data_2EXM # _model_server_result.job_id 4qJV6q41MZjkAYK7Iub8cg _model_server_result.datetime_utc '2025-04-17 03:22:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2exm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":400}' # _entry.id 2EXM # _exptl.entry_id 2EXM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 203.244 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-METHYLBUT-2-EN-1-YL)-9H-PURIN-6-AMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2EXM _cell.length_a 73.25 _cell.length_b 72.51 _cell.length_c 54.03 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EXM _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H13 N5' _chem_comp.formula_weight 203.244 _chem_comp.id ZIP _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-METHYLBUT-2-EN-1-YL)-9H-PURIN-6-AMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ISOPENTENYLADENINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C13 ZIP sing 376 n n C14 H141 ZIP sing 377 n n C14 H142 ZIP sing 378 n n C14 H143 ZIP sing 379 n n C13 C15 ZIP sing 380 n n C13 C12 ZIP doub 381 n n C15 H151 ZIP sing 382 n n C15 H152 ZIP sing 383 n n C15 H153 ZIP sing 384 n n C12 C11 ZIP sing 385 n n C12 H12 ZIP sing 386 n n C11 N10 ZIP sing 387 n n C11 H111 ZIP sing 388 n n C11 H112 ZIP sing 389 n n N10 C6 ZIP sing 390 n n N10 H10 ZIP sing 391 n n C6 C5 ZIP doub 392 n y C6 N1 ZIP sing 393 n y C5 N9 ZIP sing 394 n y C5 C4 ZIP sing 395 n y N9 C8 ZIP doub 396 n y C4 N7 ZIP sing 397 n y C4 N3 ZIP doub 398 n y N7 C8 ZIP sing 399 n y N7 H7 ZIP sing 400 n n C8 H8 ZIP sing 401 n n N3 C2 ZIP sing 402 n y C2 N1 ZIP doub 403 n y C2 H2 ZIP sing 404 n n # _atom_sites.entry_id 2EXM _atom_sites.fract_transf_matrix[1][1] 0.013652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013791 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018508 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZIP A 1 400 400 ZIP ISO . C 3 HOH A 1 502 502 HOH WAT . C 3 HOH A 2 509 509 HOH WAT . C 3 HOH A 3 516 516 HOH WAT . C 3 HOH A 4 530 530 HOH WAT . C 3 HOH A 5 601 601 HOH WAT . C 3 HOH A 6 602 602 HOH WAT . C 3 HOH A 7 603 603 HOH WAT . C 3 HOH A 8 604 604 HOH WAT . C 3 HOH A 9 608 608 HOH WAT . C 3 HOH A 10 610 610 HOH WAT . C 3 HOH A 11 612 612 HOH WAT . C 3 HOH A 12 614 614 HOH WAT . C 3 HOH A 13 615 615 HOH WAT . C 3 HOH A 14 616 616 HOH WAT . C 3 HOH A 15 617 617 HOH WAT . C 3 HOH A 16 623 623 HOH WAT . C 3 HOH A 17 628 628 HOH WAT . C 3 HOH A 18 638 638 HOH WAT . C 3 HOH A 19 641 641 HOH WAT . C 3 HOH A 20 643 643 HOH WAT . C 3 HOH A 21 647 647 HOH WAT . C 3 HOH A 22 650 650 HOH WAT . C 3 HOH A 23 657 657 HOH WAT . C 3 HOH A 24 665 665 HOH WAT . C 3 HOH A 25 701 701 HOH WAT . C 3 HOH A 26 702 702 HOH WAT . C 3 HOH A 27 704 704 HOH WAT . C 3 HOH A 28 707 707 HOH WAT . C 3 HOH A 29 708 708 HOH WAT . C 3 HOH A 30 709 709 HOH WAT . C 3 HOH A 31 710 710 HOH WAT . C 3 HOH A 32 711 711 HOH WAT . C 3 HOH A 33 713 713 HOH WAT . C 3 HOH A 34 714 714 HOH WAT . C 3 HOH A 35 715 715 HOH WAT . C 3 HOH A 36 718 718 HOH WAT . C 3 HOH A 37 719 719 HOH WAT . C 3 HOH A 38 720 720 HOH WAT . C 3 HOH A 39 721 721 HOH WAT . C 3 HOH A 40 722 722 HOH WAT . C 3 HOH A 41 723 723 HOH WAT . C 3 HOH A 42 724 724 HOH WAT . C 3 HOH A 43 725 725 HOH WAT . C 3 HOH A 44 726 726 HOH WAT . C 3 HOH A 45 727 727 HOH WAT . C 3 HOH A 46 730 730 HOH WAT . C 3 HOH A 47 732 732 HOH WAT . C 3 HOH A 48 801 801 HOH WAT . C 3 HOH A 49 803 803 HOH WAT . C 3 HOH A 50 805 805 HOH WAT . C 3 HOH A 51 808 808 HOH WAT . C 3 HOH A 52 809 809 HOH WAT . C 3 HOH A 53 810 810 HOH WAT . C 3 HOH A 54 811 811 HOH WAT . C 3 HOH A 55 812 812 HOH WAT . C 3 HOH A 56 813 813 HOH WAT . C 3 HOH A 57 814 814 HOH WAT . C 3 HOH A 58 815 815 HOH WAT . C 3 HOH A 59 816 816 HOH WAT . C 3 HOH A 60 817 817 HOH WAT . C 3 HOH A 61 818 818 HOH WAT . C 3 HOH A 62 819 819 HOH WAT . C 3 HOH A 63 820 820 HOH WAT . C 3 HOH A 64 821 821 HOH WAT . C 3 HOH A 65 822 822 HOH WAT . C 3 HOH A 66 823 823 HOH WAT . C 3 HOH A 67 824 824 HOH WAT . C 3 HOH A 68 825 825 HOH WAT . C 3 HOH A 69 826 826 HOH WAT . C 3 HOH A 70 827 827 HOH WAT . C 3 HOH A 71 834 834 HOH WAT . C 3 HOH A 72 836 836 HOH WAT . C 3 HOH A 73 837 837 HOH WAT . C 3 HOH A 74 839 839 HOH WAT . C 3 HOH A 75 844 844 HOH WAT . C 3 HOH A 76 848 848 HOH WAT . C 3 HOH A 77 850 850 HOH WAT . C 3 HOH A 78 853 853 HOH WAT . C 3 HOH A 79 854 854 HOH WAT . C 3 HOH A 80 855 855 HOH WAT . C 3 HOH A 81 856 856 HOH WAT . C 3 HOH A 82 901 901 HOH WAT . C 3 HOH A 83 903 903 HOH WAT . C 3 HOH A 84 905 905 HOH WAT . C 3 HOH A 85 906 906 HOH WAT . C 3 HOH A 86 911 911 HOH WAT . C 3 HOH A 87 919 919 HOH WAT . C 3 HOH A 88 920 920 HOH WAT . C 3 HOH A 89 922 922 HOH WAT . C 3 HOH A 90 924 924 HOH WAT . C 3 HOH A 91 929 929 HOH WAT . C 3 HOH A 92 935 935 HOH WAT . C 3 HOH A 93 937 937 HOH WAT . C 3 HOH A 94 940 940 HOH WAT . C 3 HOH A 95 941 941 HOH WAT . C 3 HOH A 96 943 943 HOH WAT . C 3 HOH A 97 944 944 HOH WAT . C 3 HOH A 98 957 957 HOH WAT . C 3 HOH A 99 965 965 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 ZIP . . . B 2 98.546 97.033 80.888 1 51.96 ? C14 ZIP 400 A 1 HETATM 2 C C13 ZIP . . . B 2 99.135 98.442 81.011 1 49.63 ? C13 ZIP 400 A 1 HETATM 3 C C15 ZIP . . . B 2 98.44 99.28 82.065 1 48.3 ? C15 ZIP 400 A 1 HETATM 4 C C12 ZIP . . . B 2 99.784 99.01 79.96 1 48.51 ? C12 ZIP 400 A 1 HETATM 5 C C11 ZIP . . . B 2 101.236 98.924 79.51 1 44.32 ? C11 ZIP 400 A 1 HETATM 6 N N10 ZIP . . . B 2 102.364 99.262 80.404 1 38.65 ? N10 ZIP 400 A 1 HETATM 7 C C6 ZIP . . . B 2 103.411 100.192 80.082 1 35.65 ? C6 ZIP 400 A 1 HETATM 8 C C5 ZIP . . . B 2 104.72 100.237 80.681 1 32.52 ? C5 ZIP 400 A 1 HETATM 9 N N9 ZIP . . . B 2 105.329 99.463 81.692 1 29.66 ? N9 ZIP 400 A 1 HETATM 10 C C4 ZIP . . . B 2 105.62 101.216 80.309 1 30.09 ? C4 ZIP 400 A 1 HETATM 11 N N7 ZIP . . . B 2 106.773 101.065 80.99 1 28.49 ? N7 ZIP 400 A 1 HETATM 12 C C8 ZIP . . . B 2 106.509 100.038 81.839 1 32.47 ? C8 ZIP 400 A 1 HETATM 13 N N3 ZIP . . . B 2 105.229 102.155 79.294 1 27.54 ? N3 ZIP 400 A 1 HETATM 14 C C2 ZIP . . . B 2 104.039 102.005 78.748 1 31.36 ? C2 ZIP 400 A 1 HETATM 15 N N1 ZIP . . . B 2 103.192 101.103 79.123 1 33.61 ? N1 ZIP 400 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 15 #