data_2F38 # _model_server_result.job_id Dm0ANGErKz2PwoggCER9Fg _model_server_result.datetime_utc '2024-11-04 22:18:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 2f38 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":325}' # _entry.id 2F38 # _exptl.entry_id 2F38 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 415.566 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5Z)-7-{(1R,2R,3R,5S)-3,5-DIHYDROXY-2-[(1E,3S)-3-HYDROXY-5-PHENYLPENT-1-ENYL]CYCLOPENTYL}-N-ETHYLHEPT-5-ENAMIDE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.2 _cell.angle_gamma 90 _cell.entry_id 2F38 _cell.length_a 44.27 _cell.length_b 78.16 _cell.length_c 48.89 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2F38 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H37 N O4' _chem_comp.formula_weight 415.566 _chem_comp.id 15M _chem_comp.mon_nstd_flag . _chem_comp.name (5Z)-7-{(1R,2R,3R,5S)-3,5-DIHYDROXY-2-[(1E,3S)-3-HYDROXY-5-PHENYLPENT-1-ENYL]CYCLOPENTYL}-N-ETHYLHEPT-5-ENAMIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BIMATOPROST # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 15M sing 1 n n C1 N 15M sing 2 n n C1 O1 15M doub 3 n n C2 C3 15M sing 4 n n C2 H21A 15M sing 5 n n C2 H22A 15M sing 6 n n C3 C4 15M sing 7 n n C3 H31 15M sing 8 n n C3 H32 15M sing 9 n n C4 C5 15M sing 10 n n C4 H41 15M sing 11 n n C4 H42 15M sing 12 n n C5 C6 15M doub 13 z n C5 H5 15M sing 14 n n C6 C7 15M sing 15 n n C6 H6 15M sing 16 n n C7 C8 15M sing 17 n n C7 H71 15M sing 18 n n C7 H72 15M sing 19 n n C8 C9 15M sing 20 n n C8 C12 15M sing 21 n n C8 H8 15M sing 22 n n C9 C10 15M sing 23 n n C9 O9 15M sing 24 n n C9 H9 15M sing 25 n n C10 C11 15M sing 26 n n C10 H101 15M sing 27 n n C10 H102 15M sing 28 n n C11 C12 15M sing 29 n n C11 O11 15M sing 30 n n C11 H11 15M sing 31 n n C12 C13 15M sing 32 n n C12 H12 15M sing 33 n n C13 C14 15M doub 34 e n C13 H13 15M sing 35 n n C14 C15 15M sing 36 n n C14 H14 15M sing 37 n n C15 C16 15M sing 38 n n C15 O15 15M sing 39 n n C15 H15 15M sing 40 n n C16 C17 15M sing 41 n n C16 H161 15M sing 42 n n C16 H162 15M sing 43 n n C17 C18 15M sing 44 n n C17 H171 15M sing 45 n n C17 H172 15M sing 46 n n C18 C19 15M sing 47 n y C18 C23 15M doub 48 n y C19 C20 15M doub 49 n y C19 H19 15M sing 50 n n C20 C21 15M sing 51 n y C20 H20 15M sing 52 n n C21 C22 15M doub 53 n y C21 H21 15M sing 54 n n C22 C23 15M sing 55 n y C22 H22 15M sing 56 n n C23 H23 15M sing 57 n n C24 C25 15M sing 58 n n C24 H241 15M sing 59 n n C24 H242 15M sing 60 n n C24 H243 15M sing 61 n n C25 N 15M sing 62 n n C25 H251 15M sing 63 n n C25 H252 15M sing 64 n n N HN 15M sing 65 n n O9 HO9 15M sing 66 n n O11 H1 15M sing 67 n n O15 H2 15M sing 68 n n # _atom_sites.entry_id 2F38 _atom_sites.fract_transf_matrix[1][1] 0.022589 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004064 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012794 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020783 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 324 324 NAP NAP . C 3 15M A 1 325 325 15M BMP . D 4 HOH A 1 1001 1001 HOH H2O . D 4 HOH A 2 1002 1002 HOH H2O . D 4 HOH A 3 1003 1003 HOH H2O . D 4 HOH A 4 1004 1004 HOH H2O . D 4 HOH A 5 1005 1005 HOH H2O . D 4 HOH A 6 1006 1006 HOH H2O . D 4 HOH A 7 1007 1007 HOH H2O . D 4 HOH A 8 1008 1008 HOH H2O . D 4 HOH A 9 1009 1009 HOH H2O . D 4 HOH A 10 1010 1010 HOH H2O . D 4 HOH A 11 1011 1011 HOH H2O . D 4 HOH A 12 1012 1012 HOH H2O . D 4 HOH A 13 1013 1013 HOH H2O . D 4 HOH A 14 1014 1014 HOH H2O . D 4 HOH A 15 1015 1015 HOH H2O . D 4 HOH A 16 1016 1016 HOH H2O . D 4 HOH A 17 1017 1017 HOH H2O . D 4 HOH A 18 1018 1018 HOH H2O . D 4 HOH A 19 1019 1019 HOH H2O . D 4 HOH A 20 1020 1020 HOH H2O . D 4 HOH A 21 1021 1021 HOH H2O . D 4 HOH A 22 1022 1022 HOH H2O . D 4 HOH A 23 1023 1023 HOH H2O . D 4 HOH A 24 1024 1024 HOH H2O . D 4 HOH A 25 1025 1025 HOH H2O . D 4 HOH A 26 1026 1026 HOH H2O . D 4 HOH A 27 1027 1027 HOH H2O . D 4 HOH A 28 1028 1028 HOH H2O . D 4 HOH A 29 1029 1029 HOH H2O . D 4 HOH A 30 1030 1030 HOH H2O . D 4 HOH A 31 1031 1031 HOH H2O . D 4 HOH A 32 1032 1032 HOH H2O . D 4 HOH A 33 1033 1033 HOH H2O . D 4 HOH A 34 1034 1034 HOH H2O . D 4 HOH A 35 1035 1035 HOH H2O . D 4 HOH A 36 1036 1036 HOH H2O . D 4 HOH A 37 1037 1037 HOH H2O . D 4 HOH A 38 1038 1038 HOH H2O . D 4 HOH A 39 1039 1039 HOH H2O . D 4 HOH A 40 1040 1040 HOH H2O . D 4 HOH A 41 1041 1041 HOH H2O . D 4 HOH A 42 1042 1042 HOH H2O . D 4 HOH A 43 1043 1043 HOH H2O . D 4 HOH A 44 1044 1044 HOH H2O . D 4 HOH A 45 1045 1045 HOH H2O . D 4 HOH A 46 1046 1046 HOH H2O . D 4 HOH A 47 1047 1047 HOH H2O . D 4 HOH A 48 1048 1048 HOH H2O . D 4 HOH A 49 1049 1049 HOH H2O . D 4 HOH A 50 1050 1050 HOH H2O . D 4 HOH A 51 1051 1051 HOH H2O . D 4 HOH A 52 1052 1052 HOH H2O . D 4 HOH A 53 1053 1053 HOH H2O . D 4 HOH A 54 1054 1054 HOH H2O . D 4 HOH A 55 1055 1055 HOH H2O . D 4 HOH A 56 1056 1056 HOH H2O . D 4 HOH A 57 1057 1057 HOH H2O . D 4 HOH A 58 1058 1058 HOH H2O . D 4 HOH A 59 1059 1059 HOH H2O . D 4 HOH A 60 1060 1060 HOH H2O . D 4 HOH A 61 1061 1061 HOH H2O . D 4 HOH A 62 1062 1062 HOH H2O . D 4 HOH A 63 1063 1063 HOH H2O . D 4 HOH A 64 1064 1064 HOH H2O . D 4 HOH A 65 1065 1065 HOH H2O . D 4 HOH A 66 1066 1066 HOH H2O . D 4 HOH A 67 1067 1067 HOH H2O . D 4 HOH A 68 1068 1068 HOH H2O . D 4 HOH A 69 1069 1069 HOH H2O . D 4 HOH A 70 1070 1070 HOH H2O . D 4 HOH A 71 1071 1071 HOH H2O . D 4 HOH A 72 1072 1072 HOH H2O . D 4 HOH A 73 1073 1073 HOH H2O . D 4 HOH A 74 1074 1074 HOH H2O . D 4 HOH A 75 1075 1075 HOH H2O . D 4 HOH A 76 1076 1076 HOH H2O . D 4 HOH A 77 1077 1077 HOH H2O . D 4 HOH A 78 1078 1078 HOH H2O . D 4 HOH A 79 1079 1079 HOH H2O . D 4 HOH A 80 1080 1080 HOH H2O . D 4 HOH A 81 1081 1081 HOH H2O . D 4 HOH A 82 1082 1082 HOH H2O . D 4 HOH A 83 1083 1083 HOH H2O . D 4 HOH A 84 1084 1084 HOH H2O . D 4 HOH A 85 1085 1085 HOH H2O . D 4 HOH A 86 1086 1086 HOH H2O . D 4 HOH A 87 1087 1087 HOH H2O . D 4 HOH A 88 1088 1088 HOH H2O . D 4 HOH A 89 1089 1089 HOH H2O . D 4 HOH A 90 1090 1090 HOH H2O . D 4 HOH A 91 1091 1091 HOH H2O . D 4 HOH A 92 1092 1092 HOH H2O . D 4 HOH A 93 1093 1093 HOH H2O . D 4 HOH A 94 1094 1094 HOH H2O . D 4 HOH A 95 1095 1095 HOH H2O . D 4 HOH A 96 1096 1096 HOH H2O . D 4 HOH A 97 1097 1097 HOH H2O . D 4 HOH A 98 1098 1098 HOH H2O . D 4 HOH A 99 1099 1099 HOH H2O . D 4 HOH A 100 1100 1100 HOH H2O . D 4 HOH A 101 1101 1101 HOH H2O . D 4 HOH A 102 1102 1102 HOH H2O . D 4 HOH A 103 1103 1103 HOH H2O . D 4 HOH A 104 1104 1104 HOH H2O . D 4 HOH A 105 1105 1105 HOH H2O . D 4 HOH A 106 1106 1106 HOH H2O . D 4 HOH A 107 1107 1107 HOH H2O . D 4 HOH A 108 1108 1108 HOH H2O . D 4 HOH A 109 1109 1109 HOH H2O . D 4 HOH A 110 1110 1110 HOH H2O . D 4 HOH A 111 1111 1111 HOH H2O . D 4 HOH A 112 1112 1112 HOH H2O . D 4 HOH A 113 1113 1113 HOH H2O . D 4 HOH A 114 1114 1114 HOH H2O . D 4 HOH A 115 1115 1115 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 15M . . . C 3 25.446 -11.684 37.454 1 8.88 ? C1 15M 325 A 1 HETATM 2 C C2 15M . . . C 3 24.088 -11.116 37.941 1 9.28 ? C2 15M 325 A 1 HETATM 3 C C3 15M . . . C 3 22.959 -12.097 37.567 1 10.09 ? C3 15M 325 A 1 HETATM 4 C C4 15M . . . C 3 21.558 -11.45 37.729 1 11.81 ? C4 15M 325 A 1 HETATM 5 C C5 15M . . . C 3 21.191 -11.16 39.16 1 12.26 ? C5 15M 325 A 1 HETATM 6 C C6 15M . . . C 3 20.785 -12.102 40.067 1 14.43 ? C6 15M 325 A 1 HETATM 7 C C7 15M . . . C 3 20.668 -13.573 39.742 1 14.14 ? C7 15M 325 A 1 HETATM 8 C C8 15M . . . C 3 19.239 -14.207 39.877 1 13.93 ? C8 15M 325 A 1 HETATM 9 C C9 15M . . . C 3 18.708 -14.408 41.322 1 13.97 ? C9 15M 325 A 1 HETATM 10 C C10 15M . . . C 3 17.281 -13.829 41.365 1 15.91 ? C10 15M 325 A 1 HETATM 11 C C11 15M . . . C 3 16.855 -13.587 39.914 1 15.31 ? C11 15M 325 A 1 HETATM 12 C C12 15M . . . C 3 18.153 -13.416 39.118 1 14.87 ? C12 15M 325 A 1 HETATM 13 C C13 15M . . . C 3 18 -13.96 37.753 1 15.7 ? C13 15M 325 A 1 HETATM 14 C C14 15M . . . C 3 17.83 -13.138 36.718 1 16.11 ? C14 15M 325 A 1 HETATM 15 C C15 15M . . . C 3 17.664 -13.698 35.352 1 17.69 ? C15 15M 325 A 1 HETATM 16 C C16 15M . . . C 3 18.632 -13.002 34.391 1 17.29 ? C16 15M 325 A 1 HETATM 17 C C17 15M . . . C 3 20.069 -13.548 34.571 1 17.47 ? C17 15M 325 A 1 HETATM 18 C C18 15M . . . C 3 20.947 -13.043 33.466 1 18.62 ? C18 15M 325 A 1 HETATM 19 C C19 15M . . . C 3 21.402 -11.689 33.466 1 18.04 ? C19 15M 325 A 1 HETATM 20 C C20 15M . . . C 3 22.227 -11.208 32.417 1 15.14 ? C20 15M 325 A 1 HETATM 21 C C21 15M . . . C 3 22.603 -12.086 31.35 1 16.78 ? C21 15M 325 A 1 HETATM 22 C C22 15M . . . C 3 22.156 -13.44 31.337 1 16.89 ? C22 15M 325 A 1 HETATM 23 C C23 15M . . . C 3 21.329 -13.92 32.398 1 17.23 ? C23 15M 325 A 1 HETATM 24 C C24 15M . . . C 3 27.183 -14.395 36.672 1 5.39 ? C24 15M 325 A 1 HETATM 25 C C25 15M . . . C 3 27.165 -13.276 37.733 1 4.48 ? C25 15M 325 A 1 HETATM 26 N N 15M . . . C 3 25.995 -12.736 38.107 1 7.18 ? N 15M 325 A 1 HETATM 27 O O1 15M . . . C 3 26.046 -11.145 36.42 1 8.3 ? O1 15M 325 A 1 HETATM 28 O O9 15M . . . C 3 19.494 -13.74 42.27 1 21.49 ? O9 15M 325 A 1 HETATM 29 O O11 15M . . . C 3 16.089 -12.413 39.822 1 20.27 ? O11 15M 325 A 1 HETATM 30 O O15 15M . . . C 3 16.342 -13.489 34.899 1 18.93 ? O15 15M 325 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 30 #