data_2F08 # _model_server_result.job_id iDF6z63JkXOK81_GYqZieg _model_server_result.datetime_utc '2024-10-18 04:31:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f08 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":400}' # _entry.id 2F08 # _exptl.entry_id 2F08 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 324.367 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.35 _cell.angle_gamma 90 _cell.entry_id 2F08 _cell.length_a 106.124 _cell.length_b 54.328 _cell.length_c 102.354 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F08 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F 1 1 B,G 2 1 C,E,H 3 1 D,I 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 A CYS 8 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 21 A CYS 21 1_555 A SG CYS 27 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf3 A SG CYS 73 A CYS 73 1_555 A SG CYS 78 A CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf4 B SG CYS 8 B CYS 8 1_555 B SG CYS 119 B CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf5 B SG CYS 21 B CYS 21 1_555 B SG CYS 27 B CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf6 B SG CYS 73 B CYS 73 1_555 B SG CYS 78 B CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf7 C SG CYS 8 C CYS 8 1_555 C SG CYS 119 C CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 C SG CYS 21 C CYS 21 1_555 C SG CYS 27 C CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf9 C SG CYS 73 C CYS 73 1_555 C SG CYS 78 C CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf10 D SG CYS 8 D CYS 8 1_555 D SG CYS 119 D CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf11 D SG CYS 21 D CYS 21 1_555 D SG CYS 27 D CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf12 D SG CYS 73 D CYS 73 1_555 D SG CYS 78 D CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? # _chem_comp.formula 'C14 H28 O8' _chem_comp.formula_weight 324.367 _chem_comp.id P4C _chem_comp.mon_nstd_flag . _chem_comp.name 'O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE 400' # _atom_sites.entry_id 2F08 _atom_sites.fract_transf_matrix[1][1] 0.009423 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000223 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018407 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009773 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 P4C C 1 400 400 P4C P4C . F 3 HOH A 1 200 200 HOH TIP . F 3 HOH A 2 213 213 HOH TIP . F 3 HOH A 3 214 214 HOH TIP . F 3 HOH A 4 215 215 HOH TIP . F 3 HOH A 5 216 216 HOH TIP . F 3 HOH A 6 228 228 HOH TIP . F 3 HOH A 7 229 229 HOH TIP . F 3 HOH A 8 230 230 HOH TIP . F 3 HOH A 9 231 231 HOH TIP . F 3 HOH A 10 232 232 HOH TIP . F 3 HOH A 11 233 233 HOH TIP . F 3 HOH A 12 234 234 HOH TIP . F 3 HOH A 13 236 236 HOH TIP . F 3 HOH A 14 237 237 HOH TIP . F 3 HOH A 15 238 238 HOH TIP . F 3 HOH A 16 239 239 HOH TIP . F 3 HOH A 17 240 240 HOH TIP . F 3 HOH A 18 241 241 HOH TIP . F 3 HOH A 19 242 242 HOH TIP . F 3 HOH A 20 261 261 HOH TIP . F 3 HOH A 21 262 262 HOH TIP . F 3 HOH A 22 263 263 HOH TIP . F 3 HOH A 23 264 264 HOH TIP . F 3 HOH A 24 267 267 HOH TIP . F 3 HOH A 25 268 268 HOH TIP . F 3 HOH A 26 280 280 HOH TIP . F 3 HOH A 27 283 283 HOH TIP . F 3 HOH A 28 284 284 HOH TIP . F 3 HOH A 29 288 288 HOH TIP . F 3 HOH A 30 295 295 HOH TIP . F 3 HOH A 31 296 296 HOH TIP . F 3 HOH A 32 298 298 HOH TIP . F 3 HOH A 33 299 299 HOH TIP . F 3 HOH A 34 305 305 HOH TIP . F 3 HOH A 35 306 306 HOH TIP . F 3 HOH A 36 307 307 HOH TIP . F 3 HOH A 37 309 309 HOH TIP . F 3 HOH A 38 310 310 HOH TIP . F 3 HOH A 39 311 311 HOH TIP . F 3 HOH A 40 313 313 HOH TIP . F 3 HOH A 41 314 314 HOH TIP . F 3 HOH A 42 315 315 HOH TIP . F 3 HOH A 43 321 321 HOH TIP . F 3 HOH A 44 327 327 HOH TIP . F 3 HOH A 45 337 337 HOH TIP . F 3 HOH A 46 341 341 HOH TIP . F 3 HOH A 47 342 342 HOH TIP . F 3 HOH A 48 343 343 HOH TIP . G 3 HOH B 1 201 201 HOH TIP . G 3 HOH B 2 202 202 HOH TIP . G 3 HOH B 3 203 203 HOH TIP . G 3 HOH B 4 204 204 HOH TIP . G 3 HOH B 5 205 205 HOH TIP . G 3 HOH B 6 206 206 HOH TIP . G 3 HOH B 7 207 207 HOH TIP . G 3 HOH B 8 208 208 HOH TIP . G 3 HOH B 9 209 209 HOH TIP . G 3 HOH B 10 210 210 HOH TIP . G 3 HOH B 11 212 212 HOH TIP . G 3 HOH B 12 217 217 HOH TIP . G 3 HOH B 13 235 235 HOH TIP . G 3 HOH B 14 243 243 HOH TIP . G 3 HOH B 15 244 244 HOH TIP . G 3 HOH B 16 245 245 HOH TIP . G 3 HOH B 17 246 246 HOH TIP . G 3 HOH B 18 250 250 HOH TIP . G 3 HOH B 19 251 251 HOH TIP . G 3 HOH B 20 265 265 HOH TIP . G 3 HOH B 21 266 266 HOH TIP . G 3 HOH B 22 269 269 HOH TIP . G 3 HOH B 23 270 270 HOH TIP . G 3 HOH B 24 271 271 HOH TIP . G 3 HOH B 25 272 272 HOH TIP . G 3 HOH B 26 273 273 HOH TIP . G 3 HOH B 27 274 274 HOH TIP . G 3 HOH B 28 275 275 HOH TIP . G 3 HOH B 29 276 276 HOH TIP . G 3 HOH B 30 281 281 HOH TIP . G 3 HOH B 31 285 285 HOH TIP . G 3 HOH B 32 286 286 HOH TIP . G 3 HOH B 33 287 287 HOH TIP . G 3 HOH B 34 297 297 HOH TIP . G 3 HOH B 35 300 300 HOH TIP . G 3 HOH B 36 301 301 HOH TIP . G 3 HOH B 37 302 302 HOH TIP . G 3 HOH B 38 303 303 HOH TIP . G 3 HOH B 39 304 304 HOH TIP . G 3 HOH B 40 312 312 HOH TIP . G 3 HOH B 41 316 316 HOH TIP . G 3 HOH B 42 317 317 HOH TIP . G 3 HOH B 43 319 319 HOH TIP . G 3 HOH B 44 320 320 HOH TIP . G 3 HOH B 45 329 329 HOH TIP . G 3 HOH B 46 330 330 HOH TIP . G 3 HOH B 47 344 344 HOH TIP . G 3 HOH B 48 345 345 HOH TIP . G 3 HOH B 49 346 346 HOH TIP . H 3 HOH C 1 211 211 HOH TIP . H 3 HOH C 2 218 218 HOH TIP . H 3 HOH C 3 219 219 HOH TIP . H 3 HOH C 4 220 220 HOH TIP . H 3 HOH C 5 221 221 HOH TIP . H 3 HOH C 6 227 227 HOH TIP . H 3 HOH C 7 247 247 HOH TIP . H 3 HOH C 8 248 248 HOH TIP . H 3 HOH C 9 249 249 HOH TIP . H 3 HOH C 10 252 252 HOH TIP . H 3 HOH C 11 253 253 HOH TIP . H 3 HOH C 12 254 254 HOH TIP . H 3 HOH C 13 255 255 HOH TIP . H 3 HOH C 14 289 289 HOH TIP . H 3 HOH C 15 290 290 HOH TIP . H 3 HOH C 16 291 291 HOH TIP . H 3 HOH C 17 318 318 HOH TIP . H 3 HOH C 18 322 322 HOH TIP . H 3 HOH C 19 323 323 HOH TIP . H 3 HOH C 20 324 324 HOH TIP . H 3 HOH C 21 325 325 HOH TIP . H 3 HOH C 22 331 331 HOH TIP . H 3 HOH C 23 332 332 HOH TIP . H 3 HOH C 24 333 333 HOH TIP . H 3 HOH C 25 338 338 HOH TIP . H 3 HOH C 26 347 347 HOH TIP . H 3 HOH C 27 349 349 HOH TIP . H 3 HOH C 28 350 350 HOH TIP . I 3 HOH D 1 222 222 HOH TIP . I 3 HOH D 2 223 223 HOH TIP . I 3 HOH D 3 224 224 HOH TIP . I 3 HOH D 4 225 225 HOH TIP . I 3 HOH D 5 226 226 HOH TIP . I 3 HOH D 6 256 256 HOH TIP . I 3 HOH D 7 257 257 HOH TIP . I 3 HOH D 8 258 258 HOH TIP . I 3 HOH D 9 259 259 HOH TIP . I 3 HOH D 10 260 260 HOH TIP . I 3 HOH D 11 277 277 HOH TIP . I 3 HOH D 12 278 278 HOH TIP . I 3 HOH D 13 279 279 HOH TIP . I 3 HOH D 14 282 282 HOH TIP . I 3 HOH D 15 292 292 HOH TIP . I 3 HOH D 16 293 293 HOH TIP . I 3 HOH D 17 294 294 HOH TIP . I 3 HOH D 18 308 308 HOH TIP . I 3 HOH D 19 326 326 HOH TIP . I 3 HOH D 20 328 328 HOH TIP . I 3 HOH D 21 334 334 HOH TIP . I 3 HOH D 22 335 335 HOH TIP . I 3 HOH D 23 336 336 HOH TIP . I 3 HOH D 24 339 339 HOH TIP . I 3 HOH D 25 340 340 HOH TIP . I 3 HOH D 26 348 348 HOH TIP . I 3 HOH D 27 351 351 HOH TIP . I 3 HOH D 28 352 352 HOH TIP . I 3 HOH D 29 353 353 HOH TIP . I 3 HOH D 30 354 354 HOH TIP . I 3 HOH D 31 355 355 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 P4C . . . E 2 40.477 34.562 84.877 0.5 32.19 ? O1 P4C 400 C 1 HETATM 2 C C2 P4C . . . E 2 41.403 35.65 84.79 0.5 32.12 ? C2 P4C 400 C 1 HETATM 3 C C3 P4C . . . E 2 42.844 35.666 84.693 0.5 32.15 ? C3 P4C 400 C 1 HETATM 4 O O4 P4C . . . E 2 43.482 37.06 85.002 0.5 32.19 ? O4 P4C 400 C 1 HETATM 5 C C5 P4C . . . E 2 44.899 37.001 85.253 0.5 32.14 ? C5 P4C 400 C 1 HETATM 6 C C6 P4C . . . E 2 45.089 37.464 86.59 0.5 32.18 ? C6 P4C 400 C 1 HETATM 7 O O7 P4C . . . E 2 44.28 36.774 87.683 0.5 32.2 ? O7 P4C 400 C 1 HETATM 8 C C8 P4C . . . E 2 44.347 37.465 88.94 0.5 32.21 ? C8 P4C 400 C 1 HETATM 9 C C9 P4C . . . E 2 43.543 36.757 89.953 0.5 32.21 ? C9 P4C 400 C 1 HETATM 10 O O10 P4C . . . E 2 42.199 36.056 89.415 0.5 32.22 ? O10 P4C 400 C 1 HETATM 11 C C11 P4C . . . E 2 41.103 36.922 89.03 0.5 32.26 ? C11 P4C 400 C 1 HETATM 12 C C12 P4C . . . E 2 39.98 36.14 88.57 0.5 32.19 ? C12 P4C 400 C 1 HETATM 13 O O13 P4C . . . E 2 38.753 36.932 87.997 0.5 32.24 ? O13 P4C 400 C 1 HETATM 14 C C14 P4C . . . E 2 37.479 36.256 88.076 0.5 32.19 ? C14 P4C 400 C 1 HETATM 15 C C15 P4C . . . E 2 36.796 36.319 86.821 0.5 32.18 ? C15 P4C 400 C 1 HETATM 16 O O16 P4C . . . E 2 37.577 37.091 85.699 0.5 32.21 ? O16 P4C 400 C 1 HETATM 17 C C17 P4C . . . E 2 37.758 36.41 84.438 0.5 32.22 ? C17 P4C 400 C 1 HETATM 18 C C18 P4C . . . E 2 36.498 36.318 83.736 0.5 32.18 ? C18 P4C 400 C 1 HETATM 19 O O19 P4C . . . E 2 36.235 34.886 83.106 0.5 32.28 ? O19 P4C 400 C 1 HETATM 20 C C20 P4C . . . E 2 35.944 33.802 84.056 0.5 32.18 ? C20 P4C 400 C 1 HETATM 21 C C21 P4C . . . E 2 37.01 32.807 84.289 0.5 32.18 ? C21 P4C 400 C 1 HETATM 22 O O22 P4C . . . E 2 37.874 33.059 84.342 0.5 32.12 ? O22 P4C 400 C 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #