data_2F2K # _model_server_result.job_id -ykfKyJkmb1heOAqu95s9w _model_server_result.datetime_utc '2024-12-22 02:06:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":350}' # _entry.id 2F2K # _exptl.entry_id 2F2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 745.421 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.25 _cell.angle_gamma 90 _cell.entry_id 2F2K _cell.length_a 47.2 _cell.length_b 66.7 _cell.length_c 49.3 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H30 N7 O17 P3' _chem_comp.formula_weight 745.421 _chem_comp.id NDP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NDP doub 237 n n PA O2A NDP sing 238 n n PA O5B NDP sing 239 n n PA O3 NDP sing 240 n n O2A HOA2 NDP sing 241 n n O5B C5B NDP sing 242 n n C5B C4B NDP sing 243 n n C5B H51A NDP sing 244 n n C5B H52A NDP sing 245 n n C4B O4B NDP sing 246 n n C4B C3B NDP sing 247 n n C4B H4B NDP sing 248 n n O4B C1B NDP sing 249 n n C3B O3B NDP sing 250 n n C3B C2B NDP sing 251 n n C3B H3B NDP sing 252 n n O3B HO3A NDP sing 253 n n C2B O2B NDP sing 254 n n C2B C1B NDP sing 255 n n C2B H2B NDP sing 256 n n O2B P2B NDP sing 257 n n C1B N9A NDP sing 258 n n C1B H1B NDP sing 259 n n N9A C8A NDP sing 260 n y N9A C4A NDP sing 261 n y C8A N7A NDP doub 262 n y C8A H8A NDP sing 263 n n N7A C5A NDP sing 264 n y C5A C6A NDP sing 265 n y C5A C4A NDP doub 266 n y C6A N6A NDP sing 267 n n C6A N1A NDP doub 268 n y N6A H61A NDP sing 269 n n N6A H62A NDP sing 270 n n N1A C2A NDP sing 271 n y C2A N3A NDP doub 272 n y C2A H2A NDP sing 273 n n N3A C4A NDP sing 274 n y O3 PN NDP sing 275 n n PN O1N NDP doub 276 n n PN O2N NDP sing 277 n n PN O5D NDP sing 278 n n O2N H21N NDP sing 279 n n O5D C5D NDP sing 280 n n C5D C4D NDP sing 281 n n C5D H51N NDP sing 282 n n C5D H52N NDP sing 283 n n C4D O4D NDP sing 284 n n C4D C3D NDP sing 285 n n C4D H4D NDP sing 286 n n O4D C1D NDP sing 287 n n C3D O3D NDP sing 288 n n C3D C2D NDP sing 289 n n C3D H3D NDP sing 290 n n O3D HO3N NDP sing 291 n n C2D O2D NDP sing 292 n n C2D C1D NDP sing 293 n n C2D H2D NDP sing 294 n n O2D HO2N NDP sing 295 n n C1D N1N NDP sing 296 n n C1D H1D NDP sing 297 n n N1N C2N NDP sing 298 n n N1N C6N NDP sing 299 n n C2N C3N NDP doub 300 n n C2N H2N NDP sing 301 n n C3N C7N NDP sing 302 n n C3N C4N NDP sing 303 n n C7N O7N NDP doub 304 n n C7N N7N NDP sing 305 n n N7N H71N NDP sing 306 n n N7N H72N NDP sing 307 n n C4N C5N NDP sing 308 n n C4N H41N NDP sing 309 n n C4N H42N NDP sing 310 n n C5N C6N NDP doub 311 n n C5N H5N NDP sing 312 n n C6N H6N NDP sing 313 n n P2B O1X NDP doub 314 n n P2B O2X NDP sing 315 n n P2B O3X NDP sing 316 n n O2X HOP2 NDP sing 317 n n O3X HOP3 NDP sing 318 n n # _atom_sites.entry_id 2F2K _atom_sites.fract_transf_matrix[1][1] 0.021186 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000832 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 350 350 NDP NDP . C 3 TGG A 1 351 351 TGG TGG . D 4 HOH A 1 501 501 HOH HOH . D 4 HOH A 2 502 502 HOH HOH . D 4 HOH A 3 503 503 HOH HOH . D 4 HOH A 4 504 504 HOH HOH . D 4 HOH A 5 505 505 HOH HOH . D 4 HOH A 6 506 506 HOH HOH . D 4 HOH A 7 507 507 HOH HOH . D 4 HOH A 8 508 508 HOH HOH . D 4 HOH A 9 509 509 HOH HOH . D 4 HOH A 10 510 510 HOH HOH . D 4 HOH A 11 511 511 HOH HOH . D 4 HOH A 12 512 512 HOH HOH . D 4 HOH A 13 513 513 HOH HOH . D 4 HOH A 14 514 514 HOH HOH . D 4 HOH A 15 515 515 HOH HOH . D 4 HOH A 16 516 516 HOH HOH . D 4 HOH A 17 517 517 HOH HOH . D 4 HOH A 18 518 518 HOH HOH . D 4 HOH A 19 519 519 HOH HOH . D 4 HOH A 20 520 520 HOH HOH . D 4 HOH A 21 521 521 HOH HOH . D 4 HOH A 22 522 522 HOH HOH . D 4 HOH A 23 523 523 HOH HOH . D 4 HOH A 24 524 524 HOH HOH . D 4 HOH A 25 525 525 HOH HOH . D 4 HOH A 26 526 526 HOH HOH . D 4 HOH A 27 527 527 HOH HOH . D 4 HOH A 28 528 528 HOH HOH . D 4 HOH A 29 529 529 HOH HOH . D 4 HOH A 30 530 530 HOH HOH . D 4 HOH A 31 531 531 HOH HOH . D 4 HOH A 32 532 532 HOH HOH . D 4 HOH A 33 533 533 HOH HOH . D 4 HOH A 34 534 534 HOH HOH . D 4 HOH A 35 535 535 HOH HOH . D 4 HOH A 36 536 536 HOH HOH . D 4 HOH A 37 537 537 HOH HOH . D 4 HOH A 38 538 538 HOH HOH . D 4 HOH A 39 539 539 HOH HOH . D 4 HOH A 40 540 540 HOH HOH . D 4 HOH A 41 541 541 HOH HOH . D 4 HOH A 42 542 542 HOH HOH . D 4 HOH A 43 543 543 HOH HOH . D 4 HOH A 44 544 544 HOH HOH . D 4 HOH A 45 545 545 HOH HOH . D 4 HOH A 46 546 546 HOH HOH . D 4 HOH A 47 547 547 HOH HOH . D 4 HOH A 48 548 548 HOH HOH . D 4 HOH A 49 549 549 HOH HOH . D 4 HOH A 50 550 550 HOH HOH . D 4 HOH A 51 551 551 HOH HOH . D 4 HOH A 52 552 552 HOH HOH . D 4 HOH A 53 553 553 HOH HOH . D 4 HOH A 54 554 554 HOH HOH . D 4 HOH A 55 555 555 HOH HOH . D 4 HOH A 56 556 556 HOH HOH . D 4 HOH A 57 557 557 HOH HOH . D 4 HOH A 58 558 558 HOH HOH . D 4 HOH A 59 559 559 HOH HOH . D 4 HOH A 60 560 560 HOH HOH . D 4 HOH A 61 561 561 HOH HOH . D 4 HOH A 62 562 562 HOH HOH . D 4 HOH A 63 563 563 HOH HOH . D 4 HOH A 64 564 564 HOH HOH . D 4 HOH A 65 565 565 HOH HOH . D 4 HOH A 66 566 566 HOH HOH . D 4 HOH A 67 567 567 HOH HOH . D 4 HOH A 68 568 568 HOH HOH . D 4 HOH A 69 569 569 HOH HOH . D 4 HOH A 70 570 570 HOH HOH . D 4 HOH A 71 571 571 HOH HOH . D 4 HOH A 72 572 572 HOH HOH . D 4 HOH A 73 573 573 HOH HOH . D 4 HOH A 74 574 574 HOH HOH . D 4 HOH A 75 575 575 HOH HOH . D 4 HOH A 76 576 576 HOH HOH . D 4 HOH A 77 577 577 HOH HOH . D 4 HOH A 78 578 578 HOH HOH . D 4 HOH A 79 579 579 HOH HOH . D 4 HOH A 80 580 580 HOH HOH . D 4 HOH A 81 581 581 HOH HOH . D 4 HOH A 82 582 582 HOH HOH . D 4 HOH A 83 583 583 HOH HOH . D 4 HOH A 84 584 584 HOH HOH . D 4 HOH A 85 585 585 HOH HOH . D 4 HOH A 86 586 586 HOH HOH . D 4 HOH A 87 587 587 HOH HOH . D 4 HOH A 88 588 588 HOH HOH . D 4 HOH A 89 589 589 HOH HOH . D 4 HOH A 90 590 590 HOH HOH . D 4 HOH A 91 591 591 HOH HOH . D 4 HOH A 92 592 592 HOH HOH . D 4 HOH A 93 593 593 HOH HOH . D 4 HOH A 94 594 594 HOH HOH . D 4 HOH A 95 595 595 HOH HOH . D 4 HOH A 96 596 596 HOH HOH . D 4 HOH A 97 597 597 HOH HOH . D 4 HOH A 98 598 598 HOH HOH . D 4 HOH A 99 599 599 HOH HOH . D 4 HOH A 100 600 600 HOH HOH . D 4 HOH A 101 601 601 HOH HOH . D 4 HOH A 102 602 602 HOH HOH . D 4 HOH A 103 603 603 HOH HOH . D 4 HOH A 104 604 604 HOH HOH . D 4 HOH A 105 605 605 HOH HOH . D 4 HOH A 106 606 606 HOH HOH . D 4 HOH A 107 607 607 HOH HOH . D 4 HOH A 108 608 608 HOH HOH . D 4 HOH A 109 609 609 HOH HOH . D 4 HOH A 110 610 610 HOH HOH . D 4 HOH A 111 611 611 HOH HOH . D 4 HOH A 112 612 612 HOH HOH . D 4 HOH A 113 613 613 HOH HOH . D 4 HOH A 114 614 614 HOH HOH . D 4 HOH A 115 615 615 HOH HOH . D 4 HOH A 116 616 616 HOH HOH . D 4 HOH A 117 617 617 HOH HOH . D 4 HOH A 118 618 618 HOH HOH . D 4 HOH A 119 619 619 HOH HOH . D 4 HOH A 120 620 620 HOH HOH . D 4 HOH A 121 621 621 HOH HOH . D 4 HOH A 122 622 622 HOH HOH . D 4 HOH A 123 623 623 HOH HOH . D 4 HOH A 124 624 624 HOH HOH . D 4 HOH A 125 625 625 HOH HOH . D 4 HOH A 126 626 626 HOH HOH . D 4 HOH A 127 627 627 HOH HOH . D 4 HOH A 128 628 628 HOH HOH . D 4 HOH A 129 629 629 HOH HOH . D 4 HOH A 130 630 630 HOH HOH . D 4 HOH A 131 631 631 HOH HOH . D 4 HOH A 132 632 632 HOH HOH . D 4 HOH A 133 633 633 HOH HOH . D 4 HOH A 134 634 634 HOH HOH . D 4 HOH A 135 635 635 HOH HOH . D 4 HOH A 136 636 636 HOH HOH . D 4 HOH A 137 637 637 HOH HOH . D 4 HOH A 138 638 638 HOH HOH . D 4 HOH A 139 639 639 HOH HOH . D 4 HOH A 140 640 640 HOH HOH . D 4 HOH A 141 641 641 HOH HOH . D 4 HOH A 142 642 642 HOH HOH . D 4 HOH A 143 643 643 HOH HOH . D 4 HOH A 144 644 644 HOH HOH . D 4 HOH A 145 645 645 HOH HOH . D 4 HOH A 146 646 646 HOH HOH . D 4 HOH A 147 647 647 HOH HOH . D 4 HOH A 148 648 648 HOH HOH . D 4 HOH A 149 649 649 HOH HOH . D 4 HOH A 150 650 650 HOH HOH . D 4 HOH A 151 651 651 HOH HOH . D 4 HOH A 152 652 652 HOH HOH . D 4 HOH A 153 653 653 HOH HOH . D 4 HOH A 154 654 654 HOH HOH . D 4 HOH A 155 655 655 HOH HOH . D 4 HOH A 156 656 656 HOH HOH . D 4 HOH A 157 657 657 HOH HOH . D 4 HOH A 158 658 658 HOH HOH . D 4 HOH A 159 659 659 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NDP . . . B 2 49.697 38.738 23.674 1 11.35 ? PA NDP 350 A 1 HETATM 2 O O1A NDP . . . B 2 49.203 37.644 24.548 1 11.81 ? O1A NDP 350 A 1 HETATM 3 O O2A NDP . . . B 2 50.668 38.402 22.61 1 13.73 ? O2A NDP 350 A 1 HETATM 4 O O5B NDP . . . B 2 50.296 39.886 24.626 1 15.61 ? O5B NDP 350 A 1 HETATM 5 C C5B NDP . . . B 2 50.704 41.154 24.11 1 17.21 ? C5B NDP 350 A 1 HETATM 6 C C4B NDP . . . B 2 50.954 42.074 25.304 1 16.11 ? C4B NDP 350 A 1 HETATM 7 O O4B NDP . . . B 2 51.986 41.422 26.066 1 18.44 ? O4B NDP 350 A 1 HETATM 8 C C3B NDP . . . B 2 51.486 43.438 24.854 1 15.78 ? C3B NDP 350 A 1 HETATM 9 O O3B NDP . . . B 2 51.012 44.471 25.722 1 13.97 ? O3B NDP 350 A 1 HETATM 10 C C2B NDP . . . B 2 53.002 43.271 24.97 1 15.04 ? C2B NDP 350 A 1 HETATM 11 O O2B NDP . . . B 2 53.574 44.523 25.356 1 16.05 ? O2B NDP 350 A 1 HETATM 12 C C1B NDP . . . B 2 53.098 42.325 26.172 1 17.03 ? C1B NDP 350 A 1 HETATM 13 N N9A NDP . . . B 2 54.372 41.564 26.187 1 15.04 ? N9A NDP 350 A 1 HETATM 14 C C8A NDP . . . B 2 54.905 40.945 25.135 1 16.57 ? C8A NDP 350 A 1 HETATM 15 N N7A NDP . . . B 2 56.05 40.364 25.483 1 14.81 ? N7A NDP 350 A 1 HETATM 16 C C5A NDP . . . B 2 56.25 40.61 26.774 1 14.27 ? C5A NDP 350 A 1 HETATM 17 C C6A NDP . . . B 2 57.26 40.281 27.673 1 15.58 ? C6A NDP 350 A 1 HETATM 18 N N6A NDP . . . B 2 58.258 39.486 27.295 1 12.52 ? N6A NDP 350 A 1 HETATM 19 N N1A NDP . . . B 2 57.177 40.73 28.936 1 17.72 ? N1A NDP 350 A 1 HETATM 20 C C2A NDP . . . B 2 56.15 41.461 29.339 1 17.48 ? C2A NDP 350 A 1 HETATM 21 N N3A NDP . . . B 2 55.17 41.776 28.508 1 17.59 ? N3A NDP 350 A 1 HETATM 22 C C4A NDP . . . B 2 55.185 41.377 27.225 1 14.44 ? C4A NDP 350 A 1 HETATM 23 O O3 NDP . . . B 2 48.394 39.492 23.118 1 13.91 ? O3 NDP 350 A 1 HETATM 24 P PN NDP . . . B 2 47.784 39.514 21.631 1 14.76 ? PN NDP 350 A 1 HETATM 25 O O1N NDP . . . B 2 48.417 40.597 20.843 1 13.21 ? O1N NDP 350 A 1 HETATM 26 O O2N NDP . . . B 2 46.312 39.555 21.807 1 15.97 ? O2N NDP 350 A 1 HETATM 27 O O5D NDP . . . B 2 48.127 38.089 20.96 1 15.97 ? O5D NDP 350 A 1 HETATM 28 C C5D NDP . . . B 2 49.216 37.914 20.046 1 12.99 ? C5D NDP 350 A 1 HETATM 29 C C4D NDP . . . B 2 48.734 37.931 18.591 1 12.11 ? C4D NDP 350 A 1 HETATM 30 O O4D NDP . . . B 2 47.77 36.898 18.324 1 12.37 ? O4D NDP 350 A 1 HETATM 31 C C3D NDP . . . B 2 47.963 39.183 18.185 1 12.85 ? C3D NDP 350 A 1 HETATM 32 O O3D NDP . . . B 2 48.819 40.32 18.049 1 14.5 ? O3D NDP 350 A 1 HETATM 33 C C2D NDP . . . B 2 47.487 38.707 16.814 1 13.61 ? C2D NDP 350 A 1 HETATM 34 O O2D NDP . . . B 2 48.556 38.655 15.862 1 14.38 ? O2D NDP 350 A 1 HETATM 35 C C1D NDP . . . B 2 47.005 37.298 17.167 1 12.61 ? C1D NDP 350 A 1 HETATM 36 N N1N NDP . . . B 2 45.567 37.347 17.526 1 13.2 ? N1N NDP 350 A 1 HETATM 37 C C2N NDP . . . B 2 44.62 36.768 16.668 1 11.52 ? C2N NDP 350 A 1 HETATM 38 C C3N NDP . . . B 2 43.272 36.819 17.012 1 11.43 ? C3N NDP 350 A 1 HETATM 39 C C7N NDP . . . B 2 42.206 36.195 16.108 1 13.15 ? C7N NDP 350 A 1 HETATM 40 O O7N NDP . . . B 2 41.025 36.523 16.226 1 13.9 ? O7N NDP 350 A 1 HETATM 41 N N7N NDP . . . B 2 42.65 35.303 15.224 1 10.89 ? N7N NDP 350 A 1 HETATM 42 C C4N NDP . . . B 2 42.877 37.461 18.181 1 11.13 ? C4N NDP 350 A 1 HETATM 43 C C5N NDP . . . B 2 43.808 38.044 19.036 1 12.31 ? C5N NDP 350 A 1 HETATM 44 C C6N NDP . . . B 2 45.159 37.984 18.707 1 11.11 ? C6N NDP 350 A 1 HETATM 45 P P2B NDP . . . B 2 54.325 45.509 24.328 1 15.21 ? P2B NDP 350 A 1 HETATM 46 O O1X NDP . . . B 2 55.86 45.039 24.419 1 12.36 ? O1X NDP 350 A 1 HETATM 47 O O2X NDP . . . B 2 54.178 46.875 24.878 1 13.93 ? O2X NDP 350 A 1 HETATM 48 O O3X NDP . . . B 2 53.813 45.253 22.962 1 14.7 ? O3X NDP 350 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 509 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 48 #