data_2F0Z # _model_server_result.job_id q12WroX2-eG3gmT-KVQwlQ _model_server_result.datetime_utc '2024-12-21 12:06:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f0z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":381}' # _entry.id 2F0Z # _exptl.entry_id 2F0Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 332.31 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ZANAMIVIR _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 2F0Z _cell.length_a 85.51 _cell.length_b 85.68 _cell.length_c 92.09 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F0Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H20 N4 O7' _chem_comp.formula_weight 332.31 _chem_comp.id ZMR _chem_comp.mon_nstd_flag . _chem_comp.name ZANAMIVIR _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms '4-GUANIDINO-2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID;4-guanidino-Neu5Ac2en;MODIFIED SIALIC ACID' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1A ZMR doub 376 n n C1 O1B ZMR sing 377 n n C1 C2 ZMR sing 378 n n C2 C3 ZMR doub 379 n n C2 O6 ZMR sing 380 n n C3 C4 ZMR sing 381 n n C3 H3 ZMR sing 382 n n C4 C5 ZMR sing 383 n n C4 NE ZMR sing 384 n n C4 H4 ZMR sing 385 n n C5 N5 ZMR sing 386 n n C5 C6 ZMR sing 387 n n C5 H5 ZMR sing 388 n n N5 C10 ZMR sing 389 n n N5 HN5 ZMR sing 390 n n C10 O10 ZMR doub 391 n n C10 C11 ZMR sing 392 n n C11 H111 ZMR sing 393 n n C11 H112 ZMR sing 394 n n C11 H113 ZMR sing 395 n n C6 O6 ZMR sing 396 n n C6 C7 ZMR sing 397 n n C6 H6 ZMR sing 398 n n C7 O7 ZMR sing 399 n n C7 C8 ZMR sing 400 n n C7 H7 ZMR sing 401 n n O7 HO7 ZMR sing 402 n n C8 O8 ZMR sing 403 n n C8 C9 ZMR sing 404 n n C8 H8 ZMR sing 405 n n O8 HO8 ZMR sing 406 n n C9 O9 ZMR sing 407 n n C9 H91 ZMR sing 408 n n C9 H92 ZMR sing 409 n n O9 HO9 ZMR sing 410 n n NE CZ ZMR sing 411 n n CZ NH1 ZMR doub 412 n n CZ NH2 ZMR sing 413 n n NH1 HNH1 ZMR sing 414 n n NH2 HN21 ZMR sing 415 n n NH2 HN22 ZMR sing 416 n n O1B HO1B ZMR sing 417 n n NE HNE ZMR sing 418 n n # _atom_sites.entry_id 2F0Z _atom_sites.fract_transf_matrix[1][1] 0.011695 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011671 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010859 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZMR A 1 381 1 ZMR ZMR . C 3 HOH A 1 382 1 HOH HOH . C 3 HOH A 2 383 2 HOH HOH . C 3 HOH A 3 384 3 HOH HOH . C 3 HOH A 4 385 4 HOH HOH . C 3 HOH A 5 386 5 HOH HOH . C 3 HOH A 6 387 6 HOH HOH . C 3 HOH A 7 388 7 HOH HOH . C 3 HOH A 8 389 8 HOH HOH . C 3 HOH A 9 390 9 HOH HOH . C 3 HOH A 10 391 10 HOH HOH . C 3 HOH A 11 392 11 HOH HOH . C 3 HOH A 12 393 12 HOH HOH . C 3 HOH A 13 394 13 HOH HOH . C 3 HOH A 14 395 14 HOH HOH . C 3 HOH A 15 396 15 HOH HOH . C 3 HOH A 16 397 16 HOH HOH . C 3 HOH A 17 398 17 HOH HOH . C 3 HOH A 18 399 18 HOH HOH . C 3 HOH A 19 400 19 HOH HOH . C 3 HOH A 20 401 20 HOH HOH . C 3 HOH A 21 402 21 HOH HOH . C 3 HOH A 22 403 22 HOH HOH . C 3 HOH A 23 404 23 HOH HOH . C 3 HOH A 24 405 24 HOH HOH . C 3 HOH A 25 406 25 HOH HOH . C 3 HOH A 26 407 26 HOH HOH . C 3 HOH A 27 408 27 HOH HOH . C 3 HOH A 28 409 28 HOH HOH . C 3 HOH A 29 410 29 HOH HOH . C 3 HOH A 30 411 30 HOH HOH . C 3 HOH A 31 412 31 HOH HOH . C 3 HOH A 32 413 32 HOH HOH . C 3 HOH A 33 414 33 HOH HOH . C 3 HOH A 34 415 34 HOH HOH . C 3 HOH A 35 416 35 HOH HOH . C 3 HOH A 36 417 36 HOH HOH . C 3 HOH A 37 418 37 HOH HOH . C 3 HOH A 38 419 38 HOH HOH . C 3 HOH A 39 420 39 HOH HOH . C 3 HOH A 40 421 40 HOH HOH . C 3 HOH A 41 422 41 HOH HOH . C 3 HOH A 42 423 42 HOH HOH . C 3 HOH A 43 424 43 HOH HOH . C 3 HOH A 44 425 44 HOH HOH . C 3 HOH A 45 426 45 HOH HOH . C 3 HOH A 46 427 46 HOH HOH . C 3 HOH A 47 428 47 HOH HOH . C 3 HOH A 48 429 48 HOH HOH . C 3 HOH A 49 430 49 HOH HOH . C 3 HOH A 50 431 50 HOH HOH . C 3 HOH A 51 432 51 HOH HOH . C 3 HOH A 52 433 52 HOH HOH . C 3 HOH A 53 434 53 HOH HOH . C 3 HOH A 54 435 54 HOH HOH . C 3 HOH A 55 436 55 HOH HOH . C 3 HOH A 56 437 56 HOH HOH . C 3 HOH A 57 438 57 HOH HOH . C 3 HOH A 58 439 58 HOH HOH . C 3 HOH A 59 440 59 HOH HOH . C 3 HOH A 60 441 60 HOH HOH . C 3 HOH A 61 442 61 HOH HOH . C 3 HOH A 62 443 62 HOH HOH . C 3 HOH A 63 444 63 HOH HOH . C 3 HOH A 64 445 64 HOH HOH . C 3 HOH A 65 446 65 HOH HOH . C 3 HOH A 66 447 66 HOH HOH . C 3 HOH A 67 448 67 HOH HOH . C 3 HOH A 68 449 68 HOH HOH . C 3 HOH A 69 450 69 HOH HOH . C 3 HOH A 70 451 70 HOH HOH . C 3 HOH A 71 452 71 HOH HOH . C 3 HOH A 72 453 72 HOH HOH . C 3 HOH A 73 454 73 HOH HOH . C 3 HOH A 74 455 74 HOH HOH . C 3 HOH A 75 456 75 HOH HOH . C 3 HOH A 76 457 76 HOH HOH . C 3 HOH A 77 458 77 HOH HOH . C 3 HOH A 78 459 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ZMR . . . B 2 34.253 27.743 25.555 1 19.86 ? C1 ZMR 381 A 1 HETATM 2 O O1A ZMR . . . B 2 34.571 26.613 24.849 1 20.37 ? O1A ZMR 381 A 1 HETATM 3 O O1B ZMR . . . B 2 34.215 28.873 24.934 1 19.29 ? O1B ZMR 381 A 1 HETATM 4 C C2 ZMR . . . B 2 33.976 27.694 26.934 1 19.66 ? C2 ZMR 381 A 1 HETATM 5 C C3 ZMR . . . B 2 33.577 28.95 27.653 1 21.06 ? C3 ZMR 381 A 1 HETATM 6 C C4 ZMR . . . B 2 33.09 28.667 29.086 1 21.87 ? C4 ZMR 381 A 1 HETATM 7 C C5 ZMR . . . B 2 33.797 27.456 29.691 1 20.73 ? C5 ZMR 381 A 1 HETATM 8 N N5 ZMR . . . B 2 33.23 27.273 31.032 1 22.87 ? N5 ZMR 381 A 1 HETATM 9 C C10 ZMR . . . B 2 33.917 27.126 32.16 1 22.53 ? C10 ZMR 381 A 1 HETATM 10 O O10 ZMR . . . B 2 35.292 27.131 32.203 1 24.39 ? O10 ZMR 381 A 1 HETATM 11 C C11 ZMR . . . B 2 33.159 26.939 33.455 1 21.1 ? C11 ZMR 381 A 1 HETATM 12 C C6 ZMR . . . B 2 33.565 26.241 28.772 1 20.04 ? C6 ZMR 381 A 1 HETATM 13 O O6 ZMR . . . B 2 34.113 26.533 27.477 1 20.37 ? O6 ZMR 381 A 1 HETATM 14 C C7 ZMR . . . B 2 34.263 24.949 29.264 1 20.29 ? C7 ZMR 381 A 1 HETATM 15 O O7 ZMR . . . B 2 35.676 25.154 29.309 1 18.83 ? O7 ZMR 381 A 1 HETATM 16 C C8 ZMR . . . B 2 34.039 23.721 28.349 1 21.46 ? C8 ZMR 381 A 1 HETATM 17 O O8 ZMR . . . B 2 32.645 23.42 28.24 1 25.86 ? O8 ZMR 381 A 1 HETATM 18 C C9 ZMR . . . B 2 34.737 22.435 28.847 1 19.61 ? C9 ZMR 381 A 1 HETATM 19 O O9 ZMR . . . B 2 35.684 22.629 29.869 1 16.67 ? O9 ZMR 381 A 1 HETATM 20 N NE ZMR . . . B 2 33.345 29.867 29.865 1 25.26 ? NE ZMR 381 A 1 HETATM 21 C CZ ZMR . . . B 2 32.497 30.519 30.87 1 27.07 ? CZ ZMR 381 A 1 HETATM 22 N NH1 ZMR . . . B 2 31.301 30.026 31.199 1 26.38 ? NH1 ZMR 381 A 1 HETATM 23 N NH2 ZMR . . . B 2 32.939 31.625 31.462 1 26.55 ? NH2 ZMR 381 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 23 #