH HOH . J 5 HOH A 87 589 187 HOH HOH . J 5 HOH A 88 590 190 HOH HOH . J 5 HOH A 89 591 191 HOH HOH . J 5 HOH A 90 592 195 HOH HOH . J 5 HOH A 91 593 197 HOH HOH . J 5 HOH A 92 594 198 HOH HOH . J 5 HOH A 93 595 199 HOH HOH . J 5 HOH A 94 596 200 HOH HOH . J 5 HOH A 95 597 201 HOH HOH . J 5 HOH A 96 598 202 HOH HOH . J 5 HOH A 97 599 205 HOH HOH . J 5 HOH A 98 600 206 HOH HOH . J 5 HOH A 99 601 213 HOH HOH . J 5 HOH A 100 602 217 HOH HOH . J 5 HOH A 101 603 218 HOH HOH . J 5 HOH A 102 604 219 HOH HOH . J 5 HOH A 103 605 220 HOH HOH . J 5 HOH A 104 606 221 HOH HOH . J 5 HOH A 105 607 222 HOH HOH . J 5 HOH A 106 608 225 HOH HOH . J 5 HOH A 107 609 228 HOH HOH . J 5 HOH A 108 610 229 HOH HOH . J 5 HOH A 109 611 231 HOH HOH . J 5 HOH A 110 612 234 HOH HOH . J 5 HOH A 111 613 236 HOH HOH . J 5 HOH A 112 614 237 HOH HOH . J 5 HOH A 113 615 238 HOH HOH . J 5 HOH A 114 616 239 HOH HOH . J 5 HOH A 115 617 243 HOH HOH . J 5 HOH A 116 618 247 HOH HOH . J 5 HOH A 117 619 250 HOH HOH . J 5 HOH A 118 620 251 HOH HOH . J 5 HOH A 119 621 252 HOH HOH . J 5 HOH A 120 622 258 HOH HOH . J 5 HOH A 121 623 264 HOH HOH . J 5 HOH A 122 624 265 HOH HOH . J 5 HOH A 123 625 267 HOH HOH . J 5 HOH A 124 626 268 HOH HOH . J 5 HOH A 125 627 269 HOH HOH . J 5 HOH A 126 628 270 HOH HOH . J 5 HOH A 127 629 272 HOH HOH . J 5 HOH A 128 630 273 HOH HOH . J 5 HOH A 129 631 274 HOH HOH . J 5 HOH A 130 632 275 HOH HOH . J 5 HOH A 131 633 278 HOH HOH . J 5 HOH A 132 634 279 HOH HOH . J 5 HOH A 133 635 280 HOH HOH . J 5 HOH A 134 636 282 HOH HOH . K 5 HOH B 1 509 1 HOH HOH . K 5 HOH B 2 510 5 HOH HOH . K 5 HOH B 3 511 7 HOH HOH . K 5 HOH B 4 512 8 HOH HOH . K 5 HOH B 5 513 11 HOH HOH . K 5 HOH B 6 514 12 HOH HOH . K 5 HOH B 7 515 15 HOH HOH . K 5 HOH B 8 516 18 HOH HOH . K 5 HOH B 9 517 19 HOH HOH . K 5 HOH B 10 518 21 HOH HOH . K 5 HOH B 11 519 22 HOH HOH . K 5 HOH B 12 520 24 HOH HOH . K 5 HOH B 13 521 25 HOH HOH . K 5 HOH B 14 522 27 HOH HOH . K 5 HOH B 15 523 28 HOH HOH . K 5 HOH B 16 524 30 HOH HOH . K 5 HOH B 17 525 32 HOH HOH . K 5 HOH B 18 526 34 HOH HOH . K 5 HOH B 19 527 35 HOH HOH . K 5 HOH B 20 528 36 HOH HOH . K 5 HOH B 21 529 37 HOH HOH . K 5 HOH B 22 530 38 HOH HOH . K 5 HOH B 23 531 39 HOH HOH . K 5 HOH B 24 532 44 HOH HOH . K 5 HOH B 25 533 45 HOH HOH . K 5 HOH B 26 534 46 HOH HOH . K 5 HOH B 27 535 49 HOH HOH . K 5 HOH B 28 536 51 HOH HOH . K 5 HOH B 29 537 54 HOH HOH . K 5 HOH B 30 538 56 HOH HOH . K 5 HOH B 31 539 57 HOH HOH . K 5 HOH B 32 540 58 HOH HOH . K 5 HOH B 33 541 60 HOH HOH . K 5 HOH B 34 542 63 HOH HOH . K 5 HOH B 35 543 64 HOH HOH . K 5 HOH B 36 544 69 HOH HOH . K 5 HOH B 37 545 70 HOH HOH . K 5 HOH B 38 546 71 HOH HOH . K 5 HOH B 39 547 73 HOH HOH . K 5 HOH B 40 548 75 HOH HOH . K 5 HOH B 41 549 76 HOH HOH . K 5 HOH B 42 550 78 HOH HOH . K 5 HOH B 43 551 81 HOH HOH . K 5 HOH B 44 552 84 HOH HOH . K 5 HOH B 45 553 86 HOH HOH . K 5 HOH B 46 554 87 HOH HOH . K 5 HOH B 47 555 92 HOH HOH . K 5 HOH B 48 556 96 HOH HOH . K 5 HOH B 49 557 99 HOH HOH . K 5 HOH B 50 558 100 HOH HOH . K 5 HOH B 51 559 101 HOH HOH . K 5 HOH B 52 560 102 HOH HOH . K 5 HOH B 53 561 107 HOH HOH . K 5 HOH B 54 562 108 HOH HOH . K 5 HOH B 55 563 109 HOH HOH . K 5 HOH B 56 564 110 HOH HOH . K 5 HOH B 57 565 111 HOH HOH . K 5 HOH B 58 566 112 HOH HOH . K 5 HOH B 59 567 114 HOH HOH . K 5 HOH B 60 568 115 HOH HOH . K 5 HOH B 61 569 116 HOH HOH . K 5 HOH B 62 570 117 HOH HOH . K 5 HOH B 63 571 118 HOH HOH . K 5 HOH B 64 572 119 HOH HOH . K 5 HOH B 65 573 123 HOH HOH . K 5 HOH B 66 574 125 HOH HOH . K 5 HOH B 67 575 127 HOH HOH . K 5 HOH B 68 576 128 HOH HOH . K 5 HOH B 69 577 130 HOH HOH . K 5 HOH B 70 578 132 HOH HOH . K 5 HOH B 71 579 133 HOH HOH . K 5 HOH B 72 580 134 HOH HOH . K 5 HOH B 73 581 135 HOH HOH . K 5 HOH B 74 582 136 HOH HOH . K 5 HOH B 75 583 139 HOH HOH . K 5 HOH B 76 584 141 HOH HOH . K 5 HOH B 77 585 142 HOH HOH . K 5 HOH B 78 586 143 HOH HOH . K 5 HOH B 79 587 145 HOH HOH . K 5 HOH B 80 588 146 HOH HOH . K 5 HOH B 81 589 150 HOH HOH . K 5 HOH B 82 590 152 HOH HOH . K 5 HOH B 83 591 154 HOH HOH . K 5 HOH B 84 592 159 HOH HOH . K 5 HOH B 85 593 161 HOH HOH . K 5 HOH B 86 594 162 HOH HOH . K 5 HOH B 87 595 163 HOH HOH . K 5 HOH B 88 596 164 HOH HOH . K 5 HOH B 89 597 166 HOH HOH . K 5 HOH B 90 598 167 HOH HOH . K 5 HOH B 91 599 168 HOH HOH . K 5 HOH B 92 600 169 HOH HOH . K 5 HOH B 93 601 172 HOH HOH . K 5 HOH B 94 602 173 HOH HOH . K 5 HOH B 95 603 174 HOH HOH . K 5 HOH B 96 604 175 HOH HOH . K 5 HOH B 97 605 178 HOH HOH . K 5 HOH B 98 606 180 HOH HOH . K 5 HOH B 99 607 183 HOH HOH . K 5 HOH B 100 608 185 HOH HOH . K 5 HOH B 101 609 188 HOH HOH . K 5 HOH B 102 610 189 HOH HOH . K 5 HOH B 103 611 192 HOH HOH . K 5 HOH B 104 612 193 HOH HOH . K 5 HOH B 105 613 194 HOH HOH . K 5 HOH B 106 614 196 HOH HOH . K 5 HOH B 107 615 203 HOH HOH . K 5 HOH B 108 616 204 HOH HOH . K 5 HOH B 109 617 207 HOH HOH . K 5 HOH B 110 618 208 HOH HOH . K 5 HOH B 111 619 209 HOH HOH . K 5 HOH B 112 620 210 HOH HOH . K 5 HOH B 113 621 211 HOH HOH . K 5 HOH B 114 622 212 HOH HOH . K 5 HOH B 115 623 214 HOH HOH . K 5 HOH B 116 624 215 HOH HOH . K 5 HOH B 117 625 216 HOH HOH . K 5 HOH B 118 626 223 HOH HOH . K 5 HOH B 119 627 224 HOH HOH . K 5 HOH B 120 628 226 HOH HOH . K 5 HOH B 121 629 227 HOH HOH . K 5 HOH B 122 630 230 HOH HOH . K 5 HOH B 123 631 232 HOH HOH . K 5 HOH B 124 632 233 HOH HOH . K 5 HOH B 125 633 235 HOH HOH . K 5 HOH B 126 634 240 HOH HOH . K 5 HOH B 127 635 241 HOH HOH . K 5 HOH B 128 636 242 HOH HOH . K 5 HOH B 129 637 244 HOH HOH . K 5 HOH B 130 638 245 HOH HOH . K 5 HOH B 131 639 246 HOH HOH . K 5 HOH B 132 640 248 HOH HOH . K 5 HOH B 133 641 249 HOH HOH . K 5 HOH B 134 642 253 HOH HOH . K 5 HOH B 135 643 254 HOH HOH . K 5 HOH B 136 644 255 HOH HOH . K 5 HOH B 137 645 256 HOH HOH . K 5 HOH B 138 646 257 HOH HOH . K 5 HOH B 139 647 259 HOH HOH . K 5 HOH B 140 648 260 HOH HOH . K 5 HOH B 141 649 261 HOH HOH . K 5 HOH B 142 650 262 HOH HOH . K 5 HOH B 143 651 263 HOH HOH . K 5 HOH B 144 652 266 HOH HOH . K 5 HOH B 145 653 271 HOH HOH . K 5 HOH B 146 654 276 HOH HOH . K 5 HOH B 147 655 277 HOH HOH . K 5 HOH B 148 656 281 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 3 35.313 3.225 6.802 1 46.27 ? O1 PG4 501 A 1 HETATM 2 C C1 PG4 . . . D 3 34.119 3.982 7.003 1 49.38 ? C1 PG4 501 A 1 HETATM 3 C C2 PG4 . . . D 3 33.305 4.026 5.705 1 48.22 ? C2 PG4 501 A 1 HETATM 4 O O2 PG4 . . . D 3 34.019 4.781 4.725 1 49.12 ? O2 PG4 501 A 1 HETATM 5 C C3 PG4 . . . D 3 33.214 4.79 3.543 1 47.48 ? C3 PG4 501 A 1 HETATM 6 C C4 PG4 . . . D 3 33.855 5.504 2.537 1 44.91 ? C4 PG4 501 A 1 HETATM 7 O O3 PG4 . . . D 3 35.067 4.84 2.203 1 44.35 ? O3 PG4 501 A 1 HETATM 8 C C5 PG4 . . . D 3 35.687 5.595 1.17 1 45.34 ? C5 PG4 501 A 1 HETATM 9 C C6 PG4 . . . D 3 37.01 4.927 0.787 1 43.78 ? C6 PG4 501 A 1 HETATM 10 O O4 PG4 . . . D 3 38.077 5.706 1.331 1 43.06 ? O4 PG4 501 A 1 HETATM 11 C C7 PG4 . . . D 3 39.299 5.073 0.969 1 45.47 ? C7 PG4 501 A 1 HETATM 12 C C8 PG4 . . . D 3 40.481 5.878 1.527 1 46.82 ? C8 PG4 501 A 1 HETATM 13 O O5 PG4 . . . D 3 40.203 6.306 2.864 1 47.26 ? O5 PG4 501 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #