data_2F2K # _model_server_result.job_id S4VMYuM75dubPgZlv4HJlA _model_server_result.datetime_utc '2024-12-22 02:02:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f2k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":351}' # _entry.id 2F2K # _exptl.entry_id 2F2K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 423.396 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GAMMA-GLUTAMYL-S-(1,2-DICARBOXYETHYL)CYSTEINYLGLYCINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.25 _cell.angle_gamma 90 _cell.entry_id 2F2K _cell.length_a 47.2 _cell.length_b 66.7 _cell.length_c 49.3 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F2K _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H21 N3 O10 S' _chem_comp.formula_weight 423.396 _chem_comp.id TGG _chem_comp.mon_nstd_flag . _chem_comp.name GAMMA-GLUTAMYL-S-(1,2-DICARBOXYETHYL)CYSTEINYLGLYCINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OC1 CO1 TGG doub 372 n n CO1 OT1 TGG sing 373 n n CO1 CA1 TGG sing 374 n n OT1 HT1 TGG sing 375 n n CA1 NN1 TGG sing 376 n n CA1 CB1 TGG sing 377 n n CA1 HA1 TGG sing 378 n n NN1 HN11 TGG sing 379 n n NN1 HN12 TGG sing 380 n n CB1 CG1 TGG sing 381 n n CB1 HB11 TGG sing 382 n n CB1 HB12 TGG sing 383 n n CG1 CD1 TGG sing 384 n n CG1 HG11 TGG sing 385 n n CG1 HG12 TGG sing 386 n n CD1 OE1 TGG doub 387 n n CD1 NN2 TGG sing 388 n n NN2 CA2 TGG sing 389 n n NN2 HN2 TGG sing 390 n n CA2 CO2 TGG sing 391 n n CA2 CB2 TGG sing 392 n n CA2 HA2 TGG sing 393 n n CO2 OC2 TGG doub 394 n n CO2 NN3 TGG sing 395 n n NN3 CA3 TGG sing 396 n n NN3 HN3 TGG sing 397 n n CA3 CO3 TGG sing 398 n n CA3 HA31 TGG sing 399 n n CA3 HA32 TGG sing 400 n n CO3 OC3 TGG doub 401 n n CO3 OT3 TGG sing 402 n n OT3 HT3 TGG sing 403 n n CB2 SG2 TGG sing 404 n n CB2 HB21 TGG sing 405 n n CB2 HB22 TGG sing 406 n n SG2 CD2 TGG sing 407 n n CD2 CE2 TGG sing 408 n n CD2 CF2 TGG sing 409 n n CD2 HD2 TGG sing 410 n n CE2 OE2 TGG doub 411 n n CE2 OF2 TGG sing 412 n n OF2 HF2 TGG sing 413 n n CF2 CH2 TGG sing 414 n n CF2 HF21 TGG sing 415 n n CF2 HF22 TGG sing 416 n n CH2 OI2 TGG doub 417 n n CH2 OJ2 TGG sing 418 n n OJ2 HJ2 TGG sing 419 n n # _atom_sites.entry_id 2F2K _atom_sites.fract_transf_matrix[1][1] 0.021186 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000832 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014993 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.0203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NDP A 1 350 350 NDP NDP . C 3 TGG A 1 351 351 TGG TGG . D 4 HOH A 1 501 501 HOH HOH . D 4 HOH A 2 502 502 HOH HOH . D 4 HOH A 3 503 503 HOH HOH . D 4 HOH A 4 504 504 HOH HOH . D 4 HOH A 5 505 505 HOH HOH . D 4 HOH A 6 506 506 HOH HOH . D 4 HOH A 7 507 507 HOH HOH . D 4 HOH A 8 508 508 HOH HOH . D 4 HOH A 9 509 509 HOH HOH . D 4 HOH A 10 510 510 HOH HOH . D 4 HOH A 11 511 511 HOH HOH . D 4 HOH A 12 512 512 HOH HOH . D 4 HOH A 13 513 513 HOH HOH . D 4 HOH A 14 514 514 HOH HOH . D 4 HOH A 15 515 515 HOH HOH . D 4 HOH A 16 516 516 HOH HOH . D 4 HOH A 17 517 517 HOH HOH . D 4 HOH A 18 518 518 HOH HOH . D 4 HOH A 19 519 519 HOH HOH . D 4 HOH A 20 520 520 HOH HOH . D 4 HOH A 21 521 521 HOH HOH . D 4 HOH A 22 522 522 HOH HOH . D 4 HOH A 23 523 523 HOH HOH . D 4 HOH A 24 524 524 HOH HOH . D 4 HOH A 25 525 525 HOH HOH . D 4 HOH A 26 526 526 HOH HOH . D 4 HOH A 27 527 527 HOH HOH . D 4 HOH A 28 528 528 HOH HOH . D 4 HOH A 29 529 529 HOH HOH . D 4 HOH A 30 530 530 HOH HOH . D 4 HOH A 31 531 531 HOH HOH . D 4 HOH A 32 532 532 HOH HOH . D 4 HOH A 33 533 533 HOH HOH . D 4 HOH A 34 534 534 HOH HOH . D 4 HOH A 35 535 535 HOH HOH . D 4 HOH A 36 536 536 HOH HOH . D 4 HOH A 37 537 537 HOH HOH . D 4 HOH A 38 538 538 HOH HOH . D 4 HOH A 39 539 539 HOH HOH . D 4 HOH A 40 540 540 HOH HOH . D 4 HOH A 41 541 541 HOH HOH . D 4 HOH A 42 542 542 HOH HOH . D 4 HOH A 43 543 543 HOH HOH . D 4 HOH A 44 544 544 HOH HOH . D 4 HOH A 45 545 545 HOH HOH . D 4 HOH A 46 546 546 HOH HOH . D 4 HOH A 47 547 547 HOH HOH . D 4 HOH A 48 548 548 HOH HOH . D 4 HOH A 49 549 549 HOH HOH . D 4 HOH A 50 550 550 HOH HOH . D 4 HOH A 51 551 551 HOH HOH . D 4 HOH A 52 552 552 HOH HOH . D 4 HOH A 53 553 553 HOH HOH . D 4 HOH A 54 554 554 HOH HOH . D 4 HOH A 55 555 555 HOH HOH . D 4 HOH A 56 556 556 HOH HOH . D 4 HOH A 57 557 557 HOH HOH . D 4 HOH A 58 558 558 HOH HOH . D 4 HOH A 59 559 559 HOH HOH . D 4 HOH A 60 560 560 HOH HOH . D 4 HOH A 61 561 561 HOH HOH . D 4 HOH A 62 562 562 HOH HOH . D 4 HOH A 63 563 563 HOH HOH . D 4 HOH A 64 564 564 HOH HOH . D 4 HOH A 65 565 565 HOH HOH . D 4 HOH A 66 566 566 HOH HOH . D 4 HOH A 67 567 567 HOH HOH . D 4 HOH A 68 568 568 HOH HOH . D 4 HOH A 69 569 569 HOH HOH . D 4 HOH A 70 570 570 HOH HOH . D 4 HOH A 71 571 571 HOH HOH . D 4 HOH A 72 572 572 HOH HOH . D 4 HOH A 73 573 573 HOH HOH . D 4 HOH A 74 574 574 HOH HOH . D 4 HOH A 75 575 575 HOH HOH . D 4 HOH A 76 576 576 HOH HOH . D 4 HOH A 77 577 577 HOH HOH . D 4 HOH A 78 578 578 HOH HOH . D 4 HOH A 79 579 579 HOH HOH . D 4 HOH A 80 580 580 HOH HOH . D 4 HOH A 81 581 581 HOH HOH . D 4 HOH A 82 582 582 HOH HOH . D 4 HOH A 83 583 583 HOH HOH . D 4 HOH A 84 584 584 HOH HOH . D 4 HOH A 85 585 585 HOH HOH . D 4 HOH A 86 586 586 HOH HOH . D 4 HOH A 87 587 587 HOH HOH . D 4 HOH A 88 588 588 HOH HOH . D 4 HOH A 89 589 589 HOH HOH . D 4 HOH A 90 590 590 HOH HOH . D 4 HOH A 91 591 591 HOH HOH . D 4 HOH A 92 592 592 HOH HOH . D 4 HOH A 93 593 593 HOH HOH . D 4 HOH A 94 594 594 HOH HOH . D 4 HOH A 95 595 595 HOH HOH . D 4 HOH A 96 596 596 HOH HOH . D 4 HOH A 97 597 597 HOH HOH . D 4 HOH A 98 598 598 HOH HOH . D 4 HOH A 99 599 599 HOH HOH . D 4 HOH A 100 600 600 HOH HOH . D 4 HOH A 101 601 601 HOH HOH . D 4 HOH A 102 602 602 HOH HOH . D 4 HOH A 103 603 603 HOH HOH . D 4 HOH A 104 604 604 HOH HOH . D 4 HOH A 105 605 605 HOH HOH . D 4 HOH A 106 606 606 HOH HOH . D 4 HOH A 107 607 607 HOH HOH . D 4 HOH A 108 608 608 HOH HOH . D 4 HOH A 109 609 609 HOH HOH . D 4 HOH A 110 610 610 HOH HOH . D 4 HOH A 111 611 611 HOH HOH . D 4 HOH A 112 612 612 HOH HOH . D 4 HOH A 113 613 613 HOH HOH . D 4 HOH A 114 614 614 HOH HOH . D 4 HOH A 115 615 615 HOH HOH . D 4 HOH A 116 616 616 HOH HOH . D 4 HOH A 117 617 617 HOH HOH . D 4 HOH A 118 618 618 HOH HOH . D 4 HOH A 119 619 619 HOH HOH . D 4 HOH A 120 620 620 HOH HOH . D 4 HOH A 121 621 621 HOH HOH . D 4 HOH A 122 622 622 HOH HOH . D 4 HOH A 123 623 623 HOH HOH . D 4 HOH A 124 624 624 HOH HOH . D 4 HOH A 125 625 625 HOH HOH . D 4 HOH A 126 626 626 HOH HOH . D 4 HOH A 127 627 627 HOH HOH . D 4 HOH A 128 628 628 HOH HOH . D 4 HOH A 129 629 629 HOH HOH . D 4 HOH A 130 630 630 HOH HOH . D 4 HOH A 131 631 631 HOH HOH . D 4 HOH A 132 632 632 HOH HOH . D 4 HOH A 133 633 633 HOH HOH . D 4 HOH A 134 634 634 HOH HOH . D 4 HOH A 135 635 635 HOH HOH . D 4 HOH A 136 636 636 HOH HOH . D 4 HOH A 137 637 637 HOH HOH . D 4 HOH A 138 638 638 HOH HOH . D 4 HOH A 139 639 639 HOH HOH . D 4 HOH A 140 640 640 HOH HOH . D 4 HOH A 141 641 641 HOH HOH . D 4 HOH A 142 642 642 HOH HOH . D 4 HOH A 143 643 643 HOH HOH . D 4 HOH A 144 644 644 HOH HOH . D 4 HOH A 145 645 645 HOH HOH . D 4 HOH A 146 646 646 HOH HOH . D 4 HOH A 147 647 647 HOH HOH . D 4 HOH A 148 648 648 HOH HOH . D 4 HOH A 149 649 649 HOH HOH . D 4 HOH A 150 650 650 HOH HOH . D 4 HOH A 151 651 651 HOH HOH . D 4 HOH A 152 652 652 HOH HOH . D 4 HOH A 153 653 653 HOH HOH . D 4 HOH A 154 654 654 HOH HOH . D 4 HOH A 155 655 655 HOH HOH . D 4 HOH A 156 656 656 HOH HOH . D 4 HOH A 157 657 657 HOH HOH . D 4 HOH A 158 658 658 HOH HOH . D 4 HOH A 159 659 659 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O OC1 TGG . . . C 3 38.273 48.019 15.93 1 123.37 ? OC1 TGG 351 A 1 HETATM 2 C CO1 TGG . . . C 3 37.893 46.928 15.508 1 119.26 ? CO1 TGG 351 A 1 HETATM 3 O OT1 TGG . . . C 3 37.373 46.873 14.394 1 26.5 ? OT1 TGG 351 A 1 HETATM 4 C CA1 TGG . . . C 3 38.117 45.661 16.34 1 21.08 ? CA1 TGG 351 A 1 HETATM 5 N NN1 TGG . . . C 3 39.49 45.188 16.108 1 36.96 ? NN1 TGG 351 A 1 HETATM 6 C CB1 TGG . . . C 3 37.945 45.934 17.837 1 102.14 ? CB1 TGG 351 A 1 HETATM 7 C CG1 TGG . . . C 3 36.485 46.055 18.288 1 105.01 ? CG1 TGG 351 A 1 HETATM 8 C CD1 TGG . . . C 3 35.795 44.702 18.484 1 141.11 ? CD1 TGG 351 A 1 HETATM 9 O OE1 TGG . . . C 3 34.57 44.608 18.408 1 102.79 ? OE1 TGG 351 A 1 HETATM 10 N NN2 TGG . . . C 3 36.608 43.688 18.772 1 136.21 ? NN2 TGG 351 A 1 HETATM 11 C CA2 TGG . . . C 3 36.13 42.315 18.999 1 74.34 ? CA2 TGG 351 A 1 HETATM 12 C CO2 TGG . . . C 3 36.013 42.092 20.51 1 86.19 ? CO2 TGG 351 A 1 HETATM 13 O OC2 TGG . . . C 3 36.991 42.249 21.24 1 152.84 ? OC2 TGG 351 A 1 HETATM 14 N NN3 TGG . . . C 3 34.812 41.739 20.962 1 124.33 ? NN3 TGG 351 A 1 HETATM 15 C CA3 TGG . . . C 3 34.55 41.492 22.389 1 15.15 ? CA3 TGG 351 A 1 HETATM 16 C CO3 TGG . . . C 3 33.83 42.703 22.987 1 61.32 ? CO3 TGG 351 A 1 HETATM 17 O OC3 TGG . . . C 3 32.62 42.855 22.822 1 95.07 ? OC3 TGG 351 A 1 HETATM 18 O OT3 TGG . . . C 3 34.451 43.544 23.636 1 45.82 ? OT3 TGG 351 A 1 HETATM 19 C CB2 TGG . . . C 3 37.12 41.324 18.376 1 92.61 ? CB2 TGG 351 A 1 HETATM 20 S SG2 TGG . . . C 3 38.712 41.164 19.27 1 65.24 ? SG2 TGG 351 A 1 HETATM 21 C CD2 TGG . . . C 3 40.004 41.109 17.971 1 85.71 ? CD2 TGG 351 A 1 HETATM 22 C CE2 TGG . . . C 3 39.575 41.863 16.711 1 67.75 ? CE2 TGG 351 A 1 HETATM 23 O OE2 TGG . . . C 3 39.526 43.091 16.722 1 46.66 ? OE2 TGG 351 A 1 HETATM 24 O OF2 TGG . . . C 3 39.294 41.25 15.681 1 33.06 ? OF2 TGG 351 A 1 HETATM 25 C CF2 TGG . . . C 3 40.39 39.673 17.604 1 80.01 ? CF2 TGG 351 A 1 HETATM 26 C CH2 TGG . . . C 3 41.59 39.631 16.654 1 31.02 ? CH2 TGG 351 A 1 HETATM 27 O OI2 TGG . . . C 3 42.645 40.193 16.943 1 35.02 ? OI2 TGG 351 A 1 HETATM 28 O OJ2 TGG . . . C 3 41.524 39.017 15.592 1 61.81 ? OJ2 TGG 351 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 28 #