data_2EXV # _model_server_result.job_id eQ4B-cwMSj4tQhbL6m6cMw _model_server_result.datetime_utc '2025-03-04 22:32:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2exv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 2EXV # _exptl.entry_id 2EXV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.052 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 2EXV _cell.length_a 66.766 _cell.length_b 66.766 _cell.length_c 62.462 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2EXV _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 12 A CYS 12 1_555 C CAB HEC . A HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? covale ? covale2 A SG CYS 15 A CYS 15 1_555 C CAC HEC . A HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? covale ? covale3 B SG CYS 12 C CYS 12 1_555 E CAB HEC . C HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? covale ? covale4 B SG CYS 15 C CYS 15 1_555 E CAC HEC . C HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc1 A NE2 HIS 16 A HIS 16 1_555 C FE HEC . A HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.986 ? metalc ? metalc2 A SD MET 61 A MET 61 1_555 C FE HEC . A HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? metalc ? metalc3 B NE2 HIS 16 C HIS 16 1_555 E FE HEC . C HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.969 ? metalc ? metalc4 B SD MET 61 C MET 61 1_555 E FE HEC . C HEC 83 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? # _chem_comp.formula 'C2 H4 O2' _chem_comp.formula_weight 60.052 _chem_comp.id ACY _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACY doub 1 n n C OXT ACY sing 2 n n C CH3 ACY sing 3 n n OXT HXT ACY sing 4 n n CH3 H1 ACY sing 5 n n CH3 H2 ACY sing 6 n n CH3 H3 ACY sing 7 n n # _atom_sites.entry_id 2EXV _atom_sites.fract_transf_matrix[1][1] 0.014978 _atom_sites.fract_transf_matrix[1][2] 0.008647 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017295 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01601 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEC A 1 83 83 HEC HEC . D 3 ACY A 1 201 201 ACY ACY . E 2 HEC C 1 83 83 HEC HEC . F 3 ACY C 1 202 202 ACY ACY . G 4 HOH A 1 202 1 HOH HOH . G 4 HOH A 2 203 2 HOH HOH . G 4 HOH A 3 204 3 HOH HOH . G 4 HOH A 4 205 4 HOH HOH . G 4 HOH A 5 206 5 HOH HOH . G 4 HOH A 6 207 7 HOH HOH . G 4 HOH A 7 208 8 HOH HOH . G 4 HOH A 8 209 9 HOH HOH . G 4 HOH A 9 210 11 HOH HOH . G 4 HOH A 10 211 12 HOH HOH . G 4 HOH A 11 212 13 HOH HOH . G 4 HOH A 12 213 14 HOH HOH . G 4 HOH A 13 214 15 HOH HOH . G 4 HOH A 14 215 20 HOH HOH . G 4 HOH A 15 216 21 HOH HOH . G 4 HOH A 16 217 23 HOH HOH . G 4 HOH A 17 218 24 HOH HOH . G 4 HOH A 18 219 26 HOH HOH . G 4 HOH A 19 220 27 HOH HOH . G 4 HOH A 20 221 28 HOH HOH . G 4 HOH A 21 222 29 HOH HOH . G 4 HOH A 22 223 31 HOH HOH . G 4 HOH A 23 224 35 HOH HOH . G 4 HOH A 24 225 37 HOH HOH . G 4 HOH A 25 226 40 HOH HOH . G 4 HOH A 26 227 43 HOH HOH . G 4 HOH A 27 228 44 HOH HOH . G 4 HOH A 28 229 45 HOH HOH . G 4 HOH A 29 230 49 HOH HOH . G 4 HOH A 30 231 51 HOH HOH . G 4 HOH A 31 232 53 HOH HOH . G 4 HOH A 32 233 54 HOH HOH . G 4 HOH A 33 234 55 HOH HOH . G 4 HOH A 34 235 56 HOH HOH . G 4 HOH A 35 236 59 HOH HOH . G 4 HOH A 36 237 62 HOH HOH . G 4 HOH A 37 238 63 HOH HOH . G 4 HOH A 38 239 64 HOH HOH . G 4 HOH A 39 240 65 HOH HOH . G 4 HOH A 40 241 66 HOH HOH . G 4 HOH A 41 242 70 HOH HOH . G 4 HOH A 42 243 71 HOH HOH . G 4 HOH A 43 244 72 HOH HOH . G 4 HOH A 44 245 73 HOH HOH . G 4 HOH A 45 246 74 HOH HOH . G 4 HOH A 46 247 75 HOH HOH . G 4 HOH A 47 248 76 HOH HOH . G 4 HOH A 48 249 82 HOH HOH . G 4 HOH A 49 250 83 HOH HOH . G 4 HOH A 50 251 84 HOH HOH . G 4 HOH A 51 252 86 HOH HOH . G 4 HOH A 52 253 88 HOH HOH . G 4 HOH A 53 254 89 HOH HOH . G 4 HOH A 54 255 97 HOH HOH . G 4 HOH A 55 256 102 HOH HOH . G 4 HOH A 56 257 106 HOH HOH . G 4 HOH A 57 258 107 HOH HOH . G 4 HOH A 58 259 108 HOH HOH . G 4 HOH A 59 260 110 HOH HOH . G 4 HOH A 60 261 111 HOH HOH . G 4 HOH A 61 262 112 HOH HOH . G 4 HOH A 62 263 114 HOH HOH . G 4 HOH A 63 264 118 HOH HOH . G 4 HOH A 64 265 120 HOH HOH . G 4 HOH A 65 266 122 HOH HOH . G 4 HOH A 66 267 123 HOH HOH . G 4 HOH A 67 268 132 HOH HOH . G 4 HOH A 68 269 134 HOH HOH . H 4 HOH C 1 203 6 HOH HOH . H 4 HOH C 2 204 10 HOH HOH . H 4 HOH C 3 205 16 HOH HOH . H 4 HOH C 4 206 17 HOH HOH . H 4 HOH C 5 207 18 HOH HOH . H 4 HOH C 6 208 19 HOH HOH . H 4 HOH C 7 209 22 HOH HOH . H 4 HOH C 8 210 25 HOH HOH . H 4 HOH C 9 211 30 HOH HOH . H 4 HOH C 10 212 32 HOH HOH . H 4 HOH C 11 213 33 HOH HOH . H 4 HOH C 12 214 34 HOH HOH . H 4 HOH C 13 215 36 HOH HOH . H 4 HOH C 14 216 38 HOH HOH . H 4 HOH C 15 217 39 HOH HOH . H 4 HOH C 16 218 41 HOH HOH . H 4 HOH C 17 219 47 HOH HOH . H 4 HOH C 18 220 48 HOH HOH . H 4 HOH C 19 221 50 HOH HOH . H 4 HOH C 20 222 52 HOH HOH . H 4 HOH C 21 223 57 HOH HOH . H 4 HOH C 22 224 58 HOH HOH . H 4 HOH C 23 225 60 HOH HOH . H 4 HOH C 24 226 61 HOH HOH . H 4 HOH C 25 227 68 HOH HOH . H 4 HOH C 26 228 69 HOH HOH . H 4 HOH C 27 229 77 HOH HOH . H 4 HOH C 28 230 78 HOH HOH . H 4 HOH C 29 231 79 HOH HOH . H 4 HOH C 30 232 80 HOH HOH . H 4 HOH C 31 233 81 HOH HOH . H 4 HOH C 32 234 85 HOH HOH . H 4 HOH C 33 235 87 HOH HOH . H 4 HOH C 34 236 90 HOH HOH . H 4 HOH C 35 237 91 HOH HOH . H 4 HOH C 36 238 92 HOH HOH . H 4 HOH C 37 239 93 HOH HOH . H 4 HOH C 38 240 94 HOH HOH . H 4 HOH C 39 241 95 HOH HOH . H 4 HOH C 40 242 96 HOH HOH . H 4 HOH C 41 243 98 HOH HOH . H 4 HOH C 42 244 99 HOH HOH . H 4 HOH C 43 245 100 HOH HOH . H 4 HOH C 44 246 103 HOH HOH . H 4 HOH C 45 247 104 HOH HOH . H 4 HOH C 46 248 105 HOH HOH . H 4 HOH C 47 249 109 HOH HOH . H 4 HOH C 48 250 113 HOH HOH . H 4 HOH C 49 251 115 HOH HOH . H 4 HOH C 50 252 116 HOH HOH . H 4 HOH C 51 253 117 HOH HOH . H 4 HOH C 52 254 119 HOH HOH . H 4 HOH C 53 255 126 HOH HOH . H 4 HOH C 54 256 128 HOH HOH . H 4 HOH C 55 257 130 HOH HOH . H 4 HOH C 56 258 133 HOH HOH . H 4 HOH C 57 259 135 HOH HOH . H 4 HOH C 58 260 136 HOH HOH . H 4 HOH C 59 261 137 HOH HOH . H 4 HOH C 60 262 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACY . . . D 3 -18.571 18.416 17.187 1 63.59 ? C ACY 201 A 1 HETATM 2 O O ACY . . . D 3 -17.512 17.873 16.811 1 63.74 ? O ACY 201 A 1 HETATM 3 O OXT ACY . . . D 3 -19.703 17.999 16.846 1 63.71 ? OXT ACY 201 A 1 HETATM 4 C CH3 ACY . . . D 3 -18.475 19.612 18.094 1 63.33 ? CH3 ACY 201 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #